BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0058.0019.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766977.1| carbon monoxide dehydrogenase medium chain [Bra... 452 e-125 ref|YP_001208761.1| putative carbon monoxide dehydrogenase mediu... 420 e-115 ref|YP_001236756.1| putative carbon monoxide dehydrogenase mediu... 415 e-114 ref|YP_576737.1| carbon-monoxide dehydrogenase [Nitrobacter hamb... 407 e-112 ref|YP_001994112.1| carbon-monoxide dehydrogenase (acceptor) [Rh... 400 e-109 >ref|NP_766977.1| carbon monoxide dehydrogenase medium chain [Bradyrhizobium japonicum USDA 110] dbj|BAC45602.1| blr0337 [Bradyrhizobium japonicum USDA 110] Length = 266 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/266 (83%), Positives = 246/266 (92%) Query: 1 MYETNYHRASSVADAAATFAKGAESKFLAGGQTLLPVMKQRLAAPSDVIDLSKVQEMIGI 60 MY+T YHRASSV +AA+ F K +E+KFL+GGQTLLPVMKQRLA+PSDVIDL K+++MIGI Sbjct: 1 MYQTTYHRASSVDEAASLFGKSSEAKFLSGGQTLLPVMKQRLASPSDVIDLGKIKDMIGI 60 Query: 61 EVSGDTVTIKAATPHYDVAQSDAVKKAIPALANLASEIGDPAVRYRGTIGGSLANNDPAA 120 E +GDT+TIKAATPHYDVA SDA KKAIPALA LAS IGDPAVRYRGTIGGSLANNDPAA Sbjct: 61 EAAGDTLTIKAATPHYDVATSDAAKKAIPALAYLASLIGDPAVRYRGTIGGSLANNDPAA 120 Query: 121 DYPAAVLALGATVKTNKRSIAAEDFFKGLFSTALEDGEIITAVSFPVPAKSGYAKFPNPA 180 DYPAA LALGATVKTNKRSI+AEDFFKGLF+TALEDGEIITAVSFPVP K+GYAKFP+PA Sbjct: 121 DYPAATLALGATVKTNKRSISAEDFFKGLFTTALEDGEIITAVSFPVPGKAGYAKFPHPA 180 Query: 181 SRFALTGVFVAKTKSGDVRVAATGASQSGVMRVAPIEQALKANWAASALDSVTIPASGLL 240 SRFALTGVFVA+TKSGDVRVAATGASQSGV+R+ IE ALKANW+ SA+DSVTI ASGLL Sbjct: 181 SRFALTGVFVAQTKSGDVRVAATGASQSGVVRIPAIEAALKANWSPSAIDSVTISASGLL 240 Query: 241 ADIHGSADYRANLIKVMGQRAVTAAG 266 +DIHG+++YRANLIKVM QRAV AAG Sbjct: 241 SDIHGTSEYRANLIKVMAQRAVAAAG 266 >ref|YP_001208761.1| putative carbon monoxide dehydrogenase medium subunit, coxM-like protein [Bradyrhizobium sp. ORS 278] emb|CAL80546.1| Putative carbon monoxide dehydrogenase medium subunit, coxM-like protein [Bradyrhizobium sp. ORS 278] Length = 266 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/266 (75%), Positives = 240/266 (90%) Query: 1 MYETNYHRASSVADAAATFAKGAESKFLAGGQTLLPVMKQRLAAPSDVIDLSKVQEMIGI 60 MYET YHRASSV +AAA F+KG+E+KFLAGG TL+PVMKQRLA+PSDVID+ K++++IG+ Sbjct: 1 MYETTYHRASSVDEAAALFSKGSEAKFLAGGHTLIPVMKQRLASPSDVIDIGKIKDLIGV 