BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0058.0008.p (170 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236746.1| MarR family transcriptional regulator [Brady... 254 2e-66 ref|YP_001208771.1| MarR family transcriptional regulator [Brady... 251 2e-65 ref|NP_766987.1| transcriptional regulator [Bradyrhizobium japon... 233 7e-60 ref|YP_484524.1| MarR family transcriptional regulator [Rhodopse... 233 9e-60 ref|ZP_08629040.1| transcriptional regulator, MarR family [Brady... 233 1e-59 >ref|YP_001236746.1| MarR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ32840.1| putative transcriptional regulator, MarR family [Bradyrhizobium sp. BTAi1] Length = 185 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/171 (73%), Positives = 151/171 (88%), Gaps = 2/171 (1%) Query: 1 VEADERDNAAP-TKKRLDLFHFMPFRLNRVAAEVSSALSSEYQTRYGLDIPEWRVLATLG 59 VEA R+ AAP ++RLDLF F PFRLNR+AAEVS+AL+SEY+ RYGLDIPEWRVLATLG Sbjct: 16 VEAS-RNAAAPHAEERLDLFKFAPFRLNRLAAEVSAALASEYRERYGLDIPEWRVLATLG 74 Query: 60 FRSDPCSAQYIAHCTRTHKSTISRAVSALMEREIVERVENADDRREFRLRLTKAGQALYE 119 FR + CSAQY+A CTRTHKSTISRAV+AL+ER ++ERVENA+DRREFRLRLT+ G+ LYE Sbjct: 75 FRREACSAQYVAECTRTHKSTISRAVTALLERRLIERVENAEDRREFRLRLTRKGKTLYE 134 Query: 120 ELIPRLLRKEQEILSCLSAQERRDLGRLLGKVESSLELVQTSEEADAKDAY 170 ELIPRL ++E+EI++CLSA ERR RL+GK+E+SL+L+QTSEEADAK AY Sbjct: 135 ELIPRLQQREREIMACLSADERRAFDRLIGKIEASLDLIQTSEEADAKQAY 185 >ref|YP_001208771.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL80556.1| putative transcriptional regulator, MarR family [Bradyrhizobium sp. ORS 278] Length = 185 Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 121/167 (72%), Positives = 147/167 (88%), Gaps = 1/167 (0%) Query: 5 ERDNAAPTK-KRLDLFHFMPFRLNRVAAEVSSALSSEYQTRYGLDIPEWRