BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0114.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771322.1| cysteine synthase [Bradyrhizobium japonicum USD... 531 e-149 ref|YP_577047.1| cysteine synthases [Nitrobacter hamburgensis X1... 527 e-148 ref|YP_781691.1| cysteine synthase [Rhodopseudomonas palustris B... 523 e-146 ref|ZP_08629782.1| cysteine synthase [Bradyrhizobiaceae bacteriu... 514 e-144 ref|ZP_07027161.1| cysteine synthase [Afipia sp. 1NLS2] >gi|2985... 513 e-143 >ref|NP_771322.1| cysteine synthase [Bradyrhizobium japonicum USDA 110] dbj|BAC49947.1| cysteine synthase [Bradyrhizobium japonicum USDA 110] Length = 325 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 289/325 (88%), Positives = 307/325 (94%), Gaps = 1/325 (0%) Query: 1 MDAPSTTSAV-QPGRGRVFDSIVDAIGSTPIVRLRRLPQAAGVNATILAKLEYFNPAASV 59 MDA S T A QPGRGR++DSIV+A G TPIVRLRRLP GVNATILAKLEYFNPAASV Sbjct: 1 MDASSATRAAHQPGRGRIYDSIVEAFGDTPIVRLRRLPGMHGVNATILAKLEYFNPAASV 60 Query: 60 KDRIGAAMIVAMEKAGIINADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIERR 119 KDRIGAAMI+AMEKAGI+ DTVLIEPTSGNTGIALA+VAASRGYRLKLVMPESMSIERR Sbjct: 61 KDRIGAAMIIAMEKAGIVKPDTVLIEPTSGNTGIALAFVAASRGYRLKLVMPESMSIERR 120 Query: 120 RMLAFLGAEIVLTPAAQGMKGSIATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEEIW 179 +MLAFLGAE+VLTPAAQGMKG+IA AEELV+TTPN+VMPQQFKNLANPEVHRRTTAEEIW Sbjct: 121 KMLAFLGAELVLTPAAQGMKGAIAAAEELVKTTPNSVMPQQFKNLANPEVHRRTTAEEIW 180 Query: 180 NDTGGNIDYFVAGVGTGGTITGVGQVLKPRKPSLRVVAVEPEESPVLSGGQHTPHKIQGI 239 NDT GNID+FVAGVGTGGTITGVGQVLKPRK SLRVVAVEPEESPVLSGGQHTPHKIQGI Sbjct: 181 NDTDGNIDFFVAGVGTGGTITGVGQVLKPRKASLRVVAVEPEESPVLSGGQHTPHKIQGI 240 Query: 240 GAGFIPDILDRSVIDEIVKVNSATAIETARELARNEGIPGGISSGAAIAAALQIGRRPEA 299 GAGF+PDILDRSVIDEIVK+NS TAIET+R LAR+EGIPGGISSGAAIAAALQIG+RPEA Sbjct: 241 GAGFVPDILDRSVIDEIVKINSTTAIETSRALARHEGIPGGISSGAAIAAALQIGQRPEA 300 Query: 300 AGKTILAIVPSFSERYLSTVLFEGI 324 AGKTILA+VPSFSERYLST LFEGI Sbjct: 301 AGKTILAVVPSFSERYLSTALFEGI 325 >ref|YP_577047.1| cysteine synthases [Nitrobacter hamburgensis X14] gb|ABE62587.1| cysteine synthase [Nitrobacter hamburgensis X14] Length = 325 Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust. Identities = 279/325 (85%), Positives = 304/325 (93%), Gaps = 1/325 (0%) Query: 1 MDAPSTTSAVQ-PGRGRVFDSIVDAIGSTPIVRLRRLPQAAGVNATILAKLEYFNPAASV 59 MD S T A + GRGRVFDSIVD +G TPIVRLRRLPQ GVNATILAKLEYFNPAASV Sbjct: 1 MDTQSNTDASRRAGRGRVFDSIVDTVGDTPIVRLRRLPQQHGVNATILAKLEYFNPAASV 60 Query: 60 KDRIGAAMIVAMEKAGIINADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIERR 119 KDRIGAAM++AMEKAG I+ADTVLIEPTSGNTGIALA+VAASRGYRLKLVMPES+S ER Sbjct: 61 