BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0100.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241006.1| hypothetical protein BBta_5102 [Bradyrhizobi... 175 5e-42 ref|YP_003378141.1| aminoglycoside phosphotransferase [Kribbella... 146 2e-33 ref|YP_003836398.1| aminoglycoside phosphotransferase [Micromono... 69 3e-10 ref|YP_004084723.1| aminoglycoside phosphotransferase [Micromono... 68 1e-09 ref|YP_003338984.1| aminoglycoside phosphotransferase [Streptosp... 63 2e-08 >ref|YP_001241006.1| hypothetical protein BBta_5102 [Bradyrhizobium sp. BTAi1] gb|ABQ37100.1| hypothetical protein BBta_5102 [Bradyrhizobium sp. BTAi1] Length = 319 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 123/202 (60%), Gaps = 4/202 (1%) Query: 6 LGNREAALTDQELFSIYAAMGAALRHINGITLDSFGYIGPHGVWTSHPTNRAYMSAQFER 65 LG E L S + +G R + I +++FGYIGP GVWT+H NR Y++ QF+R Sbjct: 115 LGPLEQQLPPPLRQSAFRQVGRLSRAFHDIAMEAFGYIGPDGVWTAHADNRTYLTVQFDR 174 Query: 66 KLTEFCTRGGDEALAARLRAGILARSVLLDAADSPRLCHYDFHAGNVLVTPEGQP-RLTG 124 KLTEF +RGG LA R+ + A S L +A +P LCH D H GN+L + LTG Sbjct: 175 KLTEFSSRGGAPDLALRIARHVEACSGLFEACAAPVLCHNDLHPGNILARADDDTVTLTG 234 Query: 125 IVDFENATAGDPLMDVAKALYYFTPKDAPKRDGLLAGYGASDRSDWEATIALYRLASTLE 184 +VDFE A AGDPL DVAKALYY + A +R+ L GYG R++ AT+ +YRL +LE Sbjct: 235 VVDFEGALAGDPLKDVAKALYYLS---AGQREAFLEGYGPMTRTEVGATLDIYRLLFSLE 291 Query: 185 LWCWFAQIGKMDALPKITEELE 206 LWCW+AQ D L + ++E Sbjct: 292 LWCWYAQFDATDKLAPLIADME 313 >ref|YP_003378141.1| aminoglycoside phosphotransferase [Kribbella flavida DSM 17836] gb|ADB29342.1| aminoglycoside phosphotransferase [Kribbella flavida DSM 17836] Length = 309 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/185 (45%), Positives = 104/185 (56%), Gaps = 3/185 (1%) Query: 21 IYAAMGAALRHINGITLDSFGYIGPHGVWTSHPTNRAYMSAQFERKLTEFCTRGGDEALA 80 +Y +G L I+ I ++GY+ V P+N AYM QF +KL EF GGD AL Sbjct: 111 VYKQLGELLTAIHRIPQPAYGYLTDE-VLEPLPSNDAYMRRQFAKKLQEFEELGGDRALH 169 Query: 81 ARLRAGILARSVLLDAADSPRLCHYDFHAGNVLVTPEGQPRLTGIVDFENATAGDPLMDV 140 ARL + S L ++ P LCH DFH GNVLV P+ ++ GIVD ENA A DPL+D+ Sbjct: 170 ARLTEYVEQHSGLFASSSRPVLCHNDFHEGNVLVDPDTW-QVQGIVDVENAIAADPLIDL 228 Query: 141 AKALYYFTPKDAPKRDGLLAGYGASDRSDWEATIALYRLASTLELWCWFAQIGKMDALPK 200 AK YY D K GLL GYG SDW A+YRL LELW WF IG +D L Sbjct: 229 AKTQYYSIKNDQAKLSGLLTGYGELP-SDWVERTAVYRLYHALELWDWFRLIGVIDPLES 287 Query: 201 ITEEL 