BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0044.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206866.1| hydroxypyruvate isomerase [Bradyrhizobium sp... 426 e-117 ref|NP_769807.1| hydroxypyruvate isomerase protein [Bradyrhizobi... 416 e-114 ref|ZP_08631070.1| hydroxypyruvate isomerase [Bradyrhizobiaceae ... 416 e-114 ref|YP_003452489.1| hydroxypyruvate isomerase [Azospirillum sp. ... 378 e-103 ref|YP_004845518.1| hydroxypyruvate isomerase [Pseudogulbenkiani... 360 9e-98 >ref|YP_001206866.1| hydroxypyruvate isomerase [Bradyrhizobium sp. ORS 278] emb|CAL78649.1| hydroxypyruvate isomerase [Bradyrhizobium sp. ORS 278] Length = 263 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/261 (77%), Positives = 226/261 (86%) Query: 1 VPQFAANLTMLFNELPFLDRFAAAKAAGFNAVEYLFPYDFEKGALREELARCGLTQVLHN 60 +P FAANLTMLFNELPFL+RFAAAKAAGF+ VEYLFPY+F+K LRE+LAR GLTQVLHN Sbjct: 1 MPHFAANLTMLFNELPFLERFAAAKAAGFSGVEYLFPYEFDKAELREQLARHGLTQVLHN 60 Query: 61 LPAGNWAAGERGIAILRNRVDEFRDGVVRAIDYAKALDCRQLNCLVGIAPADTDRAELQD 120 LPAGNWAAGERGIAIL +RVD+FR+GV R I+YA+ALDCRQLNCLVGIAP D EL Sbjct: 61 LPAGNWAAGERGIAILPDRVDDFREGVRRGIEYARALDCRQLNCLVGIAPDGADPRELNQ 120 Query: 121 VLVSNLRFAAGALGQHGIKLLVEPINTLDIPGFFLNRTEQAVQLISEVGSSNLFIQYDIY 180 L+ NLRFAA AL GIKLL+EPINTLDIPGFFLNRT QA+QLIS+V S NLF+QYDIY Sbjct: 121 TLLRNLRFAATALKAQGIKLLIEPINTLDIPGFFLNRTAQALQLISDVESDNLFVQYDIY 180 Query: 181 HMQIMEGDIARTLQKHLGRIAHVQLADNPGRFEPGTGEINYSYLFKHLDSIGYRGWIGCE 240 HMQIMEGD+ARTLQKHL RIAH+QLADNPGR EPGTGEINY+YLF+HLD+IGY GW+GCE Sbjct: 181 HMQIMEGDLARTLQKHLARIAHIQLADNPGRHEPGTGEINYAYLFRHLDAIGYAGWVGCE 240 Query: 241 YKPRTTTLESLGWHAAQTFVT 261 YKPRT T E LGW + VT Sbjct: 241 YKPRTKTEEGLGWLTERAAVT 261 >ref|NP_769807.1| hydroxypyruvate isomerase protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48432.1| hyi [Bradyrhizobium japonicum USDA 110] Length = 261 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/261 (79%), Positives = 228/261 (87%) Query: 1 VPQFAANLTMLFNELPFLDRFAAAKAAGFNAVEYLFPYDFEKGALREELARCGLTQVLHN 60 +P+FAANLTMLFNE+PFLDRFAAAKAAGF VEYLFPYDF+K LRE+L GLTQVLHN Sbjct: 1 MPKFAANLTMLFNEMPFLDRFAAAKAAGFAGVEYLFPYDFDKAQLREQLEAHGLTQVLHN 60 Query: 