60 Query: 61 EVSGDTVTIKAATPHYDVAQSDAVKKAIPALANLASEIGDPAVRYRGTIGGSLANNDPAA 120 +++GDT+ IKAAT +YD+ + VKKAIPA+A+L S +GDPAVR RGTIGGS+ANNDPAA Sbjct: 61 QLAGDTLVIKAATTYYDIMTNADVKKAIPAIAHLTSVLGDPAVRARGTIGGSIANNDPAA 120 Query: 121 DYPAAVLALGATVKTNKRSIAAEDFFKGLFSTALEDGEIITAVSFPVPAKSGYAKFPNPA 180 D+PAA+++LGATVKTNKRSI+A+DFFKGLF+TALEDGEIIT VSFPVP K+GYAK +PA Sbjct: 121 DFPAALVSLGATVKTNKRSISADDFFKGLFTTALEDGEIITEVSFPVPEKAGYAKMRHPA 180 Query: 181 SRFALTGVFVAKTKSGDVRVAATGASQSGVMRVAPIEQALKANWAASALDSVTIPASGLL 240 SRFALTGVFV KTK GDVRVAATGASQSGVMRV+ IE AL+ANW+ASA+D VT+ ASGLL Sbjct: 181 SRFALTGVFVTKTKGGDVRVAATGASQSGVMRVSAIEAALQANWSASAIDGVTVSASGLL 240 Query: 241 ADIHGSADYRANLIKVMGQRAVTAAG 266 +DIHGSADYRANL+KVM QRAV AAG Sbjct: 241 SDIHGSADYRANLVKVMAQRAVQAAG 266 >ref|YP_001236756.1| putative carbon monoxide dehydrogenase medium subunit, coxM-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ32850.1| Putative carbon monoxide dehydrogenase medium subunit, coxM-like protein [Bradyrhizobium sp. BTAi1] Length = 266 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/266 (74%), Positives = 238/266 (89%) Query: 1 MYETNYHRASSVADAAATFAKGAESKFLAGGQTLLPVMKQRLAAPSDVIDLSKVQEMIGI 60 MY+T YHRASSV +AAA FAKG+E+KFLAGG TLLPVMKQRLA+PSDVID+ K++++IG+ Sbjct: 1 MYQTTYHRASSVDEAAALFAKGSEAKFLAGGHTLLPVMKQRLASPSDVIDIGKIKDLIGV 60 Query: 61 EVSGDTVTIKAATPHYDVAQSDAVKKAIPALANLASEIGDPAVRYRGTIGGSLANNDPAA 120 ++SGDT+ IKAAT +YD+ + V+KAIPA++ L S +GDPAVR+RGTIGGS+ANNDPAA Sbjct: 61 QLSGDTLVIKAATTYYDIMTNADVQKAIPAISYLTSVLGDPAVRHRGTIGGSIANNDPAA 120 Query: 121 DYPAAVLALGATVKTNKRSIAAEDFFKGLFSTALEDGEIITAVSFPVPAKSGYAKFPNPA 180 D+PAA+++LGATVKTNKR+I A+DFFKGLF+TALEDGEIIT V+FPVP K+GYAK +PA Sbjct: 121 DFPAALISLGATVKTNKRAITADDFFKGLFTTALEDGEIITEVAFPVPEKAGYAKMRHPA 180 Query: 181 SRFALTGVFVAKTKSGDVRVAATGASQSGVMRVAPIEQALKANWAASALDSVTIPASGLL 240 SRFALTGVFV KTK GDVRVAATGASQSGVMRV IE ALK+NW+ASA+D VT+ ASGLL Sbjct: 181 SRFALTGVFVTKTKGGDVRVAATGASQSGVMRVPAIEAALKSNWSASAIDGVTVSASGLL 240 Query: 241 ADIHGSADYRANLIKVMGQRAVTAAG 266 +DIHGS+DYRANL+KVM QRAV AAG Sbjct: 241 SDIHGSSDYRANLVKVMAQRAVQAAG 266 >ref|YP_576737.1| carbon-monoxide dehydrogenase [Nitrobacter hamburgensis X14] gb|ABE62277.1| Carbon-monoxide dehydrogenase [Nitrobacter hamburgensis X14] Length = 266 