BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0081.p (502 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771351.1| acyl-CoA synthetase [Bradyrhizobium japonicum U... 808 0.0 ref|YP_001205994.1| acyl-CoA synthetase [Bradyrhizobium sp. ORS ... 781 0.0 ref|YP_001240335.1| acyl-CoA synthetase [Bradyrhizobium sp. BTAi... 780 0.0 ref|YP_001417703.1| acyl-CoA synthetase [Xanthobacter autotrophi... 662 0.0 ref|YP_001527452.1| acyl-CoA synthetase [Azorhizobium caulinodan... 662 0.0 >ref|NP_771351.1| acyl-CoA synthetase [Bradyrhizobium japonicum USDA 110] dbj|BAC49976.1| fatty acid CoA ligase [Bradyrhizobium japonicum USDA 110] Length = 560 Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/531 (75%), Positives = 439/531 (82%), Gaps = 44/531 (8%) Query: 15 RVSRRVMNLAYILTQNARRHGDRPGFIWNEKAWSWRHIDQNVSALAAALAARGIVKGDRI 74 R+SRRVMNLA++LTQNARRHG RPGF+W +++W+WR ID VSALAAALAARGI KGDRI Sbjct: 30 RMSRRVMNLAHMLTQNARRHGSRPGFVWGDRSWTWREIDAQVSALAAALAARGIAKGDRI 89 Query: 75 LVHSKNCDEMFWSMFAAFRLGAVWVPTNFRLMPDEVAYLAEASGAKAFLCHADFPEHAKA 134 LVHSKN DEMF+SMFAAFRLGAVWVP NFRLMPDEV+YLA+ASGAKAFLCH DFPEHA A Sbjct: 90 LVHSKNGDEMFFSMFAAFRLGAVWVPPNFRLMPDEVSYLAQASGAKAFLCHVDFPEHAAA 149 Query: 135 AANPALEFVWRIGEEGTFGEATVGDVIARHARAVVENVAVDYDDPCWFFFTSGTTGRSKA 194 + AL F W I +G FGEA+V D IA HA VENVAV++DDPCWFFFTSGTTGRSKA Sbjct: 150 VSGGALAFTWSIDGKGAFGEASVADAIASHAGHAVENVAVEHDDPCWFFFTSGTTGRSKA 209 Query: 195 AVLTHGQMAFVITNHLADLM--------------XSHGAGVHQLVQTARGVPTILLPSEK 240 AVLTHGQM FV+TNHLADL SHGAGVHQLVQTARGV T+LLP+EK Sbjct: 210 AVLTHGQMGFVVTNHLADLTPGVTEDDASLVVAPLSHGAGVHQLVQTARGVRTVLLPTEK 269 Query: 241 FDIAEAFRLIAKHRVSNMFTVPTILKMMVEHPAADQHDHSSLRYIIYAGAPMYREDQKAA 300 FDI EAFRLI KHRVSN+FTVPTILKMMVEHPAAD++DHSSLR++IYAGAPMYREDQKAA Sbjct: 270 FDIDEAFRLIEKHRVSNLFTVPTILKMMVEHPAADKYDHSSLRHVIYAGAPMYREDQKAA 329 Query: 301 LHKLGGVLVQYFGLGEVTGNITVLPPGLHDPEDGPRARIGTCGFERTGMQVSIQDDDGSE 360 L KLG V+VQYFGLGEVTGNITVLP LHDPEDGP A+IGTCGFERTGMQVSIQDD+G E Sbjct: 330 LKKLGKVIVQYFGLGEVTGNITVLPAALHDPEDGPHAKIGTCGFERTGMQVSIQDDEGRE 389 Query: 361 LKAHETGEICVIGPGVFAGYYDNPEANAKAFRDGWFRTGDLGHMDEEGFVYITGRASDMY 420 L A+++GEICVIGP V AGYYDNPEANAKAFR+GWFRTGDLGHMDEEGFVYITGRASDMY Sbjct: 390 LGANQSGEICVIGPAVLAGYYDNPEANAKAFRNGWFRTGDLGHMDEEGFVYITGRASDMY 449 Query: 421 ISG------------------------------FWGEVGVAVCVAREGTEAVAEAELAAY 450 ISG WGEVGVAVCVAREG AV EAE+AA+ Sbjct: 450 ISGGSNIYPREIEEKILTHPAVGEVAVLGVPDATWGEVGVAVCVAREGATAVTEAEMAAF 509 Query: 451 LAPKVPRYKMPKRFFFWEALPKSGYGKVPKRLIRDELEARGLLEVIAKSTG 501 L+PKVPRYKMPKRFFFWEALPKSGYGKVPKR++RDELEARGLL++ TG Sbjct: 510 LSPKVPRYKMPKRFFFWEALPKSGYGKVPKRMVRDELEARGLLDLDKTKTG 560 >ref|YP_001205994.1| acyl-CoA synthetase [Bradyrhizobium sp. ORS 278] emb|CAL77769.1| Fatty acid CoA ligase [Bradyrhizobium sp. ORS 278] Length = 531 Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/525 (73%), Positives = 424/525 (80%), Gaps = 46/525 (8%) Query: 15 RVSRRVMNLAYILTQNARRHGDRPGFIWNEKAWSWRHIDQNVSALAAALAARGIVKGDRI 74 R+SRRVMNLA+I+TQN RR GDR GF+W E++WSWR ID VSALAAALA +GI KGDRI Sbjct: 5 RMSRRVMNLAHIVTQNGRRLGDRIGFVWGERSWSWREIDTMVSALAAALAEQGISKGDRI 64 Query: 75 LVHSKNCDEMFWSMFAAFRLGAVWVPTNFRLMPDEVAYLAEASGAKAFLCHADFPEHAKA 134 LVHSKNC+EMF SMFAAFRLGAVWVPTNFRLMPDEVAYLA ASGAKAFLCH DFPEHA Sbjct: 65 LVHSKNCEEMFVSMFAAFRLGAVWVPTNFRLMPDEVAYLATASGAKAFLCHVDFPEHA-- 122 Query: 135 AANPALEFVWRIGEEGTFGEATVGDVIARHARAVVENVAVDYDDPCWFFFTSGTTGRSKA 194 AA + F WRIG+ G+FG +V D I HA A V N V++DDPCWFFFTSGTTGRSKA Sbjct: 123 AAVTSATFTWRIGDGGSFGTRSVSDAIKAHAGADVANATVEHDDPCWFFFTSGTTGRSKA 182 Query: 195 AVLTHGQMAFVITNHLADLM--------------XSHGAGVHQLVQTARGVPTILLPSEK 240 AVLTHGQMAFVITNHLADL SHGAGVHQL+Q+ARG T+LLPSEK Sbjct: 183 AVLTHGQMAFVITNHLADLTPGTTEHDASLVVAPLSHGAGVHQLMQSARGAKTVLLPSEK 242 Query: 241 FDIAEAFRLIAKHRVSNMFTVPTILKMMVEHPAADQHDHSSLRYIIYAGAPMYREDQKAA 300 FDIAEAFRLI +HR+SN+FTVPTILKMMVEHPA DQ DHSSLR++IYAGAPMYREDQK A Sbjct: 243 FDIAEAFRLIERHRISNLFTVPTILKMMVEHPAVDQFDHSSLRHVIYAGAPMYREDQKRA 302 Query: 301 LHKLGGVLVQYFGLGEVTGNITVLPPGLHDPEDGPRARIGTCGFERTGMQVSIQDDDGSE 360 L +LG V+VQYFGLGEVTGNITVLP H+ EDGP ARIG+CG+ERTGMQVSIQDD G E Sbjct: 303 LARLGKVIVQYFGLGEVTGNITVLPAPAHEEEDGPEARIGSCGYERTGMQVSIQDDQGRE 362 Query: 361 LKAHETGEICVIGPGVFAGYYDNPEANAKAFRDGWFRTGDLGHMDEEGFVYITGRASDMY 420 LK ETGEICVIGP VFAGYYDNPEANAKAFRDGWFRTGDLGHMD +GF+YITGRASDMY Sbjct: 363 LKPGETGEICVIGPAVFAGYYDNPEANAKAFRDGWFRTGDLGHMDAQGFLYITGRASDMY 422 Query: 421 ISG------------------------------FWGEVGVAVCVAREGTEAVAEAELAAY 450 ISG WGEVGVAVCVAREG +A +E+++A Y Sbjct: 423 ISGGSNIYPREVEEKILTHPDIGEVAVLGVPDPVWGEVGVAVCVAREGAKAPSESDIAGY 482 Query: 451 LAPKVPRYKMPKRFFFWEALPKSGYGKVPKRLIRDELEARGLLEV 495 LA K+PRYKMPKRFFFWE+LPKSGYGK+PKRL+RDELEARGLL++ Sbjct: 483 LATKLPRYKMPKRFFFWESLPKSGYGKIPKRLVRDELEARGLLDL 527 >ref|YP_001240335.1| acyl-CoA synthetase [Bradyrhizobium sp. BTAi1] gb|ABQ36429.1| Fatty acid CoA ligase [Bradyrhizobium sp. BTAi1] Length = 533 Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/532 (72%), Positives = 424/532 (79%), Gaps = 46/532 (8%) Query: 11 GGIARVSRRVMNLAYILTQNARRHGDRPGFIWNEKAWSWRHIDQNVSALAAALAARGIVK 70 G R+SRRVMNLA+I+TQN RR GDR GF+W +++W+WR +D VSALAAALA +GIVK Sbjct: 3 GAQLRMSRRVMNLAHIVTQNGRRLGDRIGFVWGDRSWTWRELDAMVSALAAALAEQGIVK 62 Query: 71 GDRILVHSKNCDEMFWSMFAAFRLGAVWVPTNFRLMPDEVAYLAEASGAKAFLCHADFPE 130 GDRILVHSKNC+EMF SMFAAFRLGAVWVPTNFRLMPDEVAYLA ASGAKAFLCH DFPE Sbjct: 63 GDRILVHSKNCEEMFVSMFAAFRLGAVWVPTNFRLMPDEVAYLATASGAKAFLCHGDFPE 122 Query: 131 HAKAAANPALEFVWRIGEEGTFGEATVGDVIARHARAVVENVAVDYDDPCWFFFTSGTTG 190 HA AA +F WRIGE G+ G V + I HA A + N AV++DDPCWFFFTSGTTG Sbjct: 123 HA--AAVTTTDFTWRIGEGGSLGTRAVAEAIRAHAGAEIANAAVEHDDPCWFFFTSGTTG 180 Query: 191 RSKAAVLTHGQMAFVITNHLADLM--------------XSHGAGVHQLVQTARGVPTILL 236 RSKAAVLTHGQMAFVITNHLADL SHGAGVHQL+Q+ARG T+LL Sbjct: 181 RSKAAVLTHGQMAFVITNHLADLTPGTTEHDASLVVAPLSHGAGVHQLMQSARGAKTVLL 240 Query: 237 PSEKFDIAEAFRLIAKHRVSNMFTVPTILKMMVEHPAADQHDHSSLRYIIYAGAPMYRED 296 PSEKFDIAEAF LI +HRVSN+FTVPTILKMMVEHPA DQ DHSSLR++IYAGAPMYRED Sbjct: 241 PSEKFDIAEAFSLIERHRVSNLFTVPTILKMMVEHPAIDQFDHSSLRHVIYAGAPMYRED 300 Query: 297 QKAALHKLGGVLVQYFGLGEVTGNITVLPPGLHDPEDGPRARIGTCGFERTGMQVSIQDD 356 QK AL +LG V+VQYFGLGEVTGNITVLP H+ EDGP ARIGTCG+ERTGMQVSIQDD Sbjct: 301 QKRALARLGKVIVQYFGLGEVTGNITVLPAAAHEEEDGPEARIGTCGYERTGMQVSIQDD 360 Query: 357 DGSELKAHETGEICVIGPGVFAGYYDNPEANAKAFRDGWFRTGDLGHMDEEGFVYITGRA 416 G ELK ETGEICVIGP VFAGYYDNPEANAKAFRDGWFRTGDLGHMD +GFVYITGRA Sbjct: 361 QGRELKPSETGEICVIGPAVFAGYYDNPEANAKAFRDGWFRTGDLGHMDAQGFVYITGRA 420 Query: 417 SDMYISG------------------------------FWGEVGVAVCVAREGTEAVAEAE 446 SDMYISG WGEVGVAVCVAREG A +E+E Sbjct: 421 SDMYISGGSNIYPREVEEKILTHPAIGEVAVLGVPDPVWGEVGVAVCVAREGGAAPSESE 480 Query: 447 LAAYLAPKVPRYKMPKRFFFWEALPKSGYGKVPKRLIRDELEARGLLEVIAK 498 +A YLA K+PRYKMPKRFFFW+ALPKSGYGK+PKRL+RDELEARGLL++ + Sbjct: 481 IAGYLATKLPRYKMPKRFFFWDALPKSGYGKIPKRLVRDELEARGLLDLTKQ 532 >ref|YP_001417703.1| acyl-CoA synthetase [Xanthobacter autotrophicus Py2] gb|ABS68046.1| AMP-dependent synthetase and ligase [Xanthobacter autotrophicus Py2] Length = 556 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/535 (63%), Positives = 387/535 (72%), Gaps = 49/535 (9%) Query: 7 AAPRGGIARVSRRVMNLAYILTQNARRHGDRPGFIWNEKAWSWRHIDQNVSALAAALAAR 66 AAPRGG+AR SRRVMNL+++L Q ARR + GF+ + +W ++ V A+AA LA R Sbjct: 18 AAPRGGVARSSRRVMNLSHVLRQAARRFPNEIGFVDGARTVTWGEMEARVDAMAAELAHR 77 Query: 67 GIVKGDRILVHSKNCDEMFWSMFAAFRLGAVWVPTNFRLMPDEVAYLAEASGAKAFLCHA 126 G+ KGDRILV SKNC EMF SMFAAFR+GAVWVPTNFR P EVAYLA ASGA +CHA Sbjct: 78 GVGKGDRILVQSKNCLEMFESMFAAFRIGAVWVPTNFRQTPGEVAYLASASGAALMICHA 137 Query: 127 DFPEHAKA--AANPALEFVWRIGEEGTFGEATVGDVIARHARAVVENVAVDYDDPCWFFF 184 DFPEH A A P + V IG FG D++A + V++DDPCWFFF Sbjct: 138 DFPEHVPAVLAEAPTVTAVIAIGA-ADFG-PDYADLVAARLGEKAKVADVEHDDPCWFFF 195 Query: 185 TSGTTGRSKAAVLTHGQMAFVITNHLADLM--------------XSHGAGVHQLVQTARG 230 TSGTTGR KAAVLTHGQMAFVITNHL DLM SHGAGVHQLVQ AR Sbjct: 196 TSGTTGRPKAAVLTHGQMAFVITNHLCDLMPGTTQADASLVVAPLSHGAGVHQLVQVARA 255 Query: 231 VPTILLPSEKFDIAEAFRLIAKHRVSNMFTVPTILKMMVEHPAADQHDHSSLRYIIYAGA 290 V T+LLPSEKFD AEA+RL+ + RV+NMFTVPTI K++ EHP+ + +DHSSLRY+IYAGA Sbjct: 256 VKTVLLPSEKFDPAEAWRLVEQWRVTNMFTVPTITKLLAEHPSVNTYDHSSLRYVIYAGA 315 Query: 291 PMYREDQKAALHKLGGVLVQYFGLGEVTGNITVLPPGLHDPEDGPRARIGTCGFERTGMQ 350 PMYREDQK AL LG VLVQYFGLGEVTGNITVLPP LHDPEDGP ++GTCGFERTG+Q Sbjct: 316 PMYREDQKRALKALGKVLVQYFGLGEVTGNITVLPPALHDPEDGPSVKLGTCGFERTGIQ 375 Query: 351 VSIQDDDGSELKAHETGEICVIGPGVFAGYYDNPEANAKAFRDGWFRTGDLGHMDEEGFV 410 V IQ+D G E++ ETGEICV GP VFAGYYDNPEANAKAFRDGWFRTGDLGHMD EGFV Sbjct: 376 VQIQNDMGEEVQPFETGEICVCGPAVFAGYYDNPEANAKAFRDGWFRTGDLGHMDSEGFV 435 Query: 411 YITGRASDMYISG------------------------------FWGEVGVAVCVAREGTE 440 YITGRASDMYISG WGEVGVAVCV REG Sbjct: 436 YITGRASDMYISGGSNVYPREVEEKVLTHPAVAEVAILGVPDPMWGEVGVAVCVLREGA- 494 Query: 441 AVAEAELAAYLAPKVPRYKMPKRFFFWEALPKSGYGKVPKRLIRDELEARGLLEV 495 ++AE EL A+L KV RYKMP+R FW+ALPKS YGK+ K+++R+ L RGLLE+ Sbjct: 495 SLAEDELIAFLDGKVARYKMPRRVHFWDALPKSAYGKITKKMVREALAERGLLEM 549 >ref|YP_001527452.1| acyl-CoA synthetase [Azorhizobium caulinodans ORS 571] dbj|BAF90534.1| putative fatty acid CoA ligase [Azorhizobium caulinodans ORS 571] Length = 549 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/534 (62%), Positives = 388/534 (72%), Gaps = 49/534 (9%) Query: 6 AAAPRGGIARVSRRVMNLAYILTQNARRHGDRPGFIWNEKAWSWRHIDQNVSALAAALAA 65 A AP+GG+A ++RVMNL++IL Q ARR GF+ + +W +D V A+A ALA Sbjct: 9 AGAPKGGVAPATKRVMNLSHILRQAARRFPQEIGFVHGPLSVTWAEMDARVDAMAVALAG 68 Query: 66 RGIVKGDRILVHSKNCDEMFWSMFAAFRLGAVWVPTNFRLMPDEVAYLAEASGAKAFLCH 125 +G+ KGDR+LV SKNC +MF SMFA FR+GAVWVPTNFR PDEVAYLA+ASGA A +CH Sbjct: 69 KGLGKGDRVLVQSKNCLQMFESMFACFRIGAVWVPTNFRQTPDEVAYLAQASGAVAMICH 128 Query: 126 ADFPEHAKAAAN--PALEFVWRIGEEGTFGEATVGDVIARHARAVVENVAVDYDDPCWFF 183 ADFP+H + P + V IG+ FGE ++A H V++DDPCWFF Sbjct: 129 ADFPDHERIVREQAPGIATVIGIGD-APFGE-DYDALVAAHLGRKGPVADVEHDDPCWFF 186 Query: 184 FTSGTTGRSKAAVLTHGQMAFVITNHLADLM--------------XSHGAGVHQLVQTAR 229 FTSGTTGR KAAVLTHGQMAFVITNHL DLM SHGAG+HQLVQ AR Sbjct: 187 FTSGTTGRPKAAVLTHGQMAFVITNHLCDLMPGTTQADASLVVAPLSHGAGIHQLVQAAR 246 Query: 230 GVPTILLPSEKFDIAEAFRLIAKHRVSNMFTVPTILKMMVEHPAADQHDHSSLRYIIYAG 289 V TILLPSE+FD+AEA+ L+ K +V+N+FTVPTI KM+VEHP+ DQ DHSSLRY+IYAG Sbjct: 247 AVKTILLPSERFDVAEAWGLVEKWKVTNIFTVPTITKMLVEHPSVDQFDHSSLRYVIYAG 306 Query: 290 APMYREDQKAALHKLGGVLVQYFGLGEVTGNITVLPPGLHDPEDGPRARIGTCGFERTGM 349 APMYREDQK AL KLG VLVQYFGLGEVTGNITVLPP LH+PEDGP +IGTCGFERTGM Sbjct: 307 APMYREDQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHEPEDGPHVKIGTCGFERTGM 366 Query: 350 QVSIQDDDGSELKAHETGEICVIGPGVFAGYYDNPEANAKAFRDGWFRTGDLGHMDEEGF 409 QV IQDD G E+ A ETGEICV GP VFAGYY+NPEANAK+FR+GWFRTGDLGHMD EGF Sbjct: 367 QVQIQDDQGREVNAFETGEICVCGPAVFAGYYENPEANAKSFRNGWFRTGDLGHMDAEGF 426 Query: 410 VYITGRASDMYISG------------------------------FWGEVGVAVCVAREGT 439 VYITGRASDMYISG WGEVGVAVCV R+G Sbjct: 427 VYITGRASDMYISGGSNVYPREVEEKLLQHPALVEVAILGVPDPMWGEVGVAVCVTRDGA 486 Query: 440 EAVAEAELAAYLAPKVPRYKMPKRFFFWEALPKSGYGKVPKRLIRDELEARGLL 493 V EAE+ A+L KV RYK+PKR FFWEALPKS YGK+ K+++R+ LE RGLL Sbjct: 487 -PVNEAEIIAFLDGKVSRYKLPKRVFFWEALPKSAYGKITKKMVREALEERGLL 539