61 LPAGNWAAGERGIAILRNRVDEFRDGVVRAIDYAKALDCRQLNCLVGIAPADTDRAELQD 120 LPAGNWA GERGIAIL +R EFRDGV RAIDYAKALDC QLNCLVGIAPAD D EL + Sbjct: 61 LPAGNWAGGERGIAILPDRTAEFRDGVFRAIDYAKALDCDQLNCLVGIAPADADPRELNE 120 Query: 121 VLVSNLRFAAGALGQHGIKLLVEPINTLDIPGFFLNRTEQAVQLISEVGSSNLFIQYDIY 180 LV NLRFAA L + I+LLVEPINTLDIPGF LN TEQAVQLISEV S+NLFIQYD+Y Sbjct: 121 TLVGNLRFAASTLARENIRLLVEPINTLDIPGFHLNGTEQAVQLISEVRSNNLFIQYDVY 180 Query: 181 HMQIMEGDIARTLQKHLGRIAHVQLADNPGRFEPGTGEINYSYLFKHLDSIGYRGWIGCE 240 HMQIMEGD+ART+Q++L +IAH+QLADNPGR EPGTGEINY +LF+HLD+IGYRGWIGCE Sbjct: 181 HMQIMEGDLARTMQEYLPQIAHIQLADNPGRHEPGTGEINYPFLFRHLDAIGYRGWIGCE 240 Query: 241 YKPRTTTLESLGWHAAQTFVT 261 YKPRTTTLE L WHAAQTF T Sbjct: 241 YKPRTTTLEGLSWHAAQTFET 261 >ref|ZP_08631070.1| hydroxypyruvate isomerase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06171.1| hydroxypyruvate isomerase [Bradyrhizobiaceae bacterium SG-6C] Length = 261 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/258 (75%), Positives = 220/258 (85%) Query: 1 VPQFAANLTMLFNELPFLDRFAAAKAAGFNAVEYLFPYDFEKGALREELARCGLTQVLHN 60 +P+FAANLTMLFNE PFLDRFAAAK AGF VEYLFPYDFEKG L E L + GLTQVLHN Sbjct: 1 MPKFAANLTMLFNESPFLDRFAAAKEAGFGGVEYLFPYDFEKGVLAERLQQYGLTQVLHN 60 Query: 61 LPAGNWAAGERGIAILRNRVDEFRDGVVRAIDYAKALDCRQLNCLVGIAPADTDRAELQD 120 LPAGNW+AGERGIAIL +RV EFRDGV RA++YAKALDCRQ+NCL GIAPA D A+L+ Sbjct: 61 LPAGNWSAGERGIAILPDRVAEFRDGVARAVEYAKALDCRQVNCLAGIAPAGADPAKLRA 120 Query: 121 VLVSNLRFAAGALGQHGIKLLVEPINTLDIPGFFLNRTEQAVQLISEVGSSNLFIQYDIY 180 V V NLR+AA L ++ IKLL+EPINT DIPGFFLN TEQA+Q+ISEVGS NLF+QYDIY Sbjct: 121 VFVENLRYAADTLAKNNIKLLIEPINTRDIPGFFLNGTEQAIQIISEVGSENLFVQYDIY 180 Query: 181 HMQIMEGDIARTLQKHLGRIAHVQLADNPGRFEPGTGEINYSYLFKHLDSIGYRGWIGCE 240 HMQIMEGD+A T+ KHL RIAH+QLADNPGR EPGTGEINY +LF+ LD IGYRGWIGCE Sbjct: 181 HMQIMEGDLAPTMTKHLDRIAHIQLADNPGRNEPGTGEINYPFLFRTLDEIGYRGWIGCE 240 Query: 241 YKPRTTTLESLGWHAAQT 258 YKP+TTT E LGW+ T Sbjct: 241 YKPKTTTPEGLGWYEPHT 258 >ref|YP_003452489.1| hydroxypyruvate isomerase [Azospirillum sp. B510] dbj|BAI75945.1| hydroxypyruvate isomerase [Azospirillum sp. B510] Length = 264 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/253 (74%), Positives = 207/253 (81%) Query: 3 QFAANLTMLFNELPFLDRFAAAKAAGFNAVEYLFPYDFEKGALREELARCGLTQVLHNLP 62 QFAANLTML+NE PFLDRFAAA AGF VEYLFPYDF AL E+L R GLTQVLHNLP Sbjct: 3 QFAANLTMLYNEHPFLDRFAAAADAGFRGVEYLFPYDFAADALAEKLRRHGLTQVLHNLP 62 Query: 63 AGNWAAGERGIAILRNRVDEFRDGVVRAIDYAKALDCRQLNCLVGIAPADTDRAELQDVL 122 AGNW GERGIAIL +RV EFRDGV RAIDYA L C+Q+NCLVGI P D A Q L Sbjct: 63 AGNWGGGERGIAILPDRVQEFRDGVARAIDYAGTLGCKQVNCLVGILPQGADAATAQSTL 122 Query: 123 VSNLRFAAGALGQHGIKLLVEPINTLDIPGFFLNRTEQAVQLISEVGSSNLFIQYDIYHM 182 V NL +AA AL GIKLLVEPINT DIPGF LNRT+QA+ LI +VGS NLF+QYDIYHM Sbjct: 123 VGNLAYAADALAGAGIKLLVEPINTRDIPGFHLNRTKQALDLIDQVGSGNLFLQYDIYHM 182 Query: 183 QIMEGDIARTLQKHLGRIAHVQLADNPGRFEPGTGEINYSYLFKHLDSIGYRGWIGCEYK 242 QIMEGD+ART++ +L RIAHVQLADNPGRFEPGTGEINY +LFKHLD+IGY GW+GCEYK Sbjct: 183 QIMEGDLARTIEANLARIAHVQLADNPGRFEPGTGEINYPFLFKHLDAIGYGGWVGCEYK 242 Query: 243 PRTTTLESLGWHA 255 P+TTT E LGW A Sbjct: 243 PKTTTTEGLGWLA 255 >ref|YP_004845518.1| hydroxypyruvate isomerase [Pseudogulbenkiania sp. NH8B] dbj|BAK75104.1| hydroxypyruvate isomerase [Pseudogulbenkiania sp. NH8B] Length = 259 Score = 360 bits (925), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 172/258 (66%), Positives = 202/258 (78%) Query: 1 VPQFAANLTMLFNELPFLDRFAAAKAAGFNAVEYLFPYDFEKGALREELARCGLTQVLHN 60 +P+FAANLTMLF ELPFL+RF AA AGF VEYLFPY F K L E+LAR GL QVLHN Sbjct: 1 MPKFAANLTMLFTELPFLERFQAAAEAGFQGVEYLFPYAFAKEVLTEQLARHGLVQVLHN 60 Query: 61 LPAGNWAAGERGIAILRNRVDEFRDGVVRAIDYAKALDCRQLNCLVGIAPADTDRAELQD 120 LPAGNW AGERGIA +RVDEF+DGV RAIDYA+AL C QLNCL GIAPA + L + Sbjct: 61 LPAGNWEAGERGIACHPDRVDEFQDGVGRAIDYARALGCTQLNCLAGIAPAGVPQDTLHE 120 Query: 121 VLVSNLRFAAGALGQHGIKLLVEPINTLDIPGFFLNRTEQAVQLISEVGSSNLFIQYDIY 180 V+NLRFAA L + G++LL+EPINT DIPGF+LNRT QA ++ VGS NLFIQYDIY Sbjct: 121 TFVANLRFAAAQLQRAGLRLLIEPINTWDIPGFYLNRTAQAAAILDAVGSDNLFIQYDIY 180 Query: 181 HMQIMEGDIARTLQKHLGRIAHVQLADNPGRFEPGTGEINYSYLFKHLDSIGYRGWIGCE 240 H Q MEG++A T+ K+L RIAH+QLADNPGR EPG+GEINY +L +H+D +GY GWIGCE Sbjct: 181 HAQRMEGELAGTIAKYLPRIAHIQLADNPGRHEPGSGEINYPWLLRHIDQLGYDGWIGCE 240 Query: 241 YKPRTTTLESLGWHAAQT 258 YKP ++T + LGW A T Sbjct: 241 YKPASSTRDGLGWIKALT 258