205 I +L Sbjct: 288 IAADL 292 >ref|YP_003836398.1| aminoglycoside phosphotransferase [Micromonospora aurantiaca ATCC 27029] gb|ADL46822.1| aminoglycoside phosphotransferase [Micromonospora aurantiaca ATCC 27029] Length = 333 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 7/152 (4%) Query: 17 ELFSIYAAMGAALRHINGITLDSFGYIGPHGVWTSHPTNRAYMSAQFERKLTEFCTRGGD 76 ++ + A G AL ++G+T + +GY G S T R +A + L + Sbjct: 128 DVGPLRAEFGRALAALHGVTGERYGYDGDR---ASGATWRDAYTAMVDDMLADAADWAVP 184 Query: 77 -EALAARLRAGILARSVLLDAADSPRLCHYDFHAGNVLVT--PEGQPRLTGIVDFENATA 133 A AAR+R + + +LDA P L H+D AGNVL P+G PRLTG+VD E Sbjct: 185 LPAPAARIRELVARHAEVLDAVRRPALLHFDGWAGNVLAVDGPDGTPRLTGLVDGERYLW 244 Query: 134 GDPLMDVAKALYYFTPKDAPKRDGLLAGYGAS 165 GDPLMD+ L + +D P D L+ Y A+ Sbjct: 245 GDPLMDLVSPLLFRRAEDEPD-DPLVRAYRAA 275 >ref|YP_004084723.1| aminoglycoside phosphotransferase [Micromonospora sp. L5] gb|ADU10572.1| aminoglycoside phosphotransferase [Micromonospora sp. L5] Length = 333 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 7/152 (4%) Query: 17 ELFSIYAAMGAALRHINGITLDSFGYIGPHGVWTSHPTNRAYMSAQFERKLTEFCTRGGD 76 ++ + A G AL ++G+T + +GY G S T R +A + L + Sbjct: 128 DVGPLRAEFGRALAALHGVTGERYGYDGDR---ASGATWRDAYTAMVDDMLADAADWAVP 184 Query: 77 -EALAARLRAGILARSVLLDAADSPRLCHYDFHAGNVLVT--PEGQPRLTGIVDFENATA 133 A A R+R + + +LDA P L H+D AGNVL P+G PRLTG+VD E Sbjct: 185 LPAPATRIRELVARHAEVLDAVRRPALLHFDGWAGNVLAVDGPDGTPRLTGLVDGERYLW 244 Query: 134 GDPLMDVAKALYYFTPKDAPKRDGLLAGYGAS 165 GDPLMD+ L + +D P D L+ Y A+ Sbjct: 245 GDPLMDLVSPLLFRRAEDEPD-DPLVRAYRAA 275 >ref|YP_003338984.1| aminoglycoside phosphotransferase [Streptosporangium roseum DSM 43021] gb|ACZ86241.1| aminoglycoside phosphotransferase [Streptosporangium roseum DSM 43021] Length = 331 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 22/166 (13%) Query: 25 MGAALRHINGITLDSFGYIGPHGVWTSHPTNRAYMS------AQFERKLTEFCTRGGDEA 78 +G L +N IT D +GY PH T A+++ A R T Sbjct: 133 LGGHLARLNSITGDVYGY--PHAGLTGGTWRAAFLAMTGAILADARRYATPLPRP----- 185 Query: 79 LAARLRAGILARSVLLDAADSPRLCHYDFHAGNVLVTPEGQPRLTGIVDFENATAGDPLM 138 AA + A I A + +L+ +P L H+D GNV +TP PR+ I+D E A GDPL Sbjct: 186 -AAEISAVIEASAGVLEEVKAPSLVHFDLWPGNVFLTPGDSPRIQAIIDHERAFWGDPLA 244 Query: 139 DVAKALYYFTPKDAPKRDGLLAGY----GASDRSDW-EATIALYRL 179 D + + + D ++AGY G + +D A IALYRL Sbjct: 245 DFVTPTIF---GELDESDEIVAGYREAGGVVEFTDSARARIALYRL 287