BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0113.p         (71 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_532462.1| hypothetical protein RPC_2593 [Rhodopseudomonas...   125   2e-27
ref|YP_569734.1| hypothetical protein RPD_2604 [Rhodopseudomonas...   124   6e-27
ref|YP_004109176.1| hypothetical protein Rpdx1_2860 [Rhodopseudo...   120   5e-26
ref|YP_001991904.1| hypothetical protein Rpal_2921 [Rhodopseudom...   119   1e-25
ref|YP_486481.1| hypothetical protein RPB_2868 [Rhodopseudomonas...   119   1e-25

>ref|YP_532462.1| hypothetical protein RPC_2593 [Rhodopseudomonas palustris BisB18]
 gb|ABD88143.1| hypothetical protein RPC_2593 [Rhodopseudomonas palustris BisB18]
          Length = 121

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 63/71 (88%)

Query: 1   MPALAEVLSTTASRPDPRGSDLPTCPVCADSMVAAEASAYLFDNLISYLWTCDNCGYGFV 60
           MPALAEVLST A RP PRGSDLPTCPVCADSMVAAEASA++ DN+ISYLW+CD CGYGFV
Sbjct: 51  MPALAEVLSTNAPRPAPRGSDLPTCPVCADSMVAAEASAFVADNVISYLWSCDTCGYGFV 110

Query: 61  TKHAVKPIVCN 71
           TKHAVK   CN
Sbjct: 111 TKHAVKRFSCN 121


>ref|YP_569734.1| hypothetical protein RPD_2604 [Rhodopseudomonas palustris BisB5]
 gb|ABE39833.1| hypothetical protein RPD_2604 [Rhodopseudomonas palustris BisB5]
          Length = 124

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 64/71 (90%)

Query: 1   MPALAEVLSTTASRPDPRGSDLPTCPVCADSMVAAEASAYLFDNLISYLWTCDNCGYGFV 60
           MPA+AEVLST ASRP PRGSDLPTCPVCADSMVAAEASA++ ++++SYLWTCD CGYGFV
Sbjct: 54  MPAIAEVLSTKASRPAPRGSDLPTCPVCADSMVAAEASAFVKESIVSYLWTCDTCGYGFV 113

Query: 61  TKHAVKPIVCN 71
           TKH++K   CN
Sbjct: 114 TKHSLKRFACN 124


>ref|YP_004109176.1| hypothetical protein Rpdx1_2860 [Rhodopseudomonas palustris DX-1]
 gb|ADU44443.1| hypothetical protein Rpdx1_2860 [Rhodopseudomonas palustris DX-1]
          Length = 71

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 62/71 (87%)

Query: 1  MPALAEVLSTTASRPDPRGSDLPTCPVCADSMVAAEASAYLFDNLISYLWTCDNCGYGFV 60
          MPA+AEVLST   RP PRGSDLPTCPVCADSMVAAEASAYL ++++SYLWTCD CGYGFV
Sbjct: 1  MPAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFV 60

Query: 61 TKHAVKPIVCN 71
          TKH+VK   CN
Sbjct: 61 TKHSVKRFSCN 71


>ref|YP_001991904.1| hypothetical protein Rpal_2921 [Rhodopseudomonas palustris TIE-1]
 gb|ACF01429.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 71

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 61/71 (85%)

Query: 1  MPALAEVLSTTASRPDPRGSDLPTCPVCADSMVAAEASAYLFDNLISYLWTCDNCGYGFV 60
          MPA+AEVLST   RP PRGSDLPTCPVCADSMVAAEASAYL ++++SYLWTCD CGYGFV
Sbjct: 1  MPAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFV 60

Query: 61 TKHAVKPIVCN 71
          TKH VK   CN
Sbjct: 61 TKHLVKRFSCN 71


>ref|YP_486481.1| hypothetical protein RPB_2868 [Rhodopseudomonas palustris HaA2]
 gb|ABD07570.1| hypothetical protein RPB_2868 [Rhodopseudomonas palustris HaA2]
          Length = 71

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 63/71 (88%)

Query: 1  MPALAEVLSTTASRPDPRGSDLPTCPVCADSMVAAEASAYLFDNLISYLWTCDNCGYGFV 60
          MPA+AEVLST A RP PRG+DLPTCPVCADSMVAAEASA+L ++++SYLWTCD CGYGFV
Sbjct: 1  MPAIAEVLSTNAPRPAPRGNDLPTCPVCADSMVAAEASAFLTESIVSYLWTCDTCGYGFV 60

Query: 61 TKHAVKPIVCN 71
          TKH++K   CN
Sbjct: 61 TKHSMKRFACN 71