BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0058.0034.p         (145 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770381.1| hypothetical protein blr3741 [Bradyrhizobium ja...   252   1e-65
ref|YP_001239463.1| hypothetical protein BBta_3464 [Bradyrhizobi...   241   2e-62
ref|YP_001206681.1| putative dioxygenase [Bradyrhizobium sp. ORS...   240   5e-62
ref|YP_317828.1| glyoxalase/bleomycin resistance protein/dioxyge...   211   3e-53
ref|YP_576753.1| glyoxalase/bleomycin resistance protein/dioxyge...   210   5e-53

>ref|NP_770381.1| hypothetical protein blr3741 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49006.1| blr3741 [Bradyrhizobium japonicum USDA 110]
          Length = 145

 Score =  252 bits (644), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/142 (85%), Positives = 130/142 (91%), Gaps = 1/142 (0%)

Query: 2   GMSVGVLDHFNIRTRNLSATVRFYEDILGLEKGARPNFAFPGAWMYSEGKAVVHLVDISA 61
           G+SVGVLDHFNIRTRNL+ TVRFYED+LGLEKGARPNFAFPGAWMYSEGK VVHLVDIS 
Sbjct: 3   GVSVGVLDHFNIRTRNLAETVRFYEDVLGLEKGARPNFAFPGAWMYSEGKPVVHLVDISP 62

Query: 62  TDEAQKPDSGVVHHVAFASQGFDGMRQRLQSKGMEFDSRQVPGGDLWQIFVNDPNGVMIE 121
           T E QKPDSGVVHHVAF S+GFDGM+QRL SKGM+FDSRQVPGGDLWQIFV+DPNGVMIE
Sbjct: 63  TSEPQKPDSGVVHHVAFVSRGFDGMKQRLTSKGMKFDSRQVPGGDLWQIFVHDPNGVMIE 122

Query: 122 LNYEAAKEGGSAAPAERRDDVG 143
           LNYEAA E G AAPAE  DD+G
Sbjct: 123 LNYEAALEQG-AAPAEMADDIG 143


>ref|YP_001239463.1| hypothetical protein BBta_3464 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35557.1| hypothetical protein BBta_3464 [Bradyrhizobium sp. BTAi1]
          Length = 148

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 113/143 (79%), Positives = 124/143 (86%)

Query: 1   MGMSVGVLDHFNIRTRNLSATVRFYEDILGLEKGARPNFAFPGAWMYSEGKAVVHLVDIS 60
           MG+SVGVLDHFNIRTRNL+ TVRFYED+LGLE GARPNFAFPGAWMYSEG+AVVHLVDIS
Sbjct: 1   MGVSVGVLDHFNIRTRNLAETVRFYEDVLGLENGARPNFAFPGAWMYSEGRAVVHLVDIS 60

Query: 61  ATDEAQKPDSGVVHHVAFASQGFDGMRQRLQSKGMEFDSRQVPGGDLWQIFVNDPNGVMI 120
            T EAQKPDSGVVHHVAF S+GF  M+ RL +KGM F++RQVPGG+LWQIFV DPNGVMI
Sbjct: 61  PTSEAQKPDSGVVHHVAFVSRGFAAMKARLAAKGMPFEARQVPGGELWQIFVRDPNGVMI 120

Query: 121 ELNYEAAKEGGSAAPAERRDDVG 143
           ELNYEAAKE    AP E   D+G
Sbjct: 121 ELNYEAAKEQAGDAPVETASDIG 143


>ref|YP_001206681.1| putative dioxygenase [Bradyrhizobium sp. ORS 278]
 emb|CAL78464.1| conserved hypothetical protein; putative dioxygenase
           [Bradyrhizobium sp. ORS 278]
          Length = 148

 Score =  240 bits (613), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/144 (77%), Positives = 123/144 (85%)

Query: 1   MGMSVGVLDHFNIRTRNLSATVRFYEDILGLEKGARPNFAFPGAWMYSEGKAVVHLVDIS 60
           MG+SVGVLDHFNIRTRNL  TVRFYED+LGLE GARPNFAFPGAWMYSEG+ VVHLVDIS
Sbjct: 1   MGVSVGVLDHFNIRTRNLPETVRFYEDVLGLENGARPNFAFPGAWMYSEGRPVVHLVDIS 60

Query: 61  ATDEAQKPDSGVVHHVAFASQGFDGMRQRLQSKGMEFDSRQVPGGDLWQIFVNDPNGVMI 120
           AT+E QKPDSGVVHHVAF S+GF GM+ RL +K M F++RQVPGG+LWQIFV DPNGVMI
Sbjct: 61  ATEETQKPDSGVVHHVAFVSRGFAGMKARLAAKSMPFEARQVPGGELWQIFVRDPNGVMI 120

Query: 121 ELNYEAAKEGGSAAPAERRDDVGA 144
           ELNYEAAKE    AP E   D+G 
Sbjct: 121 ELNYEAAKEQAEDAPVENASDIGT 144


>ref|YP_317828.1| glyoxalase/bleomycin resistance protein/dioxygenase [Nitrobacter
           winogradskyi Nb-255]
 gb|ABA04476.1| glyoxalase/bleomycin resistance protein/dioxygenase [Nitrobacter
           winogradskyi Nb-255]
          Length = 129

 Score =  211 bits (537), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 95/129 (73%), Positives = 114/129 (88%)

Query: 3   MSVGVLDHFNIRTRNLSATVRFYEDILGLEKGARPNFAFPGAWMYSEGKAVVHLVDISAT 62
           MSVG+LDHFNIRTR L+ TVRFYE++LGL KG RP+FAFPGAW+YSEGK VVHLVDI+ T
Sbjct: 1   MSVGMLDHFNIRTRKLAETVRFYEEVLGLTKGDRPDFAFPGAWLYSEGKPVVHLVDIAPT 60

Query: 63  DEAQKPDSGVVHHVAFASQGFDGMRQRLQSKGMEFDSRQVPGGDLWQIFVNDPNGVMIEL 122
            E QKPDSGVVHH+AFAS+ + GM+QRL++KG  F +R+VPGG +WQIFV+DPNGV+IEL
Sbjct: 61  SEPQKPDSGVVHHIAFASRDYRGMKQRLEAKGFAFKAREVPGGHIWQIFVSDPNGVLIEL 120

Query: 123 NYEAAKEGG 131
           NY+AA EGG
Sbjct: 121 NYDAAAEGG 129


>ref|YP_576753.1| glyoxalase/bleomycin resistance protein/dioxygenase [Nitrobacter
           hamburgensis X14]
 gb|ABE62293.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Nitrobacter
           hamburgensis X14]
          Length = 129

 Score =  210 bits (535), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 110/129 (85%)

Query: 3   MSVGVLDHFNIRTRNLSATVRFYEDILGLEKGARPNFAFPGAWMYSEGKAVVHLVDISAT 62
           MSVG+LDHFNIRTR L+ TVRFYE+ILGL KG RP F FPGAW+YS+GK VVHLVDIS T
Sbjct: 1   MSVGMLDHFNIRTRKLAETVRFYEEILGLTKGDRPEFTFPGAWLYSDGKPVVHLVDISPT 60

Query: 63  DEAQKPDSGVVHHVAFASQGFDGMRQRLQSKGMEFDSRQVPGGDLWQIFVNDPNGVMIEL 122
            E QKPDSGV+HH+AFAS+ F GM+QRL+SKG  F +R+VPGG LWQIFV DPNGVMIEL
Sbjct: 61  SEPQKPDSGVIHHIAFASRDFSGMKQRLESKGFAFRAREVPGGALWQIFVCDPNGVMIEL 120

Query: 123 NYEAAKEGG 131
           NY+AA E G
Sbjct: 121 NYDAAAEQG 129