BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0058.0029.p (470 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766969.1| two-component hybrid sensor and regulator [Brad... 407 e-111 ref|YP_001203586.1| two-component hybrid sensor and regulator [B... 395 e-107 ref|YP_004612474.1| histidine kinase [Mesorhizobium opportunistu... 280 3e-73 ref|NP_102789.1| two-component sensor [Mesorhizobium loti MAFF30... 278 2e-72 ref|YP_004142633.1| ATPase domain-containing protein [Mesorhizob... 276 5e-72 >ref|NP_766969.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC45594.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum USDA 110] Length = 452 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 207/346 (59%), Positives = 257/346 (74%), Gaps = 1/346 (0%) Query: 118 KAARLTLSALTEMATGSKNVALTDQIDRSLATLEDMLRTLLDISKLDAGVLRPEFGPVAI 177 AARLTLSALTEM + L DQ DRSL LED+LR+LL+I+KLDAG L+P+ +A+ Sbjct: 107 NAARLTLSALTEMMESQEAGLLIDQADRSLLMLEDLLRSLLEIAKLDAGALKPDVRAIAL 166 Query: 178 ASLFEPLEQEFVATAAKRNLGFRIMPSSAVVRSDPLMLRRILQNLVANALRYTQRGSVLM 237 A LFE L EF AA++ L RI S VRSD +MLRRILQNL+ANA+RYT+ G V+M Sbjct: 167 APLFEQLRNEFEPVAARQGLSLRIRTSPRAVRSDAMMLRRILQNLLANAIRYTRNGGVVM 226 Query: 238 GCRARGDDICIEVHDTGPGIPEAQREAIFVEFQRGETSAGDKAGIGLGLSIVRRFADLLG 297 GCR RGD ICI+V DTGPGI +AQ++AIF EFQRGE +A D+AG GLGLSIVRRFA +LG Sbjct: 227 GCRLRGDHICIQVSDTGPGIAQAQQQAIFREFQRGEATATDQAGFGLGLSIVRRFATVLG 286 Query: 298 HDIRLSSRAGKGSVFSVTV-PRTLDPVAIPVREQASVDYRYGGMEGAKILLIENDLSSAE 356 H++RLSS+ G+GS F++ + P L V+ V E + RY G+EGAKILLIEND + +E Sbjct: 287 HEVRLSSQVGRGSTFTLELEPADLAEVSDEVHEVKLAERRYSGLEGAKILLIENDPNGSE 346 Query: 357 GLAHLLEKWGCDVAVTISKTEALERIHALDGIPDAIIADLHLDNGETGIQAVDVIRGAIN 416 +A LLE WGCDVA T S +AL R+ L G PDA+IADLHLD+GE+G+ A+ +R + Sbjct: 347 AMAALLEGWGCDVATTRSAADALLRLSELGGAPDAVIADLHLDHGESGLSAIADVRQHLK 406 Query: 417 AKVPAIIVTADYSAKAASDVSAFGHELLKKPIKPAEMRSLLSFLLA 462 PA+I+TADYS KAA D S G E+LKKPIKPAEMR+LLSFLL+ Sbjct: 407 LDTPAMIITADYSEKAAKDASRHGLEVLKKPIKPAEMRALLSFLLS 452 >ref|YP_001203586.1| two-component hybrid sensor and regulator [Bradyrhizobium sp. ORS 278] emb|CAL75349.1| Two-component hybrid sensor and regulator [Bradyrhizobium sp. ORS 278] Length = 449 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/349 (57%), Positives = 255/349 (73%), Gaps = 7/349 (2%) Query: 118 KAARLTLSALTEMATGSKNVALTDQIDRSLATLEDMLRTLLDISKLDAGVLRPEFGPVAI 177 AARLTLS L + + ++ Q+DRSL+ LED+LR+LLDI+KLDAG LRPE P+ + Sbjct: 102 NAARLTLSTLADEVQSERGASMLGQVDRSLSMLEDLLRSLLDIAKLDAGALRPEMRPILL 161 Query: 178 ASLFEPLEQEFVATAAKRNLGFRIMPSSAVVRSDPLMLRRILQNLVANALRYTQRGSVLM 237 ++LFEPLE+EF