BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0066.p (207 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004302460.1| branched chain amino acid ABC transporter AT... 275 3e-72 ref|YP_004144556.1| ABC transporter [Mesorhizobium ciceri biovar... 271 3e-71 ref|ZP_02154650.1| branched chain amino acid ABC transporter, AT... 253 1e-65 ref|YP_683753.1| branched chain amino acid ABC transporter, ATP-... 249 2e-64 ref|ZP_03506361.1| ABC transporter related protein [Rhizobium et... 210 1e-52 >ref|YP_004302460.1| branched chain amino acid ABC transporter ATP-binding protein [Polymorphum gilvum SL003B-26A1] gb|ADZ69161.1| Branched chain amino acid ABC transporter, ATP-binding protein, putative [Polymorphum gilvum SL003B-26A1] Length = 244 Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 138/211 (65%), Positives = 166/211 (78%), Gaps = 4/211 (1%) Query: 1 VTGPNGAGKSTLLNAIAGVVPPGSGSIMIDGAKITGAAPEDIARRGFSLVPEGRNVFGAL 60 VTGPNGAGKS+LL AIAGV PP G I + G ITG APEDIAR G S+VPEGR VFG+L Sbjct: 34 VTGPNGAGKSSLLRAIAGVTPPAGGRIDLAGNDITGRAPEDIARLGLSMVPEGREVFGSL 93 Query: 61 TIEENLKVGTGMRAD----RKKIADDLDQVYEEFPMLAERRHTPAGMLSGGQQQMLVIGR 116 T+EENL +GTGM A R + A +L+ +Y+ FP+L ERRH AG+LSGGQQQMLVIGR Sbjct: 94 TVEENLLLGTGMHARERNWRSRAASELELIYDAFPILKERRHGQAGLLSGGQQQMLVIGR 153 Query: 117 ALMAAPRIMAIDEPSLGLAPKIIDQVYEILVRLRTQRKLTLLIVEQSSTRAMMTGGRMVL 176 ALM PR++AIDEPSLGLAP IIDQVY+ L+ LR Q L+LLIVEQSSTRAMM GGRM+L Sbjct: 154 ALMTNPRLIAIDEPSLGLAPNIIDQVYDRLIALRAQHALSLLIVEQSSTRAMMVGGRMIL 213 Query: 177 IRGGRIVLEGPAADMVRDDRLKQSYFGFGDH 207 +RGG ++L+G A M + + L+ +YFG+GDH Sbjct: 214 MRGGEVLLDGDARAMGQSEALQAAYFGYGDH 244 >ref|YP_004144556.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV14506.1| ABC transporter related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 244 Score = 271 bits (694), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/211 (65%), Positives = 166/211 (78%), Gaps = 4/211 (1%) Query: 1 VTGPNGAGKSTLLNAIAGVVPPGSGSIMIDGAKITGAAPEDIARRGFSLVPEGRNVFGAL 60 +TGPNGAGKS+LL AIAGV P G I + G +ITG APE+IAR GFS+VPEGR+VFG+L Sbjct: 34 ITGPNGAGKSSLLRAIAGVTPVAGGRIDLAGHEITGQAPENIARLGFSMVPEGRDVFGSL 93 Query: 61 TIEENLKVGTGM----RADRKKIADDLDQVYEEFPMLAERRHTPAGMLSGGQQQMLVIGR 116 T EENL VGTGM R R + AD+L+ VY FPML ERRH AG+LSGGQQQMLVIGR Sbjct: 94 TTEENLLVGTGMHARERGWRSRAADELEAVYATFPMLKERRHGQAGLLSGGQQQMLVIGR 153 Query: 117 ALMAAPRIMAIDEPSLGLAPKIIDQVYEILVRLRTQRKLTLLIVEQSSTRAMMTGGRMVL 176 ALM PR++AIDEPSLGLAP I DQVYE L+ LR QR+LTLLIVEQSS RAMM GGRM+L Sbjct: 154 ALMTNPRLVAIDEPSLGLAPNINDQVYERLIALRAQRQLTLLIVEQSSARAMMVGGRMIL 213 Query: 177 IRGGRIVLEGPAADMVRDDRLKQSYFGFGDH 207 +RGG+IVL+G A + + ++ +YFG+ D+ Sbjct: 214 MRGGQIVLDGDARTLGNGEAIQAAYFGYEDN 244 >ref|ZP_02154650.1| branched chain amino acid ABC transporter, ATP-binding protein, putative [Oceanibulbus indolifex HEL-45] gb|EDQ03821.1| branched chain amino acid ABC