BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0067.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004302459.1| ABC branched-chain amino acid transporters A... 297 1e-78 ref|YP_004144555.1| ABC transporter [Mesorhizobium ciceri biovar... 280 2e-73 ref|YP_683752.1| branched-chain amino acid ABC transporter, ATP-... 266 3e-69 ref|ZP_02154649.1| branched-chain amino acid ABC transporter, AT... 263 2e-68 ref|ZP_08531159.1| putative branched-chain amino acid ABC transp... 220 2e-55 >ref|YP_004302459.1| ABC branched-chain amino acid transporters ATPase component [Polymorphum gilvum SL003B-26A1] gb|ADZ69160.1| ABC-type branched-chain amino acid transport systems ATPase component [Polymorphum gilvum SL003B-26A1] Length = 250 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 151/219 (68%), Positives = 179/219 (81%) Query: 1 LVARDISVQFEGLKALSNVTLAVPRGRIVGLIGPNGAGKTTLINVLTGFQPVGAGTVELE 60 L A +SV F GL+ALS+VTL++ GRI GLIGPNGAGKTTL+NVLTGFQ G V L+ Sbjct: 4 LSADGVSVAFAGLRALSHVTLSIEPGRITGLIGPNGAGKTTLVNVLTGFQGPTEGAVTLD 63 Query: 61 GETLSGIAAHKLRRKGVARTFQSGRLFRDLPVMDNLEVTGVGLGQSRPEAIGEAERVMAW 120 G L+G+ H++RR+GVARTFQ GRLFRDLPV+DNLEVTGVGLGQSR AI EAE ++ W Sbjct: 64 GAALTGLQPHEVRRRGVARTFQGGRLFRDLPVIDNLEVTGVGLGQSRAAAIAEAETMLDW 123 Query: 121 LGISHLSNTMAGALPYTDERRVAIGRAIMCTPRYLLLDEPAAGMSEHESHELAAIIRRIA 180 +GIS L++ +AG LPYTDERRVAIGRA+M P Y+LLDEPAAGMS E +LA +IRRIA Sbjct: 124 IGISPLADRIAGTLPYTDERRVAIGRALMGRPGYVLLDEPAAGMSAPEVADLAGLIRRIA 183 Query: 181 GELNVGVLLIEHNIGLVLELCERIYVLDSGEVIEAGPPA 219 GE+ GVLLIEHN+GLVL+LC+ I VLDSG VIE+GPPA Sbjct: 184 GEMGCGVLLIEHNVGLVLDLCDHIVVLDSGAVIESGPPA 222 >ref|YP_004144555.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV14505.1| ABC transporter related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 250 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 147/219 (67%), Positives = 175/219 (79%) Query: 1 LVARDISVQFEGLKALSNVTLAVPRGRIVGLIGPNGAGKTTLINVLTGFQPVGAGTVELE 60 L A ++SV F GLKALS+V L + GRI GLIGPNGAGKTTL+NVLTGFQ GT++L+ Sbjct: 4 LSAENVSVSFAGLKALSSVDLQITPGRISGLIGPNGAGKTTLVNVLTGFQAPTEGTIKLD 63 Query: 61 GETLSGIAAHKLRRKGVARTFQSGRLFRDLPVMDNLEVTGVGLGQSRPEAIGEAERVMAW 120 GE L+G+ H++RR+G+ARTFQ GRLFRDLPV+DNLEVTGVGLG SR AI EAE ++ W Sbjct: 64 GEALTGLKPHQVRRRGIARTFQGGRLFRDLPVLDNLEVTGVGLGMSRRAAIAEAEAMLDW 123 Query: 121 LGISHLSNTMAGALPYTDERRVAIGRAIMCTPRYLLLDEPAAGMSEHESHELAAIIRRIA 180 +GI L +AG LPYTDERRVAIGRA+M P Y+LLDEPAAGMS E+ EL+A+IR IA Sbjct: 124 IGIGALGTRIAGTLPYTDERRVAIGRALMGRPAYILLDEPAAGMSALEARELSALIRHIA 183 Query: 181 GELNVGVLLIEHNIGLVLELCERIYVLDSGEVIEAGPPA 219 +L GVLLIEHN+GLVL LC+ I VLDSG +IE GPPA Sbjct: 184 SDLGCGVLLIEHNVGLVLGLCQHIVVLDSGAIIEEGPPA 222 >ref|YP_683752.1| branched-chain amino acid ABC transporter, ATP-binding protein, putative [Roseobacter denitrificans OCh 114] gb|ABG33066.1| branched-chain amino acid ABC transporter, ATP-binding protein, putative [Roseobacter denitrificans OCh 114] Length = 242 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/216 (60%), Positives = 165/216 (76%) Query: 4 