BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0058.0027.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203588.1| two-component LuxR family transcriptional re... 288 3e-76 ref|NP_766971.1| two-component response regulator [Bradyrhizobiu... 273 1e-71 ref|YP_004612471.1| two component LuxR family transcriptional re... 201 1e-49 ref|NP_102790.1| two-component response regulator [Mesorhizobium... 199 3e-49 ref|YP_004142627.1| response regulator receiver [Mesorhizobium c... 195 5e-48 >ref|YP_001203588.1| two-component LuxR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL75351.1| putative two-component transcriptional regulator, LuxR family [Bradyrhizobium sp. ORS 278] Length = 253 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 140/211 (66%), Positives = 175/211 (82%) Query: 3 FLIIDDHPLFGEALGNAIRISHPDARIYEATSIKGALGILASEPNIDLALLDLLLPDVVG 62 FLIIDDHPLF EALGNA+R++HPDA+I++A SI AL ILA++ IDLALLDL LPD G Sbjct: 28 FLIIDDHPLFREALGNAVRLAHPDAQIFDALSIADALNILAAQSEIDLALLDLTLPDATG 87 Query: 63 FSGFQKIRDRYPRLPIAIVSSEEDKHTIREALEMGAVGYLPKSTSLGELSQAIARVLSGS 122 FSGF ++R +PRLP+AIVSSEED+H +REAL +GA GYLPKSTS EL+ AI RVLSGS Sbjct: 88 FSGFLRLRAAHPRLPVAIVSSEEDQHVVREALALGAAGYLPKSTSKRELTAAIERVLSGS 147 Query: 123 VSAPRDFVAVGALEQSETARTLRERIQKLTPQQIRVLHLIIRGLQNREIAAELKLAESTV 182 +S P+D + + + ++R L++R+ +LTPQQ+RVL LI RG QNR+IAAEL+LAESTV Sbjct: 148 ISVPKDLLPAADRDGNGSSRALQDRVAQLTPQQLRVLDLIRRGYQNRDIAAELQLAESTV 207 Query: 183 KAHVTEILRKLKLFSRNKAIIELGKIPLPVP 213 KAH+TE+LRKL+LFSRNKA+IE GKI LP+P Sbjct: 208 KAHITEVLRKLRLFSRNKAVIETGKIELPLP 238 >ref|NP_766971.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC45596.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 227 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 140/222 (63%), Positives = 177/222 (79%), Gaps = 1/222 (0%) Query: 3 FLIIDDHPLFGEALGNAIRISHPDARIYEATSIKGALGILASEPNIDLALLDLLLPDVVG 62 FLIIDDHPLF EALGNA+R++ P+ARI+EA SI AL IL++ IDLALLDL LPD G Sbjct: 4 FLIIDDHPLFREALGNAVRLALPEARIFEAMSIGDALHILSAGEGIDLALLDLSLPDATG 63 Query: 63 FSGFQKIRDRYPRLPIAIVSSEEDKHTIREALEMGAVGYLPKSTSLGELSQAIARVLSGS 122 FSGF ++R+ YPRLP+AIVSSEED+H +REAL +GA GYLPKSTS EL+Q+I VLSGS Sbjct: 64 FSGFLRLREAYPRLPVAIVSSEEDQHVVREALALGAAGYLPKSTSKRELAQSIEGVLSGS 123 Query: 123 VSAPRDFVAVGALEQSETARTLRERIQKLTPQQIRVLHLIIRGLQNREIAAELKLAESTV 182 VS P+DFVA +++ ++ L ++++LTPQQ+RVL L+ RG NR+IA EL+LAESTV Sbjct: 124 VSVPKDFVAT-PRRRADASKALEVKLRELTPQQLRVLDLLRRGYPNRQIAQELQLAESTV 182 Query: 183 KAHVTEILRKLKLFSRNKAIIELGKIPLPVPEACSGAKAEKA 224 KAH+TEILRKL LFSRNKAIIE+GK+ LP P + A+ ++ Sbjct: 183 KAHITEILRKLGLFSRNKAIIEIGKMELPDPRSRPHARVDRG 224 >ref|YP_004612471.1| two component LuxR family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH88377.1| two component transcriptional regulator, LuxR family [Mesorhizobium opportunistum WSM2075] Length = 227 