BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0106.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01047475.1| peptidyl-prolyl cis-trans isomerase, cyclophi...   303   5e-81
ref|YP_001240315.1| peptidyl prolyl cis-trans isomerase [Bradyrh...   303   7e-81
ref|YP_001205972.1| peptidyl prolyl cis-trans isomerase [Bradyrh...   301   2e-80
ref|YP_318410.1| peptidyl-prolyl cis-trans isomerase, cyclophili...   300   4e-80
ref|YP_002289207.1| peptidyl-prolyl cis-trans isomerase, cycloph...   291   3e-77

>ref|ZP_01047475.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
           sp. Nb-311A]
 gb|EAQ34580.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
           sp. Nb-311A]
          Length = 154

 Score =  303 bits (776), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 144/154 (93%), Positives = 149/154 (96%)

Query: 1   MAATENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60
           MA  ENTLILETTQGPVTIEMRPDLAP HVARIKELVREGFYDGIVFHRVIDGFMAQTGC
Sbjct: 1   MADNENTLILETTQGPVTIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60

Query: 61  PQGTGMGGSGKKLKAEFNKEPHVRGTASMARAANPDSGDSQFFICFDDASFLNGQYTVWG 120
           PQGTGMGGSG+KLKAEFN+EPHVRGTASMARA +PDSGDSQFFICFDDASFLNGQYTVWG
Sbjct: 61  PQGTGMGGSGQKLKAEFNREPHVRGTASMARAQSPDSGDSQFFICFDDASFLNGQYTVWG 120

Query: 121 KVTEGMENVDKIKRGEPVKDPDKIVKARMAADAA 154
           KV EGMENVDKIKRGEPV++PDKIVKARMAADAA
Sbjct: 121 KVVEGMENVDKIKRGEPVQNPDKIVKARMAADAA 154


>ref|YP_001240315.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. BTAi1]
 gb|ABQ36409.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
           sp. BTAi1]
          Length = 154

 Score =  303 bits (775), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 145/154 (94%), Positives = 149/154 (96%)

Query: 1   MAATENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60
           MA TENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC
Sbjct: 1   MAVTENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60

Query: 61  PQGTGMGGSGKKLKAEFNKEPHVRGTASMARAANPDSGDSQFFICFDDASFLNGQYTVWG 120
           PQGTGMGGSGKKLKAEFN EPHVRGTASMARAANPDSGDSQFFICFDDA FL+ QYTVWG
Sbjct: 61  PQGTGMGGSGKKLKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQYTVWG 120

Query: 121 KVTEGMENVDKIKRGEPVKDPDKIVKARMAADAA 154
           KVTEGM+NVDKIKRGEPV++PDKIVKA MAADAA
Sbjct: 121 KVTEGMDNVDKIKRGEPVQNPDKIVKAYMAADAA 154


>ref|YP_001205972.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. ORS 278]
 emb|CAL77747.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
           sp. ORS 278]
          Length = 154

 Score =  301 bits (771), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/154 (93%), Positives = 148/154 (96%)

Query: 1   MAATENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60
           MA TENTLILETTQGPVTIEMRPDLAP HVARIKELVREGFYDGIVFHRVIDGFMAQTGC
Sbjct: 1   MAVTENTLILETTQGPVTIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60

Query: 61  PQGTGMGGSGKKLKAEFNKEPHVRGTASMARAANPDSGDSQFFICFDDASFLNGQYTVWG 120
           PQGTGMGGSGKKLKAEFN EPHVRGTASMARAANPDSGDSQFFICFDDA FL+ QYTVWG
Sbjct: 61  PQGTGMGGSGKKLKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQYTVWG 120

Query: 121 KVTEGMENVDKIKRGEPVKDPDKIVKARMAADAA 154
           KVTEGM+NVDKIKRGEPV++PDKIVKA MAADAA
Sbjct: 121 KVTEGMDNVDKIKRGEPVQNPDKIVKAYMAADAA 154


>ref|YP_318410.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
           winogradskyi Nb-255]
 gb|ABA05058.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
           winogradskyi Nb-255]
          Length = 154

 Score =  300 bits (769), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 142/154 (92%), Positives = 151/154 (98%)

Query: 1   MAATENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60
           MA +ENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC
Sbjct: 1   MADSENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60

Query: 61  PQGTGMGGSGKKLKAEFNKEPHVRGTASMARAANPDSGDSQFFICFDDASFLNGQYTVWG 120
           PQGTGMGGSG+KLKAEFN+EPHVRGTASMARA +PDSGDSQFFICFD+ASFL+GQYTVWG
Sbjct: 61  PQGTGMGGSGQKLKAEFNREPHVRGTASMARAQSPDSGDSQFFICFDNASFLDGQYTVWG 120

Query: 121 KVTEGMENVDKIKRGEPVKDPDKIVKARMAADAA 154
           KV EGMENVDKIKRGEPV++PDKIVKAR+AADAA
Sbjct: 121 KVIEGMENVDKIKRGEPVQNPDKIVKARIAADAA 154


>ref|YP_002289207.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oligotropha
           carboxidovorans OM5]
 ref|YP_004632756.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
           carboxidovorans OM5]
 gb|ACI93342.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oligotropha
           carboxidovorans OM5]
 gb|AEI02939.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
           carboxidovorans OM4]
 gb|AEI06515.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
           carboxidovorans OM5]
          Length = 154

 Score =  291 bits (744), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 139/154 (90%), Positives = 144/154 (93%)

Query: 1   MAATENTLILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60
           MA  +NTLILETTQG VTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC
Sbjct: 1   MADNDNTLILETTQGEVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGC 60

Query: 61  PQGTGMGGSGKKLKAEFNKEPHVRGTASMARAANPDSGDSQFFICFDDASFLNGQYTVWG 120
           P GTG GGSG+KLKAEFN EPHVRGT SMARAANPDSGDSQFFICFDDA FL+ QYTVWG
Sbjct: 61  PHGTGTGGSGQKLKAEFNAEPHVRGTVSMARAANPDSGDSQFFICFDDARFLDKQYTVWG 120

Query: 121 KVTEGMENVDKIKRGEPVKDPDKIVKARMAADAA 154
           KVT GMENVDKIKRGEPV++PDKIVKARMAADAA
Sbjct: 121 KVTSGMENVDKIKRGEPVQNPDKIVKARMAADAA 154