BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0145.p         (76 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001523540.1| chemotaxis protein MotC [Azorhizobium caulin...    34   7.6  

>ref|YP_001523540.1| chemotaxis protein MotC [Azorhizobium caulinodans ORS 571]
 dbj|BAF86622.1| hypothetical MotC chemotaxis protein [Azorhizobium caulinodans ORS
           571]
          Length = 872

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 4   SIIPKDIAVSIEQRTGPLDSQEMRSMRRLVDLIHAAGATGLEPE-MVFAWIED 55
           S  P D A+ +E+ TGPL  +++R ++RL D I       L+ +  + A IED
Sbjct: 377 SPPPPDQAIPVERSTGPLPYEQVRRLQRLQDRIATGDTAALQAQRALIAEIED 429