BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0083.p         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001239733.1| hypothetical protein BBta_3749 [Bradyrhizobi...    93   2e-17
ref|ZP_05971519.2| conserved hypothetical protein [Providencia r...    87   6e-16
ref|YP_001477771.1| hypothetical protein Spro_1539 [Serratia pro...    84   7e-15
ref|YP_675554.1| hypothetical protein Meso_3017 [Mesorhizobium s...    77   8e-13
ref|YP_003396301.1| hypothetical protein Cwoe_4513 [Conexibacter...    73   1e-11

>ref|YP_001239733.1| hypothetical protein BBta_3749 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35827.1| hypothetical protein BBta_3749 [Bradyrhizobium sp. BTAi1]
          Length = 112

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 4/95 (4%)

Query: 5  KAILTEQQVVCIYDGRPRELCPHIIGHSKSGEEVVLAWQFAGESSGKLP---QWRCLRLA 61
          +A+ T QQV+C+  G  R LCP I+GHS  G E VL +QFAG +S  LP   QW+C  ++
Sbjct: 2  QAMRTRQQVLCMDRGFARALCPIILGHS-GGRERVLGFQFAGGASRGLPPGGQWKCFDIS 60

Query: 62 NVSDISLRKGRWHEGGSHRTEQRCVSAIDLDINID 96
           +S++ LR+GRWH G SH   Q CV+ ++LD+N D
Sbjct: 61 GMSEVELREGRWHSGRSHSQPQYCVADVELDVNPD 95


>ref|ZP_05971519.2| conserved hypothetical protein [Providencia rustigianii DSM 4541]
 gb|EFB73795.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
          Length = 106

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 7/100 (7%)

Query: 2   LFRKAILTEQQVVCIYDGRPRELCPHIIGHSKSGEEVVLAWQFAGESS------GKLPQW 55
           L  +AI  ++Q++ +Y G  RE+CPH++G SK+G E  L +QF G SS      G    W
Sbjct: 8   LIAEAIKNKKQIIAMYKGHLREMCPHVLG-SKNGREQALFYQFGGYSSSGVIIPGSSSNW 66

Query: 56  RCLRLANVSDISLRKGRWHEGGSHRTEQRCVSAIDLDINI 95
           RC+++  +S+++LR G WH   +H   Q CV  ID+++N 
Sbjct: 67  RCIQIDGLSEVTLRDGEWHTAANHSQTQTCVDRIDIEVNF 106


>ref|YP_001477771.1| hypothetical protein Spro_1539 [Serratia proteamaculans 568]
 gb|ABV40643.1| conserved hypothetical protein [Serratia proteamaculans 568]
          Length = 104

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 7/100 (7%)

Query: 2   LFRKAILTEQQVVCIYDGRPRELCPHIIGHSKSGEEVVLAWQFAGESS------GKLPQW 55
           + + AI  ++Q++  Y G  RELCPH IG +K+G E  L +QF G SS      G    W
Sbjct: 6   IIKDAIKNKKQIIATYQGHIRELCPHAIG-TKNGREQALFYQFGGHSSSGTIVPGSPSNW 64

Query: 56  RCLRLANVSDISLRKGRWHEGGSHRTEQRCVSAIDLDINI 95
           RCL +  +S IS+R G WH  G+H   Q C+  ID+++++
Sbjct: 65  RCLPIDGLSSISVRDGTWHTAGNHSRTQSCIDWIDIEVSL 104


>ref|YP_675554.1| hypothetical protein Meso_3017 [Mesorhizobium sp. BNC1]
 gb|ABG64389.1| hypothetical protein Meso_3017 [Chelativorans sp. BNC1]
          Length = 101

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 5  KAILTEQQVVCIYDGRPRELCPHIIGHSKSGEEVVLAWQFAGESSGKLP---QWRCLRLA 61
          +A+  ++QV C Y G  RELC H++G  K+G E  LA QFAGESS  L     WRCL L 
Sbjct: 9  QAVEQKKQVTCTYQGYHRELCVHVVGW-KNGREQALALQFAGESSSGLQPGGSWRCLVLD 67

Query: 62 NVSDISLRKGRWHEGGSHRTEQRCV 86
           VS++SLR G WH    H   Q CV
Sbjct: 68 EVSNVSLRDGPWHTRNDHSQPQTCV 92


>ref|YP_003396301.1| hypothetical protein Cwoe_4513 [Conexibacter woesei DSM 14684]
 gb|ADB52926.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
          Length = 112

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 2   LFRKAILTEQQVVCIYDGRPRELCPHIIGHSKSGEEVVLAWQFAGESS-GKLP--QWRCL 58
           + R AI+  QQ+V  Y G  RELCPH IG +K G    L +QF G S  G  P   WRCL
Sbjct: 7   IVRAAIVNRQQLVATYGGHVRELCPHAIG-TKRGRAQALFFQFGGSSGRGLAPGGDWRCL 65

Query: 59  RLANVSDISLRKGRWHEGGSHRTEQRCVSAIDLDI 93
            L+ +S ++ R G WH G      Q C+  ++L +
Sbjct: 66  PLSGLSGVAPRDGDWHTGPGAAQRQTCLDVVELAV 100