BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0120.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771316.1| hypothetical protein blr4676 [Bradyrhizobium ja... 286 9e-76 ref|YP_001240295.1| putative methionyl-tRNA formyltransferase [B... 273 7e-72 ref|YP_001205953.1| putative methionyl-tRNA formyltransferase [B... 273 9e-72 ref|YP_569741.1| formyl transferase-like [Rhodopseudomonas palus... 259 8e-68 ref|YP_004631916.1| formyltransferase [Oligotropha carboxidovora... 258 2e-67 >ref|NP_771316.1| hypothetical protein blr4676 [Bradyrhizobium japonicum USDA 110] dbj|BAC49941.1| blr4676 [Bradyrhizobium japonicum USDA 110] Length = 195 Score = 286 bits (732), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 145/195 (74%), Positives = 158/195 (81%), Gaps = 21/195 (10%) Query: 1 MRITLVGSRHFGVTTLNMLREHHVTLVRAVVHDG---------------------XLVRA 39 MRITLVGSRHFGVTTLNMLREH V++ R VV D LV A Sbjct: 1 MRITLVGSRHFGVTTLNMLREHSVSIARVVVADAEDRLAATARAAGIEVVVQANPKLVVA 60 Query: 40 AEIAPDTDLIVTAHSHARVSREALAASRLGGIGYHPSLLPRHRGIAAGEWTIKEGDPIAG 99 +EIAPDTDLI+TAHSHAR+ ++ALAA+R GGIGYHPSLLPRHRG AA EWTIKEGDPIAG Sbjct: 61 SEIAPDTDLIITAHSHARIGKDALAAARFGGIGYHPSLLPRHRGKAAVEWTIKEGDPIAG 120 Query: 100 GSIYHLADRMDAGAIAAQDWVFVKKGETARELWERALAPLGLRLLAQVIDYGKVNGSLPA 159 G+IYHLADRMDAGAIAAQDW FVKKGETARELWERALAPLGL+LLA VIDY KV+ +LPA Sbjct: 121 GTIYHLADRMDAGAIAAQDWCFVKKGETARELWERALAPLGLKLLADVIDYVKVHKALPA 180 Query: 160 KVQDEQFATKAPNLS 174 KVQDEQFAT AP+LS Sbjct: 181 KVQDEQFATSAPSLS 195 >ref|YP_001240295.1| putative methionyl-tRNA formyltransferase [Bradyrhizobium sp. BTAi1] gb|ABQ36389.1| putative Methionyl-tRNA formyltransferase [Bradyrhizobium sp. BTAi1] Length = 197 Score = 273 bits (698), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 137/196 (69%), Positives = 155/196 (79%), Gaps = 21/196 (10%) Query: 1 MRITLVGSRHFGVTTLNMLREHHVTLVRAVVHDG---------------------XLVRA 39 MRITLVGSRHFGV TLNMLRE + + R VVHDG +V A Sbjct: 1 MRITLVGSRHFGVATLNMLRERGIEIARVVVHDGEDRLAAAARAAGIEVLVQANPKVVPA 60 Query: 40 AEIAPDTDLIVTAHSHARVSREALAASRLGGIGYHPSLLPRHRGIAAGEWTIKEGDPIAG 99 EIAP TDLIVTAHSHARV++EA+ A+ LGGIGYHPSLLPRHRGIAA EWT+KEGDPIAG Sbjct: 61 NEIAPGTDLIVTAHSHARVTQEAVQAAPLGGIGYHPSLLPRHRGIAAVEWTVKEGDPIAG 120 Query: 100 GSIYHLADRMDAGAIAAQDWVFVKKGETARELWERALAPLGLRLLAQVIDYGKVNGSLPA 159 G+IYHLA+RMDAGAIAAQDW FVKKGETARELWERALAPLGL+L V++Y K +G++PA Sbjct: 121 GTIYHLAERMDAGAIAAQDWCFVKKGETARELWERALAPLGLKLFGDVVEYAKAHGTIPA 180 Query: 160 KVQDEQFATKAPNLSP 175 K QDEQFATKAP+L+P Sbjct: 181 KPQDEQFATKAPSLTP 196 >ref|YP_001205953.1| putative methionyl-tRNA formyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL77728.1| putative Methionyl-tRNA formyltransferase [Bradyrhizobium sp. ORS 278] Length = 197 Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 