AAKR L RI P+S V SD +MLRRILQNL+ANALRYT+RG V+M Sbjct: 162 STLFEPLEREFAPIAAKRGLALRISPTSLAVESDAMMLRRILQNLLANALRYTRRGGVVM 221 Query: 238 GCRARGD---DICIEVHDTGPGIPEAQREAIFVEFQRGETSAGDKAGIGLGLSIVRRFAD 294 GCR RG + IEV DTGPGIP+ Q+EAIF+EFQRG+ S D+AG GLGLSIVRRFA Sbjct: 222 GCR-RGPGPGRVRIEVRDTGPGIPKPQQEAIFLEFQRGQPSTEDQAGFGLGLSIVRRFAK 280 Query: 295 LLGHDIRLSSRAGKGSVFSVTVPRTLDPVAIPVREQA--SVDYRYGGMEGAKILLIENDL 352 L H +RL+SR GS F++ + R +D A+P Q VD+ Y G+EG++ILLIEND Sbjct: 281 ALDHQVRLASRIDHGSTFTLELDR-VDAAAVPPEPQPVDQVDHEYSGLEGSRILLIENDA 339 Query: 353 SSAEGLAHLLEKWGCDVAVTISKTEALERIHALDGIPDAIIADLHLDNGETGIQAVDVIR 412 + AE + LLEKWGCDV T+S +AL+R+ L +P+ IIADLHLD E+G+ A+ IR Sbjct: 340 AGAEAMVSLLEKWGCDVVATVSLHDALQRLSTLGAVPETIIADLHLDGDESGLAAIRDIR 399 Query: 413 GAINAKVPAIIVTADYSAKAASDVSAFGHELLKKPIKPAEMRSLLSFLL 461 I + VPA+IVTADYS AA + S FG E+L KP++PAE+R+LLSFLL Sbjct: 400 QFIGSDVPAMIVTADYSEAAAKEASLFGLEILTKPVRPAELRALLSFLL 448 >ref|YP_004612474.1| histidine kinase [Mesorhizobium opportunistum WSM2075] gb|AEH88380.1| histidine kinase [Mesorhizobium opportunistum WSM2075] Length = 446 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 218/337 (64%), Gaps = 4/337 (1%) Query: 118 KAARLTLSALTEMATGSKNVALTDQIDRSLATLEDMLRTLLDISKLDAGVLRPEFGPVAI 177 AA L++SAL E+ T + L Q++RSL T+ED+LRTLLDISKLDAGV++P+ G V++ Sbjct: 98 NAAHLSVSALAEVQTSDEGRKLVRQVERSLETMEDLLRTLLDISKLDAGVVQPDIGDVSL 157 Query: 178 ASLFEPLEQEFVATAAKRNLGFRIMPSSAVVRSDPLMLRRILQNLVANALRYTQRGSVLM 237 +LF L +F AA + L + P +AVVRSD +LRRILQN+++NAL YT+ G VL+ Sbjct: 158 EALFSSLRSDFQPVAALKQLSLKFRPVNAVVRSDRTLLRRILQNILSNALGYTRSGGVLV 217 Query: 238 GCRARGDDICIEVHDTGPGIPEAQREAIFVEFQRGETSAG---DKAGIGLGLSIVRRFAD 294 G R RGD I I+V DTG GIPE QREA+F EF RG A + G+GLGL+IVRR A Sbjct: 218 GTRHRGDTIRIDVADTGCGIPEDQREAVFEEFHRGTLPANAELNGGGLGLGLAIVRRMAG 277 Query: 295 LLGHDIRLSSRAGKGSVFSVTVPRTLDPVAIPVREQASVDYRYG-GMEGAKILLIENDLS 353 LGH + SS+ G+G++F + VP + A + AS++ G G+ G K+LL+END+ Sbjct: 278 ALGHPVTFSSKVGRGTIFHIDVPVGIGAPADAIASAASLERPRGYGLFGTKVLLVENDIE 337 Query: 354 SAEGLAHLLEKWGCDVAVTISKTEALERIHALDGIPDAIIADLHLDNGETGIQAVDVIRG 413 E + LLE+W C V S +AL+ + D +PD +IAD HLD G+ G + +R Sbjct: 338 VLEAMTFLLERWQCLVRAATSTDDALDMLGDTDWVPDIVIADQHLDGGDLGTATISEVRN 397 Query: 414 AINAKVPAIIVTADYSAKAASDVSAFGHELLKKPIKP 450 + VPA+IVTAD S + A A G EL++KP+KP Sbjct: 398 YLGRAVPALIVTADSSEEIAKAARAGGIELMRKPLKP 434 >ref|NP_102789.1| two-component sensor [Mesorhizobium loti MAFF303099] dbj|BAB48575.1| probable two-component sensor [Mesorhizobium loti MAFF303099] Length = 446 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 213/337 (63%), Gaps = 4/337 (1%) Query: 118 KAARLTLSALTEMATGSKNVALTDQIDRSLATLEDMLRTLLDISKLDAGVLRPEFGPVAI 177 AA L++SAL E+ T + L Q++RSL T+ED+LRTLLDISKLDAGV+ P+ G V++ Sbjct: 98 NAAHLSVSALAELQTSDEGRKLVRQVERSLETMEDLLRTLLDISKLDAGVVHPDIGDVSL 157 Query: 178 ASLFEPLEQEFVATAAKRNLGFRIMPSSAVVRSDPLMLRRILQNLVANALRYTQRGSVLM 237 +LF L +F A + L + P +AVVRSD +LRRILQN+++NAL YT+ G VL+ Sbjct: 158 EALFSSLRSDFQPVAEMKRLSLKFRPVNAVVRSDRTLLRRILQNILSNALGYTRSGGVLV 217 Query: 238 GCRARGDDICIEVHDTGPGIPEAQREAIFVEFQRGETSAG---DKAGIGLGLSIVRRFAD 294 G R RGD I I+V DTG GIPE QREA+F EF RG A D G+GLGL+IVRR A Sbjct: 218 GTRHRGDTIRIDVADTGCGIPEDQREAVFEEFHRGTLPANAGLDGGGLGLGLAIVRRMAG 277 Query: 295 LLGHDIRLSSRAGKGSVFSVTVPRTLDPVAIPVREQASVDYRYG-GMEGAKILLIENDLS 353 LGH + SS+ G+G++F + VP + A + S++ G G+ G K+LL+END Sbjct: 278 ALGHPVTFSSKVGRGTIFHIDVPVGIGAPADAIASATSLERSRGYGLFGTKVLLVENDAE 337 Query: 354 SAEGLAHLLEKWGCDVAVTISKTEALERIHALDGIPDAIIADLHLDNGETGIQAVDVIRG 413 E + LLE+W C V S +AL+ + D +PD IIAD HLD G+ G + +R Sbjct: 338 VLEAMTFLLERWQCLVRAATSTDDALDLLGDTDWVPDIIIADQHLDGGDLGTTTISEVRD 397 Query: 414 AINAKVPAIIVTADYSAKAASDVSAFGHELLKKPIKP 450 + VPA+IVTAD S A A G EL++KP+KP Sbjct: 398 YLGRAVPALIVTADSSEAVAKAARAGGIELMRKPLKP 434 >ref|YP_004142633.1| ATPase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV12583.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 446 Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 154/337 (45%), Positives = 215/337 (63%), Gaps = 4/337 (1%) Query: 118 KAARLTLSALTEMATGSKNVALTDQIDRSLATLEDMLRTLLDISKLDAGVLRPEFGPVAI 177 AA L++SAL E+ T + L Q++RSL T+ED+LRTLLDISKLDAGV++P+ V++ Sbjct: 98 NAAHLSVSALAEVQTSDEGKKLVRQVERSLETMEDLLRTLLDISKLDAGVVQPDISDVSL 157 Query: 178 ASLFEPLEQEFVATAAKRNLGFRIMPSSAVVRSDPLMLRRILQNLVANALRYTQRGSVLM 237 +LF L +F+ A + L + P AVVRSD +LRRILQN+++NAL YT+ G VL+ Sbjct: 158 EALFSSLRSDFLPVAEMKGLSLKFRPVHAVVRSDRTLLRRILQNILSNALGYTRSGGVLV 217 Query: 238 GCRARGDDICIEVHDTGPGIPEAQREAIFVEFQRGETSAG---DKAGIGLGLSIVRRFAD 294 G R RGD I I+V DTG GIP+ QREA+F EF RG + A D G+GLGL+IVRR A Sbjct: 218 GTRHRGDTIRIDVADTGCGIPDDQREAVFEEFHRGTSPANAELDGGGLGLGLAIVRRMAS 277 Query: 295 LLGHDIRLSSRAGKGSVFSVTVPRTLDPVAIPVREQASVDYRYG-GMEGAKILLIENDLS 353 LGH + SS+ G+G++F + VP + A + A ++ G G+ G K+LL+END+ Sbjct: 278 ALGHPVTFSSKVGRGTIFHIDVPVGIGAPADAIASVADMERPRGYGLFGTKVLLVENDIE 337 Query: 354 SAEGLAHLLEKWGCDVAVTISKTEALERIHALDGIPDAIIADLHLDNGETGIQAVDVIRG 413 + + LLE+W C V S +AL+ + D +PD +IAD HLD G+ G + +R Sbjct: 338 VLQAMTFLLERWQCLVRAATSTDDALDMLGDTDWVPDIVIADQHLDGGDLGTTTIAEVRD 397 Query: 414 AINAKVPAIIVTADYSAKAASDVSAFGHELLKKPIKP 450 + VPA+IVTAD S A + G EL++KP+KP Sbjct: 398 YLGRAVPALIVTADSSEAVAKAARSGGIELMRKPLKP 434