BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0117.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771318.1| hypothetical protein bll4678 [Bradyrhizobium ja...   219   2e-55
ref|NP_947993.1| endoribonuclease protein synthesis inhibitor [R...   196   8e-49
ref|YP_004109173.1| endoribonuclease L-PSP [Rhodopseudomonas pal...   194   3e-48
ref|YP_569737.1| endoribonuclease L-PSP [Rhodopseudomonas palust...   193   6e-48
ref|YP_486478.1| endoribonuclease L-PSP [Rhodopseudomonas palust...   192   1e-47

>ref|NP_771318.1| hypothetical protein bll4678 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49943.1| bll4678 [Bradyrhizobium japonicum USDA 110]
          Length = 132

 Score =  219 bits (557), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 121/132 (91%)

Query: 1   MRVLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPEMAAQVGTALKRIVKL 60
           MR+LQPAEW KPRGFSHGV  + PGRW+VLAGQTGGDE G+Y P+MA QV TALKRI+KL
Sbjct: 1   MRILQPAEWKKPRGFSHGVVVEGPGRWVVLAGQTGGDEAGEYAPDMAGQVATALKRIIKL 60

Query: 61  LNEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRAK 120
           L EAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYI GLVD RAK
Sbjct: 61  LGEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIGGLVDDRAK 120

Query: 121 VEIEVTAFVPAA 132
           VEIEVTAFVP+A
Sbjct: 121 VEIEVTAFVPSA 132


>ref|NP_947993.1| endoribonuclease protein synthesis inhibitor [Rhodopseudomonas
           palustris CGA009]
 ref|YP_001991907.1| Endoribonuclease L-PSP [Rhodopseudomonas palustris TIE-1]
 emb|CAE28092.1| Endoribonuclease, protein synthesis inhibitor [Rhodopseudomonas
           palustris CGA009]
 gb|ACF01432.1| Endoribonuclease L-PSP [Rhodopseudomonas palustris TIE-1]
          Length = 133

 Score =  196 bits (499), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 121/132 (91%), Gaps = 1/132 (0%)

Query: 1   MRVLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPE-MAAQVGTALKRIVK 59
           MRVLQP  W+KPRGFSHGVAF+ PG+W+VLAGQTG +++G+Y+ + +AAQVG AL+R+ +
Sbjct: 1   MRVLQPDGWAKPRGFSHGVAFNGPGQWLVLAGQTGTNDQGEYESDDLAAQVGAALRRVTR 60

Query: 60  LLNEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRA 119
           LL EAGAGPEHIVRLTWYLTSR+EYEAAGAGIGAAWKETLGR+FPPSTLLYI GLVD RA
Sbjct: 61  LLAEAGAGPEHIVRLTWYLTSRAEYEAAGAGIGAAWKETLGRHFPPSTLLYIGGLVDPRA 120

Query: 120 KVEIEVTAFVPA 131
           KVE+EVTAFVPA
Sbjct: 121 KVELEVTAFVPA 132


>ref|YP_004109173.1| endoribonuclease L-PSP [Rhodopseudomonas palustris DX-1]
 gb|ADU44440.1| Endoribonuclease L-PSP [Rhodopseudomonas palustris DX-1]
          Length = 133

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/132 (77%), Positives = 120/132 (90%), Gaps = 1/132 (0%)

Query: 1   MRVLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPE-MAAQVGTALKRIVK 59
           MRVLQP  W+KPRGFSHGVAF  PG+W+VLAGQTG +++G+Y+ + +AAQVG AL+R+++
Sbjct: 1   MRVLQPNGWAKPRGFSHGVAFSGPGQWLVLAGQTGTNDQGEYESDDLAAQVGAALRRVIR 60

Query: 60  LLNEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRA 119
           LL +AGAGPEHIVRLTWYLTSR+EYEAAGAGIGAAW ETLGR+FPPSTLLYI GLVD RA
Sbjct: 61  LLADAGAGPEHIVRLTWYLTSRAEYEAAGAGIGAAWMETLGRHFPPSTLLYIGGLVDARA 120

Query: 120 KVEIEVTAFVPA 131
           KVE+EVTAFVPA
Sbjct: 121 KVELEVTAFVPA 132


>ref|YP_569737.1| endoribonuclease L-PSP [Rhodopseudomonas palustris BisB5]
 gb|ABE39836.1| Endoribonuclease L-PSP [Rhodopseudomonas palustris BisB5]
          Length = 133

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 102/132 (77%), Positives = 117/132 (88%), Gaps = 1/132 (0%)

Query: 1   MRVLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPE-MAAQVGTALKRIVK 59
           MR LQPA+WSKPRGFSHGVAF  PG+W+VLAGQTG ++ G+Y+ + +AAQVG ALKRIV 
Sbjct: 1   MRTLQPADWSKPRGFSHGVAFIGPGQWLVLAGQTGTNDNGEYESDDLAAQVGAALKRIVT 60

Query: 60  LLNEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRA 119
           LL EAGAGP+HIVRLTWYLTSR +Y AAGAGI AAW++TLGR+FPPSTLLYI GLV+ RA
Sbjct: 61  LLAEAGAGPQHIVRLTWYLTSRDDYAAAGAGIAAAWRDTLGRHFPPSTLLYISGLVNPRA 120

Query: 120 KVEIEVTAFVPA 131
           KVEIEVTAFVPA
Sbjct: 121 KVEIEVTAFVPA 132


>ref|YP_486478.1| endoribonuclease L-PSP [Rhodopseudomonas palustris HaA2]
 gb|ABD07567.1| Endoribonuclease L-PSP [Rhodopseudomonas palustris HaA2]
          Length = 133

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 115/132 (87%), Gaps = 1/132 (0%)

Query: 1   MRVLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPE-MAAQVGTALKRIVK 59
           MR LQPA+W+KPRGFSHGVAF  PG+W+VLAGQTG ++KG+Y+ + +A QVG ALKRIV 
Sbjct: 1   MRTLQPADWAKPRGFSHGVAFIGPGQWLVLAGQTGTNDKGEYESDDLADQVGAALKRIVT 60

Query: 60  LLNEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRA 119
           LL EA AGPEHIVRLTWYLTSR +Y AAG GI AAW++TLGR+FPPSTLLYI GLVD RA
Sbjct: 61  LLAEAAAGPEHIVRLTWYLTSREDYAAAGPGIAAAWRDTLGRHFPPSTLLYISGLVDPRA 120

Query: 120 KVEIEVTAFVPA 131
           KVEIEVTAFVPA
Sbjct: 121 KVEIEVTAFVPA 132