137/196 (69%), Positives = 156/196 (79%), Gaps = 21/196 (10%) Query: 1 MRITLVGSRHFGVTTLNMLREHHVTLVRAVVHDG---------------------XLVRA 39 MRITLVGSRHFGV TLNMLR+ + + R VVHDG +V A Sbjct: 1 MRITLVGSRHFGVATLNMLRDRGIEIARVVVHDGEDRLAAAARSAGIEVVVQADPKVVPA 60 Query: 40 AEIAPDTDLIVTAHSHARVSREALAASRLGGIGYHPSLLPRHRGIAAGEWTIKEGDPIAG 99 +EIAP TDLIVTAHSHARVS+EA+AA++LGGIGYHPSLLPRHRGIAA EWTIKEGD IAG Sbjct: 61 SEIAPGTDLIVTAHSHARVSQEAVAAAKLGGIGYHPSLLPRHRGIAAVEWTIKEGDAIAG 120 Query: 100 GSIYHLADRMDAGAIAAQDWVFVKKGETARELWERALAPLGLRLLAQVIDYGKVNGSLPA 159 G+IYHLA+RMDAGAIAAQDW FV+KGETARELWERALAPLGL+LL V++ K G++PA Sbjct: 121 GTIYHLAERMDAGAIAAQDWCFVRKGETARELWERALAPLGLKLLGDVVESAKATGTIPA 180 Query: 160 KVQDEQFATKAPNLSP 175 K QDEQFATKAP+L+P Sbjct: 181 KPQDEQFATKAPSLTP 196 >ref|YP_569741.1| formyl transferase-like [Rhodopseudomonas palustris BisB5] gb|ABE39840.1| formyl transferase-like [Rhodopseudomonas palustris BisB5] Length = 196 Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 135/194 (69%), Positives = 150/194 (77%), Gaps = 21/194 (10%) Query: 1 MRITLVGSRHFGVTTLNMLREHHVTLVRAVVHDG---------------------XLVRA 39 MRITLVGSRHFGV TL MLR + + R VV DG LV A Sbjct: 1 MRITLVGSRHFGVATLEMLRGRDIAVPRVVVADGGDRLALAAEAVGIAVTVQASPKLVTA 60 Query: 40 AEIAPDTDLIVTAHSHARVSREALAASRLGGIGYHPSLLPRHRGIAAGEWTIKEGDPIAG 99 AEIAPDTDLIV AHSHARV R+ALAASRLGGIGYHPSLLPRHRGIAA EWTI+EGDPIAG Sbjct: 61 AEIAPDTDLIVAAHSHARVGRDALAASRLGGIGYHPSLLPRHRGIAAVEWTIREGDPIAG 120 Query: 100 GSIYHLADRMDAGAIAAQDWVFVKKGETARELWERALAPLGLRLLAQVIDYGKVNGSLPA 159 G++YHLADRMDAGAIA Q+W FV KGETARELWERALAPLGL LLA+VI++ + + +LPA Sbjct: 121 GTVYHLADRMDAGAIALQEWCFVHKGETARELWERALAPLGLSLLARVIEHARTHTALPA 180 Query: 160 KVQDEQFATKAPNL 173 + QDEQFAT+AP L Sbjct: 181 EPQDEQFATQAPRL 194 >ref|YP_004631916.1| formyltransferase [Oligotropha carboxidovorans OM5] gb|AEI02099.1| putative formyltransferase [Oligotropha carboxidovorans OM4] gb|AEI05675.1| putative formyltransferase [Oligotropha carboxidovorans OM5] Length = 200 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 131/194 (67%), Positives = 149/194 (76%), Gaps = 21/194 (10%) Query: 1 MRITLVGSRHFGVTTLNMLREHHVTLVRAVVHDG---------------------XLVRA 39 MR+TL GSRHFGV TL ML H V + VV DG ++ A Sbjct: 1 MRVTLAGSRHFGVKTLEMLLTHGVEIAGVVVADGDDRLAAAARDAGLNLHVQADPKVIEA 60 Query: 40 AEIAPDTDLIVTAHSHARVSREALAASRLGGIGYHPSLLPRHRGIAAGEWTIKEGDPIAG 99 +EI PDTDLI+TAHSHARVS EALAASRLGGIGYHPSLLPRHRGIAA EWTI+EGDP+ G Sbjct: 61 SEIPPDTDLIITAHSHARVSEEALAASRLGGIGYHPSLLPRHRGIAAVEWTIREGDPVTG 120 Query: 100 GSIYHLADRMDAGAIAAQDWVFVKKGETARELWERALAPLGLRLLAQVIDYGKVNGSLPA 159 G+IYHLA+RMDAGAIAAQ+W FV KGETARELWERALAPLGL+L+A+VID+ K GSLPA Sbjct: 121 GTIYHLAERMDAGAIAAQEWCFVVKGETARELWERALAPLGLKLMARVIDHAKTFGSLPA 180 Query: 160 KVQDEQFATKAPNL 173 K QDE+FAT+AP + Sbjct: 181 KPQDERFATRAPRI 194