BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0126.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630099.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhiz... 463 e-128 ref|NP_772863.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizob... 458 e-127 ref|YP_003453223.1| 3-hydroxybutyryl-CoA dehydrogenase [Azospiri... 441 e-122 ref|YP_001205459.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhi... 425 e-117 ref|YP_001240216.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhi... 403 e-110 >ref|ZP_08630099.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07193.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] Length = 284 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 230/283 (81%), Positives = 246/283 (86%), Gaps = 20/283 (7%) Query: 1 MIETVGIIGAGTMGNGIAQICAAAGLGVTMVDISDAAVQRGLKTVGSSLDRLVAKEKMTA 60 MIETVGIIGAGTMGNGIAQICAAAGL V MVDISDAAV RG+ T+G SLDRLV KEKM+A Sbjct: 1 MIETVGIIGAGTMGNGIAQICAAAGLQVVMVDISDAAVSRGVATIGGSLDRLVKKEKMSA 60 Query: 61 ADRDATLGRINATTDKAKLAACDLVIEAATENEELKIKILKDLCAGLKPSALVATNTSSI 120 DRDA L RIN TTDK+KL++CDLVIEAATENE+LKIKILKDLCA L+P ALVATNTSSI Sbjct: 61 GDRDAALKRINGTTDKSKLSSCDLVIEAATENEDLKIKILKDLCANLQPRALVATNTSSI 120 Query: 121 SITRLAASTDRPDRFIGMHFFNPVPVMALLELIRGLQTSDDTVAKAEAFAKRVGKVAITA 180 S+TRLAA+TDRPDRFIGMHFFNPVPVM LLELIRGLQTSDDT AKA AFA+RVGKVA+TA Sbjct: 121 SVTRLAAATDRPDRFIGMHFFNPVPVMQLLELIRGLQTSDDTHAKALAFAQRVGKVAVTA 180 Query: 181 X--------------------ALQEGIATAEEIDAGMKLGCNHPIGPLALADLIGLDTML 220 AL EGIA+AEEIDAGMKLGCNHPIGPLALAD+IGLDTML Sbjct: 181 KNSPGFAVNRILCPMINEAIFALSEGIASAEEIDAGMKLGCNHPIGPLALADMIGLDTML 240 Query: 221 SVMEVFYTGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFYSYSK 263 SVMEVFYTGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFY+Y+K Sbjct: 241 SVMEVFYTGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFYNYAK 283 >ref|NP_772863.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC51488.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 231/281 (82%), Positives = 242/281 (86%), Gaps = 20/281 (7%) Query: 1 MIETVGIIGAGTMGNGIAQICAAAGLGVTMVDISDAAVQRGLKTVGSSLDRLVAKEKMTA 60 MI+TVGIIGAGTMGNGIAQICAAAGL V MVDISDAAV RGL TVG SL+RLV KEKM+A Sbjct: 1 MIQTVGIIGAGTMGNGIAQICAAAGLSVVMVDISDAAVNRGLSTVGGSLERLVKKEKMSA 60 Query: 61 ADRDATLGRINATTDKAKLAACDLVIEAATENEELKIKILKDLCAGLKPSALVATNTSSI 120 ADR+ATL RI TTD+AKLA CDLVIEAATENEELK+KILKDLCA L P LVATNTSSI Sbjct: 61 ADREATLKRITGTTDRAKLADCDLVIEAATENEELKVKILKDLCATLSPRTLVATNTSSI 120 Query: 121 SITRLAASTDRPDRFIGMHFFNPVPVMALLELIRGLQTSDDTVAKAEAFAKRVGKVAITA 180 SIT+LAA+TDRPDRFIGMHFFNPVPVMALLELIRGLQTSDDT AKA FA+RVGKVAITA Sbjct: 121 SITKLAAATDRPDRFIGMHFFNPVPVMALLELIRGLQTSDDTHAKALDFAQRVGKVAITA 180 Query: 181 X--------------------ALQEGIATAEEIDAGMKLGCNHPIGPLALADLIGLDTML 220 ALQEGIATAEEIDAGMKLGCNHPIGPLALADL+GLDTML Sbjct: 181 KNSPGFAVNRILCPMINEAIFALQEGIATAEEIDAGMKLGCNHPIGPLALADLVGLDTML 240 Query: 221 SVMEVFYTGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFYSY 261 SVMEVFY GFNDPKYRPAPLLKEMVDAGHLGRKTGQGFY+Y Sbjct: 241 SVMEVFYKGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFYTY 281 >ref|YP_003453223.1| 3-hydroxybutyryl-CoA dehydrogenase [Azospirillum sp. B510] dbj|BAI76679.1| 3-hydroxybutyryl-CoA dehydrogenase [Azospirillum sp. B510] Length = 288 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 221/282 (78%), Positives = 238/282 (84%), Gaps = 20/282 (7%) Query: 2 IETVGIIGAGTMGNGIAQICAAAGLGVTMVDISDAAVQRGLKTVGSSLDRLVAKEKMTAA 