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/206 (49%), Positives = 142/206 (68%) Query: 3 FLIIDDHPLFGEALGNAIRISHPDARIYEATSIKGALGILASEPNIDLALLDLLLPDVVG 62 FLIIDDHPLF EAL +A+++++P+ EA SI AL +LA DLALLDL +PDV G Sbjct: 10 FLIIDDHPLFREALHSAVQMAYPEVDTVEARSITEALDLLADAKPFDLALLDLSMPDVHG 69 Query: 63 FSGFQKIRDRYPRLPIAIVSSEEDKHTIREALEMGAVGYLPKSTSLGELSQAIARVLSGS 122 F G ++R RYPRLP+ IVS E+ I EAL GA G++PKS +L+ AI V+ G+ Sbjct: 70 FDGLLQLRTRYPRLPVVIVSGYEEPRIISEALSYGAAGFIPKSARKSDLAAAIRSVMDGA 129 Query: 123 VSAPRDFVAVGALEQSETARTLRERIQKLTPQQIRVLHLIIRGLQNREIAAELKLAESTV 182 + P+ + A S + +R+ KLTPQQ+RVL ++ +GL N++IA EL++ E+TV Sbjct: 130 IYVPQTYEGQPADADSSDRADMVQRLSKLTPQQLRVLQMLRQGLLNKQIAYELQVGETTV 189 Query: 183 KAHVTEILRKLKLFSRNKAIIELGKI 208 KAHV+EILRKL ++SR +A+IE+ K+ Sbjct: 190 KAHVSEILRKLNVYSRTQAVIEVSKL 215 >ref|NP_102790.1| two-component response regulator [Mesorhizobium loti MAFF303099] dbj|BAB48576.1| probable two-component response regulator [Mesorhizobium loti MAFF303099] Length = 227 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 101/206 (49%), Positives = 141/206 (68%) Query: 3 FLIIDDHPLFGEALGNAIRISHPDARIYEATSIKGALGILASEPNIDLALLDLLLPDVVG 62 FLIIDDHPLF EAL +A+++++P+ EA SI AL +LA DLALLDL +PDV G Sbjct: 10 FLIIDDHPLFREALHSAVQMAYPEVDTVEARSIAEALDLLADAKPFDLALLDLSMPDVHG 69 Query: 63 FSGFQKIRDRYPRLPIAIVSSEEDKHTIREALEMGAVGYLPKSTSLGELSQAIARVLSGS 122 F G ++R RYPRLP+ IVS E+ I EAL GA G++PKS +L+ AI V+ G+ Sbjct: 70 FDGLLQLRTRYPRLPVVIVSGHEEPRIISEALSYGAAGFIPKSARKSDLAAAIRSVMDGA 129 Query: 123 VSAPRDFVAVGALEQSETARTLRERIQKLTPQQIRVLHLIIRGLQNREIAAELKLAESTV 182 + P + A S + +R+ KLTPQQ+RVL ++ +GL N++IA EL++ E+TV Sbjct: 130 IYVPETYEGQPADADSIDRADMVQRLSKLTPQQLRVLQMLRQGLLNKQIAYELQVGETTV 189 Query: 183 KAHVTEILRKLKLFSRNKAIIELGKI 208 KAHV+EILRKL ++SR +A+IE+ K+ Sbjct: 190 KAHVSEILRKLNVYSRTQAVIEVSKL 215 >ref|YP_004142627.1| response regulator receiver [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV12577.1| response regulator receiver [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 230 Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 99/206 (48%), Positives = 139/206 (67%) Query: 3 FLIIDDHPLFGEALGNAIRISHPDARIYEATSIKGALGILASEPNIDLALLDLLLPDVVG 62 FLIIDDHPLF EAL +A+++++P+ EA SI AL +LA DLALLDL +PDV G Sbjct: 13 FLIIDDHPLFREALHSAVQMAYPEVDTVEARSITEALDLLADAKPFDLALLDLSMPDVHG 72 Query: 63 FSGFQKIRDRYPRLPIAIVSSEEDKHTIREALEMGAVGYLPKSTSLGELSQAIARVLSGS 122 F G ++R RYPRLP+ IVS E+ I EAL GA G++PKS +L+ AI V+ G+ Sbjct: 73 FDGLLQLRTRYPRLPVVIVSGYEEPKIISEALSYGAAGFIPKSARKSDLAAAIRSVMEGA 132 Query: 123 VSAPRDFVAVGALEQSETARTLRERIQKLTPQQIRVLHLIIRGLQNREIAAELKLAESTV 182 + P + S + +R+ LTPQQ+RVL ++ +GL N++IA EL++ E+TV Sbjct: 133 IYVPETYEGRPPDADSADRADMVQRLSTLTPQQLRVLQMLRQGLLNKQIAYELQVGETTV 192 Query: 183 KAHVTEILRKLKLFSRNKAIIELGKI 208 KAHV+EILRKL ++SR +A+IE+ K+ Sbjct: 193 KAHVSEILRKLNVYSRTQAVIEVSKL 218