BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0107.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08629779.1| S-adenosylmethionine:tRNA ribosyltransferase-... 612 e-173 ref|NP_771329.1| S-adenosylmethionine:tRNA ribosyltransferase-is... 610 e-172 ref|YP_001240314.1| S-adenosylmethionine:tRNA ribosyltransferase... 602 e-170 ref|YP_577044.1| S-adenosylmethionine:tRNA ribosyltransferase-is... 599 e-169 ref|YP_001205970.1| S-adenosylmethionine:tRNA ribosyltransferase... 597 e-168 >ref|ZP_08629779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bradyrhizobiaceae bacterium SG-6C] Length = 373 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 293/355 (82%), Positives = 324/355 (91%) Query: 1 MRTDLFDFELPPESIALRPASPRDAARMLVVHPDGVLRDAAIADLPRWLEPGDQIVVNDT 60 MRTDLFDFELP +IALRP SPRDAARMLVV PD L DA ++DLPR+L+PGDQ+VVNDT Sbjct: 16 MRTDLFDFELPEANIALRPVSPRDAARMLVVKPDQPLIDAIVSDLPRFLQPGDQLVVNDT 75 Query: 61 KVIAAQLRGRRIGRDTEPKIEATLIKRLDGSRWQALVKPAKKLSPGDTIRFGNEGRVCLL 120 KVI AQL GRRIGR+TEPKIEATLIKR DGSRWQALVKPAKKL+ GD IRFGNEGRVCLL Sbjct: 76 KVIPAQLTGRRIGRETEPKIEATLIKRFDGSRWQALVKPAKKLAQGDVIRFGNEGRVCLL 135 Query: 121 GNLDAEVEAKGQEGEVTLSFSFHGPVLDQAIADVGATPLPPYIASKRTPDEKDVSDYQTM 180 GNLDA+VE KG+ GEVTLSFSFHGP+LDQAIADVGA PLPPYIAS+RTPDE+D +DYQTM Sbjct: 136 GNLDAQVEHKGENGEVTLSFSFHGPILDQAIADVGAPPLPPYIASRRTPDERDNADYQTM 195 Query: 181 FAANEGAVAAPTAGLHFTPALEAALKSRGVELHRLTLHVGAGTFLPVKTEETSEHKMHAE 240 FA +EGAVAAPTAGLHFTP LEAAL++RGV LHR+TLHVGAGTFLPVK ++T+EHKMHAE Sbjct: 196 FAVSEGAVAAPTAGLHFTPGLEAALRARGVGLHRVTLHVGAGTFLPVKADDTAEHKMHAE 255 Query: 241 WGCITAETASALNAARARGGRIVAIGTTSLRLLESAASADGTIEPFAAETSIFITPGYRF 300 WG ++ ETA+ALN ARA+G RIVA+GTTSLRLLESAA+ DGTI+PF AET+IFITPGYRF Sbjct: 256 WGTVSVETATALNEARAKGARIVAVGTTSLRLLESAAADDGTIKPFTAETAIFITPGYRF 315 Query: 301 RAVDILLTNFHLPRSTLFMLVSAFSGLETMQRAYTHAIKDGYRFYSYGDACLLFR 355 RAVDIL+TNFHLPRSTLFMLVSAFSGLETMQ+AY HAI GYRFYSYGDA LLFR Sbjct: 316 RAVDILMTNFHLPRSTLFMLVSAFSGLETMQQAYAHAIGSGYRFYSYGDASLLFR 370 >ref|NP_771329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bradyrhizobium japonicum USDA 110] sp|Q89L59.1|QUEA_BRAJA RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; AltName: Full=Queuosine biosynthesis protein queA dbj|BAC49954.1| S-adenosylmethionine tRNA ribosyltransferase [Bradyrhizobium japonicum USDA 110] Length = 366 Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust. Identities = 298/358 (83%), Positives = 326/358 (91%), Gaps = 1/358 (0%) Query: 1 MRTDLFDFELPPESIALRPASPRDAARMLVVHPDGVLRDAAIADLPRWLEPGDQIVVNDT 60 MRTDLFDF+LP E IALRPASPRD+A+MLVV G LRD I++LP+WL+ GDQ+VVNDT Sbjct: 1 MRTDLFDFDLPAERIALRPASPRDSAKMLVVE-GGALRDRTISELPQWLKRGDQLVVNDT 59 Query: 61 KVIAAQLRGRRIGRDTEPKIEATLIKRLDGSRWQALVKPAKKLSPGDTIRFGNEGRVCLL 120 KVIAAQL+GRRIGR+TEPKIEATLIKRLDGSRWQALVKPAKKL GD IRFGNEG+VCLL Sbjct: 60 KVIAAQLKGRRIGRETEPKIEATLIKRLDGSRWQALVKPAKKLIAGDRIRFGNEGKVCLL 119 Query: 121 GNLDAEVEAKGQEGEVTLSFSFHGPVLDQAIADVGATPLPPYIASKRTPDEKDVSDYQTM 180 G+LDAEVEAKG EGEVTLSFSFHGP LDQAIAD+G+ PLPPYIASKRTPD++D +DYQTM Sbjct: 120 GHLDAEVEAKGSEGEVTLSFSFHGPALDQAIADLGSPPLPPYIASKRTPDDQDFADYQTM 179 Query: 181 FAANEGAVAAPTAGLHFTPALEAALKSRGVELHRLTLHVGAGTFLPVKTEETSEHKMHAE 240 FAANEGAVAAPTAGLHFTPALE AL+ RGV L+R+TLHVGAGTFLPVK E+T+ HKMHAE Sbjct: 180 FAANEGAVAAPTAGLHFTPALEQALRERGVGLNRVTLHVGAGTFLPVKVEDTAGHKMHAE 239 Query: 241 WGCITAETASALNAARARGGRIVAIGTTSLRLLESAASADGTIEPFAAETSIFITPGYRF 300 WG I+AETA LN AR GGRI+A+GTTSLRLLESAAS DGTI+PFAAETSIFITPGYRF Sbjct: 240 WGTISAETAERLNIARHNGGRIIAVGTTSLRLLESAASEDGTIQPFAAETSIFITPGYRF 299 Query: 301 RAVDILLTNFHLPRSTLFMLVSAFSGLETMQRAYTHAIKDGYRFYSYGDACLLFRARG 358 RAVDILLTNFHLP+STLFMLVSAFSGLETM+RAY HAI GYRFYSYGDACLLFRA G Sbjct: 300 RAVDILLTNFHLPKSTLFMLVSAFSGLETMRRAYAHAIAQGYRFYSYGDACLLFRAGG 357 >ref|YP_001240314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bradyrhizobium sp. BTAi1] sp|A5EJR4.1|QUEA_BRASB RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; AltName: Full=Queuosine biosynthesis protein queA gb|ABQ36408.1| S-adenosylmethionine [Bradyrhizobium sp. BTAi1] Length = 364 Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust. Identities = 291/355 (81%), Positives = 320/355 (90%) Query: 1 MRTDLFDFELPPESIALRPASPRDAARMLVVHPDGVLRDAAIADLPRWLEPGDQIVVNDT 60 MRTDLFDF LPPE+IALRPASPR+AARMLVV DGVLRD +ADLP WLEPGDQ+VVNDT Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGDGVLRDRIVADLPDWLEPGDQLVVNDT 60 Query: 61 KVIAAQLRGRRIGRDTEPKIEATLIKRLDGSRWQALVKPAKKLSPGDTIRFGNEGRVCLL 120 KVIAAQL GRR+ R+TE KIEATLIKRLDGSRWQALV+PAKKL+PGDTIRFG+EG+VCLL Sbjct: 61 KVIAAQLSGRRVSRETEAKIEATLIKRLDGSRWQALVRPAKKLAPGDTIRFGHEGKVCLL 120 Query: 121 GNLDAEVEAKGQEGEVTLSFSFHGPVLDQAIADVGATPLPPYIASKRTPDEKDVSDYQTM 180 G+LDA VEAKG+EGEVTLSF FHGP LDQAIAD+G PLPPYIA KR DE+D +DYQTM Sbjct: 121 GHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQDAADYQTM 180 Query: 181 FAANEGAVAAPTAGLHFTPALEAALKSRGVELHRLTLHVGAGTFLPVKTEETSEHKMHAE 240 FAA EGAVAAPTAGLHFTPALE L++RGV L R+TLHVGAGTFLPVK E+T H+MHAE Sbjct: 181 FAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTEGHRMHAE 240 Query: 241 WGCITAETASALNAARARGGRIVAIGTTSLRLLESAASADGTIEPFAAETSIFITPGYRF 300 WG ++AETA+ALN ARA+GGRIVA+GTTS+RLLESAA DGTI PF AETSIFITPGYRF Sbjct: 241 WGSLSAETAAALNEARAKGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIFITPGYRF 300 Query: 301 RAVDILLTNFHLPRSTLFMLVSAFSGLETMQRAYTHAIKDGYRFYSYGDACLLFR 355 RAVDIL+TNFHLPRSTLFMLVSAF+GLETMQ AY HAI+ GYRFYSYGDACLLFR Sbjct: 301 RAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIRSGYRFYSYGDACLLFR 355 >ref|YP_577044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter hamburgensis X14] gb|ABE62584.1| Queuosine biosynthesis protein [Nitrobacter hamburgensis X14] Length = 365 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 285/354 (80%), Positives = 317/354 (89%) Query: 1 MRTDLFDFELPPESIALRPASPRDAARMLVVHPDGVLRDAAIADLPRWLEPGDQIVVNDT 60 MRTDLFDFELP ESIALRPASPRD+ARMLVV P L D ++DLP+WL PGDQ+VVNDT Sbjct: 6 MRTDLFDFELPSESIALRPASPRDSARMLVVQPGAGLHDQRVSDLPKWLRPGDQLVVNDT 65 Query: 61 KVIAAQLRGRRIGRDTEPKIEATLIKRLDGSRWQALVKPAKKLSPGDTIRFGNEGRVCLL 120 +VIAAQLRGRRIGRD EP+IEATLIKRLDGSRW ALVKPA+KL GD +RFGNEGRVC L Sbjct: 66 RVIAAQLRGRRIGRDAEPRIEATLIKRLDGSRWNALVKPARKLIAGDIVRFGNEGRVCFL 125 Query: 121 GNLDAEVEAKGQEGEVTLSFSFHGPVLDQAIADVGATPLPPYIASKRTPDEKDVSDYQTM 180 G+LDA+VE+KG+EGEVT +FSFHGP LDQAIAD+G+ PLPPYIASKR PD++DV+DYQTM Sbjct: 126 GHLDAQVESKGEEGEVTFAFSFHGPTLDQAIADLGSPPLPPYIASKREPDDRDVADYQTM 185 Query: 181 FAANEGAVAAPTAGLHFTPALEAALKSRGVELHRLTLHVGAGTFLPVKTEETSEHKMHAE 240 FA +EGAVAAPTAGLHFTPA+EA L+ RGV LHRLTLHVGAGTFLPVKTE+T H+MH+E Sbjct: 186 FAVHEGAVAAPTAGLHFTPAVEAVLRERGVGLHRLTLHVGAGTFLPVKTEDTVGHRMHSE 245 Query: 241 WGCITAETASALNAARARGGRIVAIGTTSLRLLESAASADGTIEPFAAETSIFITPGYRF 300 WG I+AETA ALNAARA GGRIVA+GTTSLRLLESA + DG I PF ET+IFITPGYRF Sbjct: 246 WGTISAETADALNAARASGGRIVAVGTTSLRLLESATADDGRIAPFTGETAIFITPGYRF 305 Query: 301 RAVDILLTNFHLPRSTLFMLVSAFSGLETMQRAYTHAIKDGYRFYSYGDACLLF 354 RAVDIL+TNFHLPRSTLFMLVSAFSGLETM++AY HAI GYRFYSYGDACLLF Sbjct: 306 RAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAIAAGYRFYSYGDACLLF 359 >ref|YP_001205970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bradyrhizobium sp. ORS 278] sp|A4YV19.1|QUEA_BRASO RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; AltName: Full=Queuosine biosynthesis protein queA emb|CAL77745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bradyrhizobium sp. ORS 278] Length = 364 Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust. Identities = 291/355 (81%), Positives = 314/355 (88%) Query: 1 MRTDLFDFELPPESIALRPASPRDAARMLVVHPDGVLRDAAIADLPRWLEPGDQIVVNDT 60 MRTDLFDF LPPE+IALRPASPR+AARMLVV DGVLRD I DLP WLEPGDQ+VVNDT Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGDGVLRDRTIGDLPDWLEPGDQLVVNDT 60 Query: 61 KVIAAQLRGRRIGRDTEPKIEATLIKRLDGSRWQALVKPAKKLSPGDTIRFGNEGRVCLL 120 KVIAAQL GRRI R+TE KIEATLIKRLDGSRWQALV+PAKKL GDTIRFGNEG+VCLL Sbjct: 61 KVIAAQLSGRRISRETEAKIEATLIKRLDGSRWQALVRPAKKLLAGDTIRFGNEGKVCLL 120 Query: 121 GNLDAEVEAKGQEGEVTLSFSFHGPVLDQAIADVGATPLPPYIASKRTPDEKDVSDYQTM 180 G+LDA VEAKG+EGEVTLSF FHGP LDQAIAD+G PLPPYIA KR DE+D DYQTM Sbjct: 121 GHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQDAQDYQTM 180 Query: 181 FAANEGAVAAPTAGLHFTPALEAALKSRGVELHRLTLHVGAGTFLPVKTEETSEHKMHAE 240 FAA EGAVAAPTAGLHFTPALE L++RGV L R+TLHVGAGTFLPVK E+T H+MHAE Sbjct: 181 FAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTEGHRMHAE 240 Query: 241 WGCITAETASALNAARARGGRIVAIGTTSLRLLESAASADGTIEPFAAETSIFITPGYRF 300 WG +T ETA+ALN A+A GGRIVA+GTTS+RLLESAA DGTI PF AETSIFITPGYRF Sbjct: 241 WGSLTPETAAALNQAKAEGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIFITPGYRF 300 Query: 301 RAVDILLTNFHLPRSTLFMLVSAFSGLETMQRAYTHAIKDGYRFYSYGDACLLFR 355 RAVDIL+TNFHLPRSTLFMLVSAF+GLETMQ AY HAI+ GYRFYSYGDACLLFR Sbjct: 301 RAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIESGYRFYSYGDACLLFR 355