BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0041.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001206884.1| hypothetical protein BRADO4965 [Bradyrhizobi...   143   9e-33
ref|YP_001239121.1| hypothetical protein BBta_3097 [Bradyrhizobi...   142   1e-32
ref|NP_769788.1| hypothetical protein bll3148 [Bradyrhizobium ja...   141   3e-32
ref|ZP_08631055.1| inosine-5'-monophosphate dehydrogenase [Brady...   123   8e-27
ref|YP_003450409.1| hypothetical protein AZL_a03340 [Azospirillu...   105   2e-21

>ref|YP_001206884.1| hypothetical protein BRADO4965 [Bradyrhizobium sp. ORS 278]
 emb|CAL78667.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
           ORS 278]
          Length = 139

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 71/137 (51%), Positives = 96/137 (70%)

Query: 1   MYVGDILRNNSPHLVAIGSNETVSIAANLMYASNVGALVVRSASRSKDAAVVGMFSERDV 60
           M VGDILRN +  ++ +  NETV +AA LM ASNV ALVV+   R++     GMF+ERDV
Sbjct: 1   MKVGDILRNKTARVITVRMNETVGVAAQLMRASNVSALVVKDVVRTEGNTAAGMFTERDV 60

Query: 61  VAVIAERGTNGLAMKVAQFISPRPLVSCNSQDALTDVERLMARHGIRHIPVIDNGRLVGV 120
           V  IAE G  G+ M+V+Q ISP+ L+SC+++D+L  V  LM  H IRH+PVI +  L GV
Sbjct: 61  VRAIAEHGAAGVTMRVSQLISPQRLISCSTEDSLEHVRHLMNVHHIRHLPVIVDFALAGV 120

Query: 121 VSMRDITLAFEEAACAA 137
           +SMRD++ AF+EA  +A
Sbjct: 121 ISMRDVSSAFDEAEASA 137


>ref|YP_001239121.1| hypothetical protein BBta_3097 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35215.1| hypothetical protein BBta_3097 [Bradyrhizobium sp. BTAi1]
          Length = 139

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/135 (52%), Positives = 93/135 (68%)

Query: 1   MYVGDILRNNSPHLVAIGSNETVSIAANLMYASNVGALVVRSASRSKDAAVVGMFSERDV 60
           M VGDILRN +  ++ +  NETV +AA LM A NV ALVV+   R++     GMF+ERDV
Sbjct: 1   MKVGDILRNKTARVITVRMNETVGVAAQLMRAGNVSALVVKDVVRTEGNTAAGMFTERDV 60

Query: 61  VAVIAERGTNGLAMKVAQFISPRPLVSCNSQDALTDVERLMARHGIRHIPVIDNGRLVGV 120
           V  IAE G  G+ +KV+Q ISP+ L+SC++ D L  V  LM  H IRH+PVID+  L GV
Sbjct: 61  VRAIAEHGAAGVNLKVSQLISPQRLISCSTTDTLEHVRHLMNVHHIRHLPVIDDFALAGV 120

Query: 121 VSMRDITLAFEEAAC 135
           +SMRD++ AF+EAA 
Sbjct: 121 ISMRDVSSAFDEAAA 135


>ref|NP_769788.1| hypothetical protein bll3148 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48413.1| bll3148 [Bradyrhizobium japonicum USDA 110]
          Length = 142

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 91/133 (68%)

Query: 1   MYVGDILRNNSPHLVAIGSNETVSIAANLMYASNVGALVVRSASRSKDAAVVGMFSERDV 60
           M VGDILR  +P +V +  NETV IAA LM A+N+ ALVV+   RS+    VGMF+ERDV
Sbjct: 1   MLVGDILRKKTPRVVTVRMNETVGIAAKLMRANNISALVVKDVVRSEGNTAVGMFTERDV 60

Query: 61  VAVIAERGTNGLAMKVAQFISPRPLVSCNSQDALTDVERLMARHGIRHIPVIDNGRLVGV 120
           V  +AE G N + +KV+Q +S + LVSC S D +  V  LM RH IRH+PVID+  L+ V
Sbjct: 61  VRAVAEHGANAINVKVSQLVSVQQLVSCTSIDTIEHVRHLMNRHHIRHLPVIDDYSLISV 120

Query: 121 VSMRDITLAFEEA 133
           +SMRDI  A +EA
Sbjct: 121 ISMRDIAAAVDEA 133


>ref|ZP_08631055.1| inosine-5'-monophosphate dehydrogenase [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP06156.1| inosine-5'-monophosphate dehydrogenase [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 148

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/126 (51%), Positives = 83/126 (65%)

Query: 1   MYVGDILRNNSPHLVAIGSNETVSIAANLMYASNVGALVVRSASRSKDAAVVGMFSERDV 60
           M VGDIL   +  +  +  NETV+ AA L+   N+ ALVV+   R++    VGMF+ERDV
Sbjct: 1   MRVGDILNRKNTRIATVRMNETVATAARLLRDENISALVVKDVCRTEGNVAVGMFTERDV 60

Query: 61  VAVIAERGTNGLAMKVAQFISPRPLVSCNSQDALTDVERLMARHGIRHIPVIDNGRLVGV 120
           V  +AE G  GL+MKV+  IS + LVSC+S D L  V  LM  H IRH+PVID+  LVGV
Sbjct: 61  VRAVAEHGAAGLSMKVSALISVQKLVSCHSTDLLDYVRELMNDHHIRHLPVIDDHTLVGV 120

Query: 121 VSMRDI 126
           +SMRDI
Sbjct: 121 ISMRDI 126


>ref|YP_003450409.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
 dbj|BAI73865.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
          Length = 151

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 2/133 (1%)

Query: 1   MYVGDILRNNSPHLVAIGSNETVSIAANLMYASNVGALVVRSASRSKDAAVVGMFSERDV 60
           M V  ILR     +VA+ ++ TV+ A  LM A N+ AL+V+   R++   + G+ SERD+
Sbjct: 1   MKVEHILRTKEARVVAVRTSATVADAIRLMKAENISALIVKDVCRTEGNTLAGVLSERDI 60

Query: 61  VAVIAERGTNGLAMKVAQFISPRPLVSCNSQDALTDVERLMARHGIRHIPVIDNGRLVGV 120
           V  + ERG   LAM V+Q ++ +P V+C   D++ +   LM +H IRH+PV+++G LVGV
Sbjct: 61  VHALLERGAPLLAMPVSQLMTRQP-VTCAPSDSVREALHLMDKHHIRHLPVLEDGHLVGV 119

Query: 121 VSMRDIT-LAFEE 132
           VS RD T L  +E
Sbjct: 120 VSARDFTRLQLQE 132