BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0086.p (179 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771347.1| hypothetical protein bll4707 [Bradyrhizobium ja... 276 8e-73 ref|YP_001240331.1| hypothetical protein BBta_4385 [Bradyrhizobi... 263 6e-69 ref|YP_001205990.1| putative signal peptide [Bradyrhizobium sp. ... 258 3e-67 ref|YP_001771780.1| putative signal peptide [Methylobacterium sp... 240 7e-62 ref|YP_001414946.1| hypothetical protein Xaut_0030 [Xanthobacter... 229 2e-58 >ref|NP_771347.1| hypothetical protein bll4707 [Bradyrhizobium japonicum USDA 110] dbj|BAC49972.1| bll4707 [Bradyrhizobium japonicum USDA 110] Length = 188 Score = 276 bits (707), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 139/169 (82%), Positives = 148/169 (87%), Gaps = 1/169 (0%) Query: 12 VAALAVLGAAWAHGPTRQKVRESIEIDAPQAKVWAVIGNFQDMSWLAGVTKTEGEKGNEI 71 +A A WAHGPTRQKVRESIEI+A AKVWAVIGNFQDMSWL VTKTEGEKGNEI Sbjct: 20 MALTAAFEPVWAHGPTRQKVRESIEINAAPAKVWAVIGNFQDMSWLPPVTKTEGEKGNEI 79 Query: 72 GATRRLTLGPGATVDEELYKYEPEMMSYSYRITAVDVKVLPVTNYSSTLTVSPAPDGK-S 130 GATRRLTL GATVDEELYK++ M+YSYRITAVDVKVLPVTNYSSTLTV+P+ DGK + Sbjct: 80 GATRRLTLTGGATVDEELYKFDAAAMTYSYRITAVDVKVLPVTNYSSTLTVTPSADGKGA 139 Query: 131 KLEWAGAFYRGFPNNDPPPELSDEAAVKAVSGLYKAGLEALKKKIESGT 179 LEWAGAFYRGFPNNDPPPELSDEAA AVSGLYKAGLEALKKKIESG+ Sbjct: 140 TLEWAGAFYRGFPNNDPPPELSDEAAKTAVSGLYKAGLEALKKKIESGS 188 >ref|YP_001240331.1| hypothetical protein BBta_4385 [Bradyrhizobium sp. BTAi1] gb|ABQ36425.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 187 Score = 263 bits (673), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 133/185 (71%), Positives = 151/185 (81%), Gaps = 10/185 (5%) Query: 5 IARACVVVAALAV---------LGAAWAHGPTRQKVRESIEIDAPQAKVWAVIGNFQDMS 55 +A V AALA+ L A AHGPTR+KV+E +EI+A AKVWAVIGNFQDMS Sbjct: 3 FGKALAVTAALAIATTGLTITPLTTADAHGPTRRKVQEHVEINAAPAKVWAVIGNFQDMS 62 Query: 56 WLAGVTKTEGEKGNEIGATRRLTLGPGATVDEELYKYEPEMMSYSYRITAVDVKVLPVTN 115 WL V KTEG+KGNEIGATR+LTL GATVDEELYK++ E MSYSYRITAVDVKVLPVTN Sbjct: 63 WLGVVEKTEGDKGNEIGATRKLTLKGGATVDEELYKFDAEKMSYSYRITAVDVKVLPVTN 122 Query: 116 YSSTLTVSPAPDGK-SKLEWAGAFYRGFPNNDPPPELSDEAAVKAVSGLYKAGLEALKKK 174 YSST++V+P+ DGK S +EW GAFYRGFPNNDPPPELSDEAAV AV+GLYK GLE LKKK Sbjct: 123 YSSTISVAPSADGKGSVVEWTGAFYRGFPNNDPPPELSDEAAVNAVTGLYKGGLEGLKKK 182 Query: 175 IESGT 179 +ESG+ Sbjct: 183 VESGS 187 >ref|YP_001205990.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL77765.