transporter, ATP-binding protein, putative [Oceanibulbus indolifex HEL-45] Length = 244 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 150/203 (73%) Query: 1 VTGPNGAGKSTLLNAIAGVVPPGSGSIMIDGAKITGAAPEDIARRGFSLVPEGRNVFGAL 60 ++GPNGAGKS+LL AI G V G I +DG + G +PE IAR G ++VPEGR VFG L Sbjct: 34 ISGPNGAGKSSLLKAICGAVATTHGRIEVDGDVLNGRSPEAIARLGLTMVPEGREVFGTL 93 Query: 61 TIEENLKVGTGMRADRKKIADDLDQVYEEFPMLAERRHTPAGMLSGGQQQMLVIGRALMA 120 T+EENL+VGTG+R D+ I D+D +Y+ FP+L ERRH AG LSGGQQQML IGR LM Sbjct: 94 TVEENLRVGTGIRKDKAAIETDIDGIYQSFPILGERRHANAGALSGGQQQMLAIGRGLMT 153 Query: 121 APRIMAIDEPSLGLAPKIIDQVYEILVRLRTQRKLTLLIVEQSSTRAMMTGGRMVLIRGG 180 P++M +DEPSLGLAP I+DQVYE LV L+ +R LTL+IVEQSS RA GGRMVL+RGG Sbjct: 154 NPKLMMVDEPSLGLAPNIVDQVYETLVNLQAERGLTLIIVEQSSARAARVGGRMVLLRGG 213 Query: 181 RIVLEGPAADMVRDDRLKQSYFG 203 + +G AA D LK++YFG Sbjct: 214 HVAGDGDAAGFAESDLLKEAYFG 236 >ref|YP_683753.1| branched chain amino acid ABC transporter, ATP-binding protein, putative [Roseobacter denitrificans OCh 114] gb|ABG33067.1| branched chain amino acid ABC transporter, ATP-binding protein, putative [Roseobacter denitrificans OCh 114] Length = 244 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 150/203 (73%) Query: 1 VTGPNGAGKSTLLNAIAGVVPPGSGSIMIDGAKITGAAPEDIARRGFSLVPEGRNVFGAL 60 ++GPNGAGKS+LL AI G VP G I +DG + G +PE IAR G ++VPEGR +FG L Sbjct: 34 ISGPNGAGKSSLLKAICGAVPTTHGRIEVDGDLLNGRSPEMIARLGLTMVPEGREIFGTL 93 Query: 61 TIEENLKVGTGMRADRKKIADDLDQVYEEFPMLAERRHTPAGMLSGGQQQMLVIGRALMA 120 T+EENL+VGTG+R D I D++ VY FP+L ERR+ AG LSGGQQQML IGR LM Sbjct: 94 TVEENLRVGTGIRRDTAAIETDIEDVYGSFPILGERRNANAGALSGGQQQMLAIGRGLMT 153 Query: 121 APRIMAIDEPSLGLAPKIIDQVYEILVRLRTQRKLTLLIVEQSSTRAMMTGGRMVLIRGG 180 P++M +DEPSLGLAP I+DQVYE LVRL+ +R LTL+IVEQSS RA GGRMVL+RGG Sbjct: 154 NPKLMLVDEPSLGLAPNIVDQVYETLVRLQNERGLTLIIVEQSSARAARVGGRMVLLRGG 213 Query: 181 RIVLEGPAADMVRDDRLKQSYFG 203 +V +G A D LK++YFG Sbjct: 214 NVVGDGDAGKFAESDLLKEAYFG 236 >ref|ZP_03506361.1| ABC transporter related protein [Rhizobium etli Brasil 5] Length = 257 Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 107/204 (52%), Positives = 142/204 (69%) Query: 3 GPNGAGKSTLLNAIAGVVPPGSGSIMIDGAKITGAAPEDIARRGFSLVPEGRNVFGALTI 62 GPNGAGKS+ L AIAG +P SG++ DG I APE IAR G S VPE R+ F +LT+ Sbjct: 44 GPNGAGKSSTLGAIAGGIPIASGTVRFDGHSIEALAPEAIARLGLSFVPEARHPFSSLTV 103 Query: 63 EENLKVGTGMRADRKKIADDLDQVYEEFPMLAERRHTPAGMLSGGQQQMLVIGRALMAAP 122 EENL +G+ MR +R A +L++VY FP L R PAG LSGG+QQMLVIGRALM +P Sbjct: 104 EENLLIGSLMRRNRVVAASNLERVYGYFPRLRVRSRQPAGKLSGGEQQMLVIGRALMTSP 163 Query: 123 RIMAIDEPSLGLAPKIIDQVYEILVRLRTQRKLTLLIVEQSSTRAMMTGGRMVLIRGGRI 182 R+M IDEPSLGLAPKI+++VYE+L R+R + +T+++ EQSS R M ++++R GR+ Sbjct: 164 RLMLIDEPSLGLAPKIVEEVYEMLRRIRDEAGVTIVVNEQSSRRVMKFAENILVLRDGRV 223 Query: 183 VLEGPAADMVRDDRLKQSYFGFGD 206 L G A + + L +YFG G+ Sbjct: 224 QLRGAPATIDQGQALHHAYFGVGN 247