BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0020.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_571628.1| ISSpo6, transposase orf A [Nitrobacter hamburge...   184   3e-45
ref|ZP_01048327.1| putative transposase of insertion sequence IS...   166   1e-39
ref|YP_001990074.1| Transposase and inactivated derivatives-like...   120   5e-26
ref|YP_001676674.1| ISSpo6, transposase orf A [Caulobacter sp. K...   118   2e-25
ref|YP_001683754.1| ISSpo6, transposase orf A [Caulobacter sp. K...   111   4e-23

>ref|YP_571628.1| ISSpo6, transposase orf A [Nitrobacter hamburgensis X14]
 gb|ABE64796.1| ISSpo6, transposase orf A [Nitrobacter hamburgensis X14]
          Length = 120

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/103 (89%), Positives = 98/103 (95%)

Query: 1   VVAAIDGGLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLIL 60
           VVAAIDGGLSCR+AAER+GVSAASAIRWR+RLKEVGDIVPKRQGGDRKSQRIEAHSQLIL
Sbjct: 13  VVAAIDGGLSCRQAAERYGVSAASAIRWRTRLKEVGDIVPKRQGGDRKSQRIEAHSQLIL 72

Query: 61  DAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           DAVTAKPDITLAEL++LLKRRGISAGIASLWRFF   +  LKK
Sbjct: 73  DAVTAKPDITLAELRDLLKRRGISAGIASLWRFFQRRKITLKK 115


>ref|ZP_01048327.1| putative transposase of insertion sequence ISRm2011-2, orfA protein
           [Nitrobacter sp. Nb-311A]
 gb|EAQ33694.1| putative transposase of insertion sequence ISRm2011-2, orfA protein
           [Nitrobacter sp. Nb-311A]
          Length = 127

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/103 (80%), Positives = 90/103 (87%)

Query: 1   VVAAIDGGLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLIL 60
           V+AAIDGGLSCR+AAE FGVSAASAIRWR RLKE GDIVPKRQGGDR+SQRIE +SQLIL
Sbjct: 13  VIAAIDGGLSCRQAAEHFGVSAASAIRWRGRLKEAGDIVPKRQGGDRRSQRIETYSQLIL 72

Query: 61  DAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           DAV  KPDITLA L++LLKRRGISA IASLWRFF   +  LKK
Sbjct: 73  DAVAVKPDITLAGLRDLLKRRGISASIASLWRFFQRRKITLKK 115


>ref|YP_001990074.1| Transposase and inactivated derivatives-like protein
           [Rhodopseudomonas palustris TIE-1]
 gb|ACE99598.1| Transposase and inactivated derivatives-like protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 315

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 76/106 (71%)

Query: 1   VVAAIDGGLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLIL 60
           V+AAI GGLSCR+AAE+FGVSA+SAIRWR+  +  GD  PK  GGDR+S RIEAH+  IL
Sbjct: 13  VLAAIAGGLSCRQAAEQFGVSASSAIRWRAMQRRQGDARPKALGGDRRSGRIEAHAPSIL 72

Query: 61  DAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKKDSA 106
             V  KPDITL E+Q  L  +G++ GI +LWRFF   R   KK +A
Sbjct: 73  ALVETKPDITLHEIQAALAEQGVAVGIGTLWRFFARRRITFKKKTA 118


>ref|YP_001676674.1| ISSpo6, transposase orf A [Caulobacter sp. K31]
 gb|ABZ74360.1| ISSpo6, transposase orf A [Caulobacter sp. K31]
          Length = 128

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/113 (59%), Positives = 77/113 (68%), Gaps = 2/113 (1%)

Query: 1   VVAAIDGGLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLIL 60
           V+AAIDGGLSCR AA RFGVSAASAIRWR      GD  P   GGDR+S  IE ++ +IL
Sbjct: 13  VIAAIDGGLSCRAAAARFGVSAASAIRWRQLTLSQGDARPGALGGDRRSGLIEQNADVIL 72

Query: 61  DAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKKDSARRRATER 113
             V AKPDITLAELQ  L  RG++   +S+WRFFN  R  LKK  +RR  T R
Sbjct: 73  AMVEAKPDITLAELQAGLAERGVAVSGSSIWRFFNRRRITLKK--SRRTRTNR 123


>ref|YP_001683754.1| ISSpo6, transposase orf A [Caulobacter sp. K31]
 gb|ABZ71256.1| ISSpo6, transposase orf A [Caulobacter sp. K31]
          Length = 128

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 70/103 (67%)

Query: 1   VVAAIDGGLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLIL 60
           V+AAIDGGLSCR AA RFGV AASAIRWR   ++ GD  P   GGD +S  IE H+ L  
Sbjct: 13  VIAAIDGGLSCRAAAARFGVIAASAIRWRQLTRKQGDARPGPLGGDHRSGYIEKHADLTP 72

Query: 61  DAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
             + AK DITLAEL+  L  RG++ G ASLWRFF+  R  LKK
Sbjct: 73  ALLDAKSDITLAELRAALAERGVAVGAASLWRFFDRRRIALKK 115