61 IET+G+IGAGTMGNGIAQ+CA AGL V M DIS+AAVQRGL TVG SLDRLV KEKMTAA Sbjct: 7 IETIGVIGAGTMGNGIAQVCAVAGLTVVMTDISEAAVQRGLSTVGGSLDRLVKKEKMTAA 66 Query: 62 DRDATLGRINATTDKAKLAACDLVIEAATENEELKIKILKDLCAGLKPSALVATNTSSIS 121 DR+ L RI ATTDK+KL CDLVIEAATENE+LKIKILKDLCA LKP ALVATNTSSIS Sbjct: 67 DRETALARITATTDKSKLGTCDLVIEAATENEDLKIKILKDLCALLKPEALVATNTSSIS 126 Query: 122 ITRLAASTDRPDRFIGMHFFNPVPVMALLELIRGLQTSDDTVAKAEAFAKRVGKVAITAX 181 IT+LA +TDRPDRFIG+HFFNPVP+MALLE+IRG+QTSDDT AKA AFAKRVGK ITA Sbjct: 127 ITKLATATDRPDRFIGLHFFNPVPLMALLEIIRGIQTSDDTHAKAMAFAKRVGKSPITAK 186 Query: 182 --------------------ALQEGIATAEEIDAGMKLGCNHPIGPLALADLIGLDTMLS 221 ALQ+GIATAE+IDAGMK GCNHPIGPLALADLIGLDTMLS Sbjct: 187 NSPGFAVNRILCPMINEAIFALQDGIATAEDIDAGMKAGCNHPIGPLALADLIGLDTMLS 246 Query: 222 VMEVFYTGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFYSYSK 263 VMEVFY GFNDPKYRPAPLLKEMVDAG+LGRKTG+GFY YSK Sbjct: 247 VMEVFYEGFNDPKYRPAPLLKEMVDAGYLGRKTGRGFYDYSK 288 >ref|YP_001205459.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL77232.1| 3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) [Bradyrhizobium sp. ORS 278] Length = 283 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/283 (75%), Positives = 231/283 (81%), Gaps = 20/283 (7%) Query: 1 MIETVGIIGAGTMGNGIAQICAAAGLGVTMVDISDAAVQRGLKTVGSSLDRLVAKEKMTA 60 MI+TVGIIGAGTMGNGIAQ+CAAAG+ + MVDIS+ AV RGL TVGSSLDRLV K+KMT Sbjct: 1 MIQTVGIIGAGTMGNGIAQVCAAAGVPIVMVDISEQAVARGLATVGSSLDRLVKKDKMTT 60 Query: 61 ADRDATLGRINATTDKAKLAACDLVIEAATENEELKIKILKDLCAGLKPSALVATNTSSI 120 AD+D L I TTDK KL+ACDLVIEAATENE LK+KIL DLCAGLKP AL+ATNTSSI Sbjct: 61 ADKDKALSLITGTTDKTKLSACDLVIEAATENEALKLKILGDLCAGLKPEALIATNTSSI 120 Query: 121 SITRLAASTDRPDRFIGMHFFNPVPVMALLELIRGLQTSDDTVAKAEAFAKRVGKVAITA 180 SIT+LA +TDRPDRFIGMHFFNPVP+MALLELIRGLQTSD T A A FAKR+GKVAITA Sbjct: 121 SITKLATATDRPDRFIGMHFFNPVPMMALLELIRGLQTSDATHAAAVDFAKRIGKVAITA 180 Query: 181 X--------------------ALQEGIATAEEIDAGMKLGCNHPIGPLALADLIGLDTML 220 A EGIATA +ID GMKLGCNHPIGPLALADLIGLDTML Sbjct: 181 KNSPGFAVNRILCPMINEAIFAYSEGIATAADIDEGMKLGCNHPIGPLALADLIGLDTML 240 Query: 221 SVMEVFYTGFNDPKYRPAPLLKEMVDAGHLGRKTGQGFYSYSK 263 SVMEVFY GFNDPKYRPAPLLKEMV AG LGRKTG+GFY YSK Sbjct: 241 SVMEVFYNGFNDPKYRPAPLLKEMVAAGQLGRKTGKGFYDYSK 283 >ref|YP_001240216.1| 3-hydroxybutyryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ36310.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 271 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/271 (76%), Positives = 223/271 (82%), Gaps = 20/271 (7%) Query: 13 MGNGIAQICAAAGLGVTMVDISDAAVQRGLKTVGSSLDRLVAKEKMTAADRDATLGRINA 72 MGNGIAQ+CAAAG+ + MVDIS+ AV RGL TVGSSLDRLV K+KMTAAD+D L I Sbjct: 1 MGNGIAQVCAAAGVPIVMVDISEQAVARGLATVGSSLDRLVKKDKMTAADKDKALSLITG 60 Query: 73 TTDKAKLAACDLVIEAATENEELKIKILKDLCAGLKPSALVATNTSSISITRLAASTDRP 132 TTDKAKLA+CDLVIEAATENEELK+KIL+DLCAGLKP AL+ATNTSSISIT+LA +TDRP Sbjct: 61 TTDKAKLASCDLVIEAATENEELKLKILRDLCAGLKPEALIATNTSSISITKLATATDRP 120 Query: 133 DRFIGMHFFNPVPVMALLELIRGLQTSDDTVAKAEAFAKRVGKVAITAX----------- 181 DRFIGMHFFNPVP+MALLELIRGLQTSD T A A FAKR+GKVAITA Sbjct: 121 DRFIGMHFFNPVPMMALLELIRGLQTSDATHAAAADFAKRIGKVAITAKNSPGFAVNRIL 180 Query: 182 ---------ALQEGIATAEEIDAGMKLGCNHPIGPLALADLIGLDTMLSVMEVFYTGFND 232 A EGIATA +ID GMKLGCNHPIGPLALADLIGLDTMLSVMEVFY GFND Sbjct: 181 CPMINEAIFAYSEGIATAADIDEGMKLGCNHPIGPLALADLIGLDTMLSVMEVFYNGFND 240 Query: 233 PKYRPAPLLKEMVDAGHLGRKTGQGFYSYSK 263 PKYRPAPLLKEMV AG LGRKTG+GFY YSK Sbjct: 241 PKYRPAPLLKEMVAAGQLGRKTGKGFYDYSK 271