RDISVQFEGLKALSNVTLAVPRGRIVGLIGPNGAGKTTLINVLTGFQPVGAGTVELEGET 63 R I+V F G KA+ +VT+++ + I GLIGPNGAGKTT +NV+TGFQ +GTV L+GE+ Sbjct: 6 RSINVAFGGFKAIDDVTISLKKAEIAGLIGPNGAGKTTCVNVITGFQDPSSGTVTLDGES 65 Query: 64 LSGIAAHKLRRKGVARTFQSGRLFRDLPVMDNLEVTGVGLGQSRPEAIGEAERVMAWLGI 123 ++G A H +RR+G+ARTFQ+GRLF L V+DNL VTGVGLG SR + EA R++ W+G+ Sbjct: 66 ITGKAPHDIRRRGLARTFQAGRLFTGLDVLDNLAVTGVGLGHSRRASEDEAMRLLDWMGV 125 Query: 124 SHLSNTMAGALPYTDERRVAIGRAIMCTPRYLLLDEPAAGMSEHESHELAAIIRRIAGEL 183 +HL+ A LPYTDERRV I RA+M P +LLLDEPAAGMSE E+ +LA IIRRIA EL Sbjct: 126 AHLAELPAAGLPYTDERRVGIARALMFAPDFLLLDEPAAGMSEKEADDLARIIRRIADEL 185 Query: 184 NVGVLLIEHNIGLVLELCERIYVLDSGEVIEAGPPA 219 GVLLIEHN+GLVL L +YVLD+G++IE G A Sbjct: 186 ECGVLLIEHNVGLVLSLSNHVYVLDAGKIIEEGDKA 221 >ref|ZP_02154649.1| branched-chain amino acid ABC transporter, ATP-binding protein, putative [Oceanibulbus indolifex HEL-45] gb|EDQ03820.1| branched-chain amino acid ABC transporter, ATP-binding protein, putative [Oceanibulbus indolifex HEL-45] Length = 246 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 162/211 (76%) Query: 6 ISVQFEGLKALSNVTLAVPRGRIVGLIGPNGAGKTTLINVLTGFQPVGAGTVELEGETLS 65 ISV F G KAL +VT+++ + IVGLIGPNGAGKTT +N++TGFQ +GTV L+G+ ++ Sbjct: 8 ISVAFGGFKALDDVTISLKKAEIVGLIGPNGAGKTTCVNIITGFQDPTSGTVMLDGQDIN 67 Query: 66 GIAAHKLRRKGVARTFQSGRLFRDLPVMDNLEVTGVGLGQSRPEAIGEAERVMAWLGISH 125 A + +RR+G+ARTFQ+GRLF L V+DNL VTGVGLG SR + EA RV++W+G H Sbjct: 68 AKAPYDIRRRGLARTFQAGRLFSGLDVLDNLAVTGVGLGHSRRASEDEALRVLSWMGAGH 127 Query: 126 LSNTMAGALPYTDERRVAIGRAIMCTPRYLLLDEPAAGMSEHESHELAAIIRRIAGELNV 185 L+ A LPYTDERRV I RA+M P YLLLDEPAAGMSE E+ +LA IIRRIA ELN Sbjct: 128 LAELPAAGLPYTDERRVGIARALMFAPDYLLLDEPAAGMSETEADDLAQIIRRIADELNC 187 Query: 186 GVLLIEHNIGLVLELCERIYVLDSGEVIEAG 216 GVLLIEHN+GLVL L +YVLD+G++IE G Sbjct: 188 GVLLIEHNVGLVLSLSNHVYVLDAGKIIEEG 218 >ref|ZP_08531159.1| putative branched-chain amino acid ABC transporter, ATP-binding protein [Agrobacterium sp. ATCC 31749] gb|EGL62097.1| putative branched-chain amino acid ABC transporter, ATP-binding protein [Agrobacterium sp. ATCC 31749] Length = 251 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 113/251 (45%), Positives = 159/251 (63%), Gaps = 10/251 (3%) Query: 1 LVARDISVQFEGLKALSNVTLAVPRGRIVGLIGPNGAGKTTLINVLTGFQPVGAGTVELE 60 L ARDI V F G+KAL+ VTL + G I+GLIGPNGAGKTTL+NVL+GFQ GT+EL+ Sbjct: 9 LEARDIHVVFGGIKALTGVTLTLNAGDILGLIGPNGAGKTTLVNVLSGFQKPKPGTIELD 68 Query: 61 GETLSGIAAHKLRRKGVARTFQSGRLFRDLPVMDNLEVTGVGLGQSRPEAIGEAERVMAW 120 G +S ++ K+ + G+ R+FQ+ RLFR L V++NL V G+G+G SR EA +A ++ W Sbjct: 69 GRDVSNLSPRKMAQAGIGRSFQAARLFRKLTVLENLTVAGLGIGLSRKEATSQARDILDW 128 Query: 121 LGISHLSNTMAGALPYTDERRVAIGRAIMCTPRYLLLDEPAAGMSEHESHELAAIIRRIA 180 +G + G+LPY+DERR++I RA+ P + LLDEPA+GM+E E L I I Sbjct: 129 IGYRQGHDLQCGSLPYSDERRISIARALALQPSFTLLDEPASGMNEQECELLMETITSIP 188 Query: 181 GELNVGVLLIEHNIGLVLELCERIYVLDSGEVIEAGPPAXTAMRCGTPIWVRSATSRFRR 240 + GV+LIEHN+ +++ +C RI+VLD G + G P+ V++ + R Sbjct: 189 KKFGCGVMLIEHNMQVIMGVCHRIHVLDGGRSLAEGSPSE----------VKNDPNVLRA 238 Query: 241 SPPKRPSRHDA 251 R SR DA Sbjct: 239 YLGDRASRKDA 249