KDRIGAAMVIAMEKAGKIHADTVLIEPTSGNTGIALAFVAASRGYRLKLVMPESVSTERC 120 Query: 120 RMLAFLGAEIVLTPAAQGMKGSIATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEEIW 179 +MLAFLGAEIVLTPAA+GM+GSIA AEELVRTTP+AVMPQQFKNLANPE+HRRTTAEEIW Sbjct: 121 KMLAFLGAEIVLTPAAEGMRGSIAMAEELVRTTPHAVMPQQFKNLANPEIHRRTTAEEIW 180 Query: 180 NDTGGNIDYFVAGVGTGGTITGVGQVLKPRKPSLRVVAVEPEESPVLSGGQHTPHKIQGI 239 NDTGGNIDY VAGVGTGGTITG+GQ LKPRKP+LR+VAVEPEES VLSGG+H+PHKIQGI Sbjct: 181 NDTGGNIDYIVAGVGTGGTITGIGQALKPRKPALRIVAVEPEESAVLSGGRHSPHKIQGI 240 Query: 240 GAGFIPDILDRSVIDEIVKVNSATAIETARELARNEGIPGGISSGAAIAAALQIGRRPEA 299 GAGFIPDILDRSVIDE+VKV+SATA+ETAR LARNEGIPGGISSGAA+AAAL IG+RPE+ Sbjct: 241 GAGFIPDILDRSVIDEVVKVDSATALETARALARNEGIPGGISSGAAVAAALAIGKRPES 300 Query: 300 AGKTILAIVPSFSERYLSTVLFEGI 324 AG+TILA+VPSFSERYLST LFEGI Sbjct: 301 AGRTILAVVPSFSERYLSTALFEGI 325 >ref|YP_781691.1| cysteine synthase [Rhodopseudomonas palustris BisA53] gb|ABJ06711.1| cysteine synthase [Rhodopseudomonas palustris BisA53] Length = 326 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 287/323 (88%), Positives = 306/323 (94%), Gaps = 3/323 (0%) Query: 5 STTSAVQ---PGRGRVFDSIVDAIGSTPIVRLRRLPQAAGVNATILAKLEYFNPAASVKD 61 S+++AV PGRGRVFDSIVDAIG TPIVRLRRLPQ GV+ATILAKLEYFNPA SVKD Sbjct: 4 SSSNAVHARAPGRGRVFDSIVDAIGDTPIVRLRRLPQQHGVSATILAKLEYFNPATSVKD 63 Query: 62 RIGAAMIVAMEKAGIINADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIERRRM 121 RIGAAMI AME+AGI+NADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIERR+M Sbjct: 64 RIGAAMIQAMEQAGIVNADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIERRKM 123 Query: 122 LAFLGAEIVLTPAAQGMKGSIATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEEIWND 181 LAFLGAE+VLTPAAQGMKG+IATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEEIWND Sbjct: 124 LAFLGAELVLTPAAQGMKGAIATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEEIWND 183 Query: 182 TGGNIDYFVAGVGTGGTITGVGQVLKPRKPSLRVVAVEPEESPVLSGGQHTPHKIQGIGA 241 TGG IDYFVAGVGTGGTITGVGQVLK R+P L+VVAVEPEESPVLSGG HTPHKIQGIGA Sbjct: 184 TGGQIDYFVAGVGTGGTITGVGQVLKSRRPGLKVVAVEPEESPVLSGGTHTPHKIQGIGA 243 Query: 242 GFIPDILDRSVIDEIVKVNSATAIETARELARNEGIPGGISSGAAIAAALQIGRRPEAAG 301 GF+PDILDR+VIDEI+K+NS TAIET+R LARNEGI GGISSGAAIAAAL+IG+RPE+AG Sbjct: 244 GFVPDILDRAVIDEIIKINSVTAIETSRALARNEGIAGGISSGAAIAAALEIGKRPESAG 303 Query: 302 KTILAIVPSFSERYLSTVLFEGI 324 KTILAIVPSFSERYLST LFEGI Sbjct: 304 KTILAIVPSFSERYLSTALFEGI 326 >ref|ZP_08629782.1| cysteine synthase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07637.1| cysteine synthase [Bradyrhizobiaceae bacterium SG-6C] Length = 327 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 279/327 (85%), Positives = 305/327 (93%), Gaps = 3/327 (0%) Query: 1 MDAPSTTSAV---QPGRGRVFDSIVDAIGSTPIVRLRRLPQAAGVNATILAKLEYFNPAA 57 MDA S ++A+ PGRGR++DSIVDA G TPIVRLRRLP+ GV ATILAKLEYFNPAA Sbjct: 1 MDAKSQSNALPARAPGRGRIYDSIVDAFGDTPIVRLRRLPEQNGVKATILAKLEYFNPAA 60 Query: 58 SVKDRIGAAMIVAMEKAGIINADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIE 117 SVKDRIGAAMI+AMEKAG+IN DTVLIEPTSGNTGIALA+VAASRGYRLKLVMPESMSIE Sbjct: 61 SVKDRIGAAMIIAMEKAGVINQDTVLIEPTSGNTGIALAFVAASRGYRLKLVMPESMSIE 120 Query: 118 RRRMLAFLGAEIVLTPAAQGMKGSIATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEE 177 RR+MLAFLGAEIVLTPAAQGMKG+IATAEEL+R TPN+VMPQQFKNLANP+VHRRTTAEE Sbjct: 121 RRKMLAFLGAEIVLTPAAQGMKGAIATAEELIRNTPNSVMPQQFKNLANPDVHRRTTAEE 180 Query: 178 IWNDTGGNIDYFVAGVGTGGTITGVGQVLKPRKPSLRVVAVEPEESPVLSGGQHTPHKIQ 237 IWNDT G+ID FVAGVGTGGTITGVGQ+LK RKPS+RVVAVEP ESPVLSGGQH+PHKIQ Sbjct: 181 IWNDTHGDIDVFVAGVGTGGTITGVGQILKQRKPSVRVVAVEPVESPVLSGGQHSPHKIQ 240 Query: 238 GIGAGFIPDILDRSVIDEIVKVNSATAIETARELARNEGIPGGISSGAAIAAALQIGRRP 297 GIGAGF+PDILDRSVIDEIVK++SATAI T+R LAR EGIPGGISSGAAIAAAL++G+RP Sbjct: 241 GIGAGFVPDILDRSVIDEIVKIDSATAIATSRALARAEGIPGGISSGAAIAAALELGKRP 300 Query: 298 EAAGKTILAIVPSFSERYLSTVLFEGI 324 E AGKTILAI+PSFSERYLST LFEGI Sbjct: 301 ENAGKTILAIIPSFSERYLSTALFEGI 327 >ref|ZP_07027161.1| cysteine synthase [Afipia sp. 1NLS2] gb|EFI52004.1| cysteine synthase [Afipia sp. 1NLS2] Length = 326 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 266/326 (81%), Positives = 293/326 (89%), Gaps = 2/326 (0%) Query: 1 MDAP--STTSAVQPGRGRVFDSIVDAIGSTPIVRLRRLPQAAGVNATILAKLEYFNPAAS 58 M++P T S GRG ++DSIVDA G TPIVRLRRLP+ GV ATILAKLEYFNPAAS Sbjct: 1 MNSPPDKTASQCHIGRGGIYDSIVDAAGCTPIVRLRRLPEQHGVKATILAKLEYFNPAAS 60 Query: 59 VKDRIGAAMIVAMEKAGIINADTVLIEPTSGNTGIALAYVAASRGYRLKLVMPESMSIER 118 VKDRIGAAM+ AME+AG IN DTVLIEPTSGNTGIALA+VAASRGYRLKLVMP+SMSIER Sbjct: 61 VKDRIGAAMVKAMEEAGAINKDTVLIEPTSGNTGIALAFVAASRGYRLKLVMPDSMSIER 120 Query: 119 RRMLAFLGAEIVLTPAAQGMKGSIATAEELVRTTPNAVMPQQFKNLANPEVHRRTTAEEI 178 R+MLAFLGAEIVLTPAAQGM G+IATAEELVRTTPNAVMPQQFKN ANP VHR+TTAEEI Sbjct: 121 RKMLAFLGAEIVLTPAAQGMNGAIATAEELVRTTPNAVMPQQFKNPANPAVHRQTTAEEI 180 Query: 179 WNDTGGNIDYFVAGVGTGGTITGVGQVLKPRKPSLRVVAVEPEESPVLSGGQHTPHKIQG 238 WNDT GN+D FVAGVGTGGTITGVGQVLKPRKPSLR+VAVEP ESPVLSGG+H+PHKIQG Sbjct: 181 WNDTAGNLDIFVAGVGTGGTITGVGQVLKPRKPSLRIVAVEPAESPVLSGGKHSPHKIQG 240 Query: 239 IGAGFIPDILDRSVIDEIVKVNSATAIETARELARNEGIPGGISSGAAIAAALQIGRRPE 298 +GAGF+PDILDRSVIDE+V VNS AIE +R LAR EGI GGISSGAA+AAAL++G+RPE Sbjct: 241 LGAGFVPDILDRSVIDEVVTVNSTAAIEMSRSLARMEGIAGGISSGAAVAAALELGKRPE 300 Query: 299 AAGKTILAIVPSFSERYLSTVLFEGI 324 AGK IL ++PSF+ERYLSTVLFEGI Sbjct: 301 NAGKMILTVIPSFAERYLSTVLFEGI 326