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 189 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 131/189 (69%), Positives = 150/189 (79%), Gaps = 10/189 (5%) Query: 1 MRRTIARACVVVAALAVLGAAW---------AHGPTRQKVRESIEIDAPQAKVWAVIGNF 51 MR ++ VAALA++ A AHGPTR+KV+E +EI+A AKVWAV+GNF Sbjct: 1 MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNF 60 Query: 52 QDMSWLAGVTKTEGEKGNEIGATRRLTLGPGATVDEELYKYEPEMMSYSYRITAVDVKVL 111 QDMSWL V KT G+KGNEIGATR+LTL GATVDEELYKY+ E MSYSYRITAVDVKVL Sbjct: 61 QDMSWLGVVDKTAGDKGNEIGATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVL 120 Query: 112 PVTNYSSTLTVSPAPDGK-SKLEWAGAFYRGFPNNDPPPELSDEAAVKAVSGLYKAGLEA 170 PVTNYSST+ V+P+ DGK S +EW GAFYRGFPNNDPPPELSDEAAV AV+GLYK GLE Sbjct: 121 PVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPELSDEAAVNAVTGLYKGGLEG 180 Query: 171 LKKKIESGT 179 LK K+ESG+ Sbjct: 181 LKTKVESGS 189 >ref|YP_001771780.1| putative signal peptide [Methylobacterium sp. 4-46] gb|ACA19346.1| conserved hypothetical protein; putative signal peptide [Methylobacterium sp. 4-46] Length = 179 Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 123/176 (69%), Positives = 135/176 (76%), Gaps = 1/176 (0%) Query: 1 MRRTIARACVVVAALAVLGAAWAHGPTRQKVRESIEIDAPQAKVWAVIGNFQDMSWLAGV 60 M+ I A + AL+ L AA AHGPTR+KV E I IDAP AKVWAV+GNFQDMSWL V Sbjct: 1 MKLLIGSAVAALVALSPL-AAEAHGPTRKKVEEKITIDAPPAKVWAVVGNFQDMSWLPPV 59 Query: 61 TKTEGEKGNEIGATRRLTLGPGATVDEELYKYEPEMMSYSYRITAVDVKVLPVTNYSSTL 120 KTEG+ GNE+ ATR LTL GATV+EELYKY E MS SYRI VDVKVLPV NYSST+ Sbjct: 60 EKTEGKGGNEVKATRTLTLKGGATVEEELYKYNAEQMSLSYRINKVDVKVLPVNNYSSTI 119 Query: 121 TVSPAPDGKSKLEWAGAFYRGFPNNDPPPELSDEAAVKAVSGLYKAGLEALKKKIE 176 V PA GKS + W GAFYRGF NNDPPPELSDEAAVKAVS LYKAGL+ LK K+E Sbjct: 120 KVEPAEGGKSSVSWDGAFYRGFMNNDPPPELSDEAAVKAVSDLYKAGLQGLKAKVE 175 >ref|YP_001414946.1| hypothetical protein Xaut_0030 [Xanthobacter autotrophicus Py2] gb|ABS65289.1| putative exported protein of unknown function [Xanthobacter autotrophicus Py2] Length = 178 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/160 (68%), Positives = 128/160 (80%) Query: 20 AAWAHGPTRQKVRESIEIDAPQAKVWAVIGNFQDMSWLAGVTKTEGEKGNEIGATRRLTL 79 AA AHGPTR+KV E++EI+AP KVWA IGNFQDMSW VT G+ GN I ATR+LTL Sbjct: 19 AADAHGPTRKKVTETVEINAPAEKVWAAIGNFQDMSWHPAVTANTGQGGNAIDATRKLTL 78 Query: 80 GPGATVDEELYKYEPEMMSYSYRITAVDVKVLPVTNYSSTLTVSPAPDGKSKLEWAGAFY 139 G T+DE LYK+EPE SYSYRI VDVKVLPVTNYSST+TV+P SK+EW GAFY Sbjct: 79 QGGGTIDEVLYKFEPEQKSYSYRIAEVDVKVLPVTNYSSTITVTPIDATHSKVEWRGAFY 138 Query: 140 RGFPNNDPPPELSDEAAVKAVSGLYKAGLEALKKKIESGT 179 RG+PNNDPPPELSDEAA+ AV+G+Y+ GL+ALK K+E G+ Sbjct: 139 RGYPNNDPPPELSDEAAIAAVTGVYRGGLDALKAKLEKGS 178