BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0141.p         (99 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003765168.1| hypothetical protein AMED_2973 [Amycolatopsi...    37   1.4  
ref|XP_003437410.1| unnamed protein product [Podospora anserina ...    36   2.4  
ref|XP_002561885.1| Pc18g00380 [Penicillium chrysogenum Wisconsi...    35   3.2  
ref|ZP_08420570.1| conserved hypothetical protein [Ruminococcace...    35   5.3  

>ref|YP_003765168.1| hypothetical protein AMED_2973 [Amycolatopsis mediterranei U32]
 gb|ADJ44766.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gb|AEK41511.1| hypothetical protein RAM_15115 [Amycolatopsis mediterranei S699]
          Length = 2209

 Score = 36.6 bits (83), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 8    RMIADIGIYALQHYTLQQKQD-LRDHIARIALDLDADIERINAMPKHGLLAYVGKSPDEI 66
            R++ D G++AL  ++ QQ  D L DH     L+++A+I+R  A P   L   VG+   EI
Sbjct: 1001 RLVVDTGLHAL-GWSRQQAIDFLIDHTPMAPLEIEAEIDRYIAWPAQALGYMVGRL--EI 1057

Query: 67   ETIKAEIE 74
            + ++AE E
Sbjct: 1058 QRLRAEAE 1065


>ref|XP_003437410.1| unnamed protein product [Podospora anserina S mat+]
 emb|CAP65495.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1151

 Score = 35.8 bits (81), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 29/51 (56%)

Query: 1   MIIDAHKRMIADIGIYALQHYTLQQKQDLRDHIARIALDLDADIERINAMP 51
           M+ +AH+R IA   ++AL   T++ ++DL+  +    LD D   E  NA P
Sbjct: 622 MLDEAHERTIATDVLFALLKKTMKSRKDLKVIVTSATLDADKFSEYFNACP 672


>ref|XP_002561885.1| Pc18g00380 [Penicillium chrysogenum Wisconsin 54-1255]
 emb|CAP94262.1| Pc18g00380 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1276

 Score = 35.4 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 15  IYALQHYTLQQKQDLRDHIARIALDL-------DADIERINAMPKHGLLAYVGKSPDEIE 67
           I  L  ++  ++ D    +ARI  +L       D+ +ER+  +P +    ++G  PDE +
Sbjct: 672 IICLVRFSAPEQDDQAGGVARIRRNLLDMGLWRDSILERLEILPGNLARPHLGLGPDEFD 731

Query: 68  TIKAEIEAQVHAA 80
            I A ++  VHAA
Sbjct: 732 NIAARVQVIVHAA 744


>ref|ZP_08420570.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
 gb|EGJ45779.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
          Length = 147

 Score = 34.7 bits (78), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 35/53 (66%)

Query: 4   DAHKRMIADIGIYALQHYTLQQKQDLRDHIARIALDLDADIERINAMPKHGLL 56
           D+ +++++ I   + +  T++ KQ+  DHI   ALD++A +E++ ++ + GL+
Sbjct: 79  DSVEKVVSRIQNKSPEKKTVRSKQETHDHIPSTALDVEARLEQLRSLKEAGLM 131