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/266 (72%), Positives = 236/266 (88%) Query: 1 MYETNYHRASSVADAAATFAKGAESKFLAGGQTLLPVMKQRLAAPSDVIDLSKVQEMIGI 60 MY+T YHR +S+ +A + FAKG+++ +LAGG TLLPVMKQRLAAPSDVIDL++++E++GI Sbjct: 1 MYQTTYHRPASIDEAVSLFAKGSDATYLAGGHTLLPVMKQRLAAPSDVIDLARIKELVGI 60 Query: 61 EVSGDTVTIKAATPHYDVAQSDAVKKAIPALANLASEIGDPAVRYRGTIGGSLANNDPAA 120 EVSGDT+TI+AAT +YD + VKKAIPAL +L S +GDPAVRYRGTIGGS+ANNDPAA Sbjct: 61 EVSGDTLTIRAATTYYDTMTNADVKKAIPALVHLTSMLGDPAVRYRGTIGGSIANNDPAA 120 Query: 121 DYPAAVLALGATVKTNKRSIAAEDFFKGLFSTALEDGEIITAVSFPVPAKSGYAKFPNPA 180 DYPAAVLAL ATVKTNKRSI A+DFFKGLF+TAL+DGEIIT V+FP+PAK+GYAK +PA Sbjct: 121 DYPAAVLALDATVKTNKRSIEADDFFKGLFTTALQDGEIITQVAFPIPAKAGYAKMRHPA 180 Query: 181 SRFALTGVFVAKTKSGDVRVAATGASQSGVMRVAPIEQALKANWAASALDSVTIPASGLL 240 SRFALTGVFVAKT++GDVRVAATGASQ+GVMRV IE AL+A+W+ASALD++ IP +G++ Sbjct: 181 SRFALTGVFVAKTRAGDVRVAATGASQNGVMRVGAIEAALEADWSASALDAIRIPDAGMI 240 Query: 241 ADIHGSADYRANLIKVMGQRAVTAAG 266 ADIHGSA YRANL++VM QRAV AG Sbjct: 241 ADIHGSAAYRANLVRVMAQRAVQQAG 266 >ref|YP_001994112.1| carbon-monoxide dehydrogenase (acceptor) [Rhodopseudomonas palustris TIE-1] gb|ACF03637.1| Carbon-monoxide dehydrogenase (acceptor) [Rhodopseudomonas palustris TIE-1] Length = 266 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/266 (72%), Positives = 225/266 (84%) Query: 1 MYETNYHRASSVADAAATFAKGAESKFLAGGQTLLPVMKQRLAAPSDVIDLSKVQEMIGI 60 MY TNYHRASSV +A A AKG+++K LAGG TLLPVMKQRLAAP D++D++K+ +IGI Sbjct: 1 MYSTNYHRASSVDEAVALIAKGSDAKLLAGGHTLLPVMKQRLAAPGDLVDIAKIPALIGI 60 Query: 61 EVSGDTVTIKAATPHYDVAQSDAVKKAIPALANLASEIGDPAVRYRGTIGGSLANNDPAA 120 E SGDT+TIKAAT +YD+ + VK+ IPA+A+L S +GDPAVRYRGTIGGS+A NDPAA Sbjct: 61 EASGDTLTIKAATTYYDIMHNADVKRLIPAIAHLTSVLGDPAVRYRGTIGGSVATNDPAA 120 Query: 121 DYPAAVLALGATVKTNKRSIAAEDFFKGLFSTALEDGEIITAVSFPVPAKSGYAKFPNPA 180 DYPAA+LAL ATVKTNKR I A+ FFKGLF TALED EIITA+SFPVP K+GYAK NPA Sbjct: 121 DYPAAILALNATVKTNKREIPADQFFKGLFMTALEDNEIITAISFPVPEKAGYAKMRNPA 180 Query: 181 SRFALTGVFVAKTKSGDVRVAATGASQSGVMRVAPIEQALKANWAASALDSVTIPASGLL 240 SRFALTGVFVAK KSG++R AATGASQ GVMRVA IEQAL+ANW+ASALD V + GL+ Sbjct: 181 SRFALTGVFVAKLKSGEIRAAATGASQDGVMRVAVIEQALQANWSASALDGVKVSDEGLI 240 Query: 241 ADIHGSADYRANLIKVMGQRAVTAAG 266 DIHG++DYRANLIKVM QRAV AAG Sbjct: 241 EDIHGTSDYRANLIKVMAQRAVQAAG 266