BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0130.p         (159 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001418061.1| predicted protein [Ostreococcus lucimarinus ...    37   1.0  
ref|XP_002551594.1| KLTH0A03146p [Lachancea thermotolerans] >gi|...    36   2.4  
ref|YP_003839536.1| AraC family transcriptional regulator [Caldi...    36   2.4  
ref|ZP_08268946.1| hypothetical protein BDIM_23070 [Brevundimona...    35   3.2  
ref|NP_986160.1| AFR613Cp [Ashbya gossypii ATCC 10895] >gi|44985...    35   3.8  

>ref|XP_001418061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gb|ABO96354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 224

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 97  RQAIDFVRGAMGHVPMALHRFGAR-HRRAKDSPRRRRLTHAKTDDDGAAGMAGLAWAWSD 155
           ++ ++ V     H+ M+LHRFG+R  RR  +   R  L    TDD+G   + G   A S 
Sbjct: 77  KRKVEHVIEETDHLEMSLHRFGSREERRLNEQKEREDLMRRVTDDEGFRSLVGEYDAESG 136

Query: 156 AV 157
           ++
Sbjct: 137 SM 138


>ref|XP_002551594.1| KLTH0A03146p [Lachancea thermotolerans]
 emb|CAR21152.1| KLTH0A03146p [Lachancea thermotolerans]
          Length = 635

 Score = 35.8 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 17/147 (11%)

Query: 12  DKPAALGDWLWQI---LVVELAAL----LDRLTLRKLIALIPVAIVIGAYWHRIPLPPEL 64
           + P +  DW+ Q+    V+E        +DR T+ +    + ++     ++HR+  P  +
Sbjct: 215 NPPTSAEDWISQLDFDKVLEETKRRKRQMDRSTINEYPEFLTLSFEAYCFYHRLEFPAHI 274

Query: 65  ML---VGDVLAY-IDIFSMIFLIGFFTRVATVVAVVRQAIDFVRGAMGHVPMALHRFGAR 120
           +L   +    AY I+  S+ FL GF++R+  +          + G    V      FG R
Sbjct: 275 LLHQPIQLASAYRINYSSINFLYGFYSRLLAISGFS------IEGEPNKVSAPSLLFGIR 328

Query: 121 HRRAKDSPRRRRLTHAKTDDDGAAGMA 147
            + A  S +     H   DD  A G A
Sbjct: 329 TQLANQSEQTLVSKHCLNDDKNAPGSA 355


>ref|YP_003839536.1| AraC family transcriptional regulator [Caldicellulosiruptor
           obsidiansis OB47]
 gb|ADL41550.1| transcriptional regulator, AraC family [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 793

 Score = 35.8 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 27/46 (58%)

Query: 70  VLAYIDIFSMIFLIGFFTRVATVVAVVRQAIDFVRGAMGHVPMALH 115
           VL+Y+ IF++IFLIG +T   T    V+    +    + H+P+ ++
Sbjct: 14  VLSYLAIFALIFLIGLYTYFITYKISVKNLNRYTTSLLNHLPLRVY 59


>ref|ZP_08268946.1| hypothetical protein BDIM_23070 [Brevundimonas diminuta ATCC 11568]
 gb|EGF95468.1| hypothetical protein BDIM_23070 [Brevundimonas diminuta ATCC 11568]
          Length = 170

 Score = 35.4 bits (80), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 22/118 (18%)

Query: 33  LDRLTLRKLIALIPVAIVIGAYWHRIPLPPELMLVGDVLAYIDIFSMIFLIGFFTRVATV 92
           L   TLR ++ +I V ++    W  + L   L   GDVLAY+++ + + L+    R+A  
Sbjct: 67  LSGSTLRLVLVMIGVMML----WQTVGLELALFAAGDVLAYLEVLTAVSLMTAQARLA-- 120

Query: 93  VAVVRQAIDFVRGAMGHVPMALHRFGARHRRAKDSPRRRRL----THAKTDDDGAAGM 146
                     VR AM     AL +     RR K   R RR+      + +D DG AG+
Sbjct: 121 ---------LVRAAMARRVTALMQ---PLRRLKLRSRARRIRPKTPPSSSDADGPAGV 166


>ref|NP_986160.1| AFR613Cp [Ashbya gossypii ATCC 10895]
 gb|AAS53984.1| AFR613Cp [Ashbya gossypii ATCC 10895]
          Length = 490

 Score = 35.0 bits (79), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 12/84 (14%)

Query: 37  TLRKLIALIPVAIVIGAYWHRIPLPPELMLVGDVLAYIDIFSMIFLIGFF--TRVATVVA 94
           T++ ++A+IP           + LP E +   D + Y  I S+I+L G F    V+    
Sbjct: 9   TIKPILAIIP----------EVELPYEKVTFDDKVVYTLIASLIYLFGQFPLAGVSAEAG 58

Query: 95  VVRQAIDFVRGAMGHVPMALHRFG 118
            V+  + F+RG     P  L  FG
Sbjct: 59  AVKDPLFFLRGVFAAEPRTLMEFG 82