BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0076.p (137 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_948168.1| hypothetical protein RPA2825 [Rhodopseudomonas ... 197 4e-49 ref|YP_486338.1| hypothetical protein RPB_2725 [Rhodopseudomonas... 193 7e-48 ref|YP_532636.1| hypothetical protein RPC_2769 [Rhodopseudomonas... 192 2e-47 ref|YP_781817.1| hypothetical protein RPE_2900 [Rhodopseudomonas... 191 4e-47 ref|YP_569899.1| hypothetical protein RPD_2770 [Rhodopseudomonas... 178 2e-43 >ref|NP_948168.1| hypothetical protein RPA2825 [Rhodopseudomonas palustris CGA009] ref|YP_001992144.1| hypothetical protein Rpal_3165 [Rhodopseudomonas palustris TIE-1] pdb|2GQB|A Chain A, Solution Structure Of A Conserved Unknown Protein Rpa2825 From Rhodopseudomonas Palustris; (Northeast Structural Genomics Consortium Target Rpt4; Ontario Centre For Structural Proteomics Target Rp2812 ) emb|CAE28267.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] gb|ACF01669.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 130 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 100/137 (72%), Positives = 110/137 (80%), Gaps = 7/137 (5%) Query: 1 MSIFGRIMGAIFGSSASAAPAGGTATSAAPAGGSGSASSSPAAVPAGAAPAQSVDVAPIL 60 MSIFG+IM AIFG SA+A+P G A + A G+ + P A P S+DVAPIL Sbjct: 1 MSIFGKIMSAIFGDSAAASPGGAQAPATTGAAGTAPTAPQPTAAP-------SIDVAPIL 53 Query: 61 DKAVAAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTNDSASMNIWLHKQV 120 DKAV AKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGY+GD NDSASMNIWLHKQV Sbjct: 54 DKAVKAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYSGDMNDSASMNIWLHKQV 113 Query: 121 MTKLAANGGKLPPDIKH 137 M+KL ANGGKLPP+IKH Sbjct: 114 MSKLVANGGKLPPEIKH 130 >ref|YP_486338.1| hypothetical protein RPB_2725 [Rhodopseudomonas palustris HaA2] gb|ABD07427.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 127 Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 101/136 (74%), Positives = 108/136 (79%), Gaps = 10/136 (7%) Query: 1 MSIFGRIMGAIFGSSASAAPAGGTATSAAPAGGSGSASSSPAAVPAGAAPAQSVDVAPIL 60 MSIFG+IMGAIFGSSA AAP G TS A +P PA + +VDVAPIL Sbjct: 1 MSIFGKIMGAIFGSSADAAPGGSAGTSTA----------APGTAPAPGSSGATVDVAPIL 50 Query: 61 DKAVAAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTNDSASMNIWLHKQV 120 D+AV AKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDT DSASMNIWLHKQV Sbjct: 51 DQAVKAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTGDSASMNIWLHKQV 110 Query: 121 MTKLAANGGKLPPDIK 136 M KLAANGGK+P D+K Sbjct: 111 MAKLAANGGKVPDDLK 126 >ref|YP_532636.1| hypothetical protein RPC_2769 [Rhodopseudomonas palustris BisB18] gb|ABD88317.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 127 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/137 (73%), Positives = 112/137 (81%), Gaps = 10/137 (7%) Query: 1 MSIFGRIMGAIFGSSASAAPAGGTATSAAPAGGSGSASSSPAAVPAGAAPAQSVDVAPIL 60 MSIFG+I+ AIFG+ A AAP G TA G SS+P + AGA P QSV+VAPIL Sbjct: 1 MSIFGKIISAIFGTHAEAAPGGTTA---------GGPSSAPGSSTAGA-PGQSVEVAPIL 50 Query: 61 DKAVAAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTNDSASMNIWLHKQV 120 DKAVA K EKLEWRTSIVDLMKALDIDSSLSARKELAKELG++GD N+SA+MNIWLHKQV Sbjct: 51 DKAVADKHEKLEWRTSIVDLMKALDIDSSLSARKELAKELGFSGDMNESATMNIWLHKQV 110 Query: 121 MTKLAANGGKLPPDIKH 137 M+KLAANGGKLP DIKH Sbjct: 111 MSKLAANGGKLPADIKH 127 >ref|YP_781817.1| hypothetical protein RPE_2900 [Rhodopseudomonas palustris BisA53] gb|ABJ06837.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 131 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 105/137 (76%), Positives = 112/137 (81%), Gaps = 8/137 (5%) Query: 1 MSIFGRIMGAIFGSSASAAPAGGTATSAAPAGGSGSASSSPA-AVPAGAAPAQSVDVAPI 59 MSIFG+IM AIFGS A AAP A+P G S + SPA + PAG APA SVDVAPI Sbjct: 1 MSIFGKIMNAIFGSGAEAAPG------ASPTGTSTGTAGSPAGSAPAGTAPA-SVDVAPI 53 Query: 60 LDKAVAAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTNDSASMNIWLHKQ 119 LDKAVA K EKLEWRTSIVDLMKALDIDSSLSARKELAKELGY+GDT DSASMNIWLHKQ Sbjct: 54 LDKAVADKKEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYSGDTGDSASMNIWLHKQ 113 Query: 120 VMTKLAANGGKLPPDIK 136 VM KLAANGGKLP ++K Sbjct: 114 VMAKLAANGGKLPAELK 130 >ref|YP_569899.1| hypothetical protein RPD_2770 [Rhodopseudomonas palustris BisB5] gb|ABE39998.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 127 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/137 (72%), Positives = 107/137 (78%), Gaps = 10/137 (7%) Query: 1 MSIFGRIMGAIFGSSASAAPAGGTATSAAPAGGSGSASSSPAAVPAGAAPAQSVDVAPIL 60 MSIFG+IM AIFGSSA AAP G T+ G + ++S A +VDV PIL Sbjct: 1 MSIFGKIMSAIFGSSADAAPGGTAGTTTTAPGTAPGQATSAA----------TVDVGPIL 50 Query: 61 DKAVAAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTNDSASMNIWLHKQV 120 D+AV AKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDT DSA+MNIWLHKQV Sbjct: 51 DQAVKAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYTGDTGDSATMNIWLHKQV 110 Query: 121 MTKLAANGGKLPPDIKH 137 M KLAANGGKLP DIKH Sbjct: 111 MAKLAANGGKLPADIKH 127