BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0104.p (187 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_532458.1| cyclophilin type peptidyl-prolyl cis-trans isom... 344 3e-93 ref|YP_001205973.1| peptidyl-prolyl cis-trans isomerase A [Brady... 329 1e-88 ref|YP_569729.1| cyclophilin type peptidyl-prolyl cis-trans isom... 329 2e-88 ref|YP_001240316.1| peptidyl-prolyl cis-trans isomerase A [Brady... 327 4e-88 ref|YP_486486.1| peptidyl-prolyl cis-trans isomerase, cyclophili... 327 7e-88 >ref|YP_532458.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gb|ABD88139.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodopseudomonas palustris BisB18] Length = 187 Score = 344 bits (883), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 166/187 (88%), Positives = 175/187 (93%) Query: 1 MIRILAFVAALLCAVPVVAQSLPANLDKADAIVIDTTKGRIVIKLRTDIAPKHAERIKQL 60 MIRIL +AALLCA P +AQ LPANLDKA+AIVID+TKGRIVIKLRTD+AP+HAERIKQL Sbjct: 1 MIRILGLIAALLCAAPAIAQPLPANLDKANAIVIDSTKGRIVIKLRTDLAPQHAERIKQL 60 Query: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD 120 REGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD Sbjct: 61 TREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD 120 Query: 121 SVDSANSQFFIMFADGPSLNGQYTVIGEVVQGMDVVDKLKKASAGSPGGAVTDPDKMVKV 180 SVD+AN+QFFIMFADG LNGQYTVIGEVV GMDVVDKLKKA AGS GAV+DPDKMVKV Sbjct: 121 SVDTANAQFFIMFADGSGLNGQYTVIGEVVTGMDVVDKLKKAPAGSASGAVSDPDKMVKV 180 Query: 181 QVASDIK 187 QVASDIK Sbjct: 181 QVASDIK 187 >ref|YP_001205973.1| peptidyl-prolyl cis-trans isomerase A [Bradyrhizobium sp. ORS 278] emb|CAL77748.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Bradyrhizobium sp. ORS 278] Length = 187 Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 162/187 (86%), Positives = 169/187 (90%) Query: 1 MIRILAFVAALLCAVPVVAQSLPANLDKADAIVIDTTKGRIVIKLRTDIAPKHAERIKQL 60 MIR LAFV AL+ AVP +AQSLPA LDK +A+VIDTTKGRIVIKLRTD+AP+HAER+K L Sbjct: 1 MIRALAFVFALVFAVPALAQSLPAGLDKQNALVIDTTKGRIVIKLRTDLAPQHAERLKTL 60 Query: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD 120 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQ PFKRG VGMARRGD Sbjct: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQTPFKRGTVGMARRGD 120 Query: 121 SVDSANSQFFIMFADGPSLNGQYTVIGEVVQGMDVVDKLKKASAGSPGGAVTDPDKMVKV 180 SVDSANSQFFI F D LNGQYTVIGEVVQGMDVVDKLKKA GS GGAVTDPDKMVKV Sbjct: 121 SVDSANSQFFICFGDASFLNGQYTVIGEVVQGMDVVDKLKKAPPGSAGGAVTDPDKMVKV 180 Query: 181 QVASDIK 187 QVASD K Sbjct: 181 QVASDTK 187 >ref|YP_569729.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB5] gb|ABE39828.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodopseudomonas palustris BisB5] Length = 187 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/187 (84%), Positives = 176/187 (94%) Query: 1 MIRILAFVAALLCAVPVVAQSLPANLDKADAIVIDTTKGRIVIKLRTDIAPKHAERIKQL 60 MIR++ +AAL+ A+P +AQ LPA+LDK +AIVID+TKGRIVI+LR DIAP+HAERIKQL Sbjct: 1 MIRLMGIIAALVFALPALAQPLPASLDKQNAIVIDSTKGRIVIQLRPDIAPQHAERIKQL 60 Query: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD 120 AR+GFY+NVPFHRVM GFMAQTGDGQNFNGTGGSKYPNLKQEFS+VPFKRGIVGMARRGD Sbjct: 61 ARDGFYDNVPFHRVMAGFMAQTGDGQNFNGTGGSKYPNLKQEFSKVPFKRGIVGMARRGD 120 Query: 121 SVDSANSQFFIMFADGPSLNGQYTVIGEVVQGMDVVDKLKKASAGSPGGAVTDPDKMVKV 180 SVD+AN+QFFIMF DGPSLNGQYTVIGEVV GMDVVDKLKKASAGSPGG+VTDPDKMVKV Sbjct: 121 SVDTANAQFFIMFDDGPSLNGQYTVIGEVVSGMDVVDKLKKASAGSPGGSVTDPDKMVKV 180 Query: 181 QVASDIK 187 QVA+D K Sbjct: 181 QVAADAK 187 >ref|YP_001240316.1| peptidyl-prolyl cis-trans isomerase A [Bradyrhizobium sp. BTAi1] gb|ABQ36410.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Bradyrhizobium sp. BTAi1] Length = 187 Score = 327 bits (839), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 160/187 (85%), Positives = 169/187 (90%) Query: 1 MIRILAFVAALLCAVPVVAQSLPANLDKADAIVIDTTKGRIVIKLRTDIAPKHAERIKQL 60 MIR LAFV AL+ A+P +AQSLPA LDK +A+VIDTTKGRI+IKLRTD+AP+HAER+K L Sbjct: 1 MIRALAFVVALVFALPALAQSLPAGLDKQNALVIDTTKGRIIIKLRTDLAPQHAERLKTL 60 Query: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD 120 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQ PFKRG VGMARRGD Sbjct: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQTPFKRGTVGMARRGD 120 Query: 121 SVDSANSQFFIMFADGPSLNGQYTVIGEVVQGMDVVDKLKKASAGSPGGAVTDPDKMVKV 180 S DSANSQFFI F D LNGQYTVIGEVVQGMDVVDKLKKA GS GGAVTDPDKMVKV Sbjct: 121 SNDSANSQFFICFGDASFLNGQYTVIGEVVQGMDVVDKLKKAPPGSAGGAVTDPDKMVKV 180 Query: 181 QVASDIK 187 QVASDIK Sbjct: 181 QVASDIK 187 >ref|YP_486486.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodopseudomonas palustris HaA2] gb|ABD07575.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodopseudomonas palustris HaA2] Length = 187 Score = 327 bits (837), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 157/187 (83%), Positives = 174/187 (93%) Query: 1 MIRILAFVAALLCAVPVVAQSLPANLDKADAIVIDTTKGRIVIKLRTDIAPKHAERIKQL 60 MIR++ +AAL+ A+P +AQ LPA LDK +AIVID+TKGRIVI+LR DIAP+HAERIKQL Sbjct: 1 MIRLIGIIAALVFALPALAQPLPAGLDKQNAIVIDSTKGRIVIQLRPDIAPQHAERIKQL 60 Query: 61 AREGFYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYPNLKQEFSQVPFKRGIVGMARRGD 120 AR+GFYNNVPFHRVM GFMAQTGDG+ FNGTGGSKYPNLKQEFS+VPFKRGIVGMARRGD Sbjct: 61 ARDGFYNNVPFHRVMAGFMAQTGDGEKFNGTGGSKYPNLKQEFSKVPFKRGIVGMARRGD 120 Query: 121 SVDSANSQFFIMFADGPSLNGQYTVIGEVVQGMDVVDKLKKASAGSPGGAVTDPDKMVKV 180 SVDSAN+QFFIMF DGPSLNGQYTVIGEVV GMDVVDKLKKAS GSPGG+VTDPDKMVKV Sbjct: 121 SVDSANAQFFIMFDDGPSLNGQYTVIGEVVSGMDVVDKLKKASPGSPGGSVTDPDKMVKV 180 Query: 181 QVASDIK 187 QVA+D+K Sbjct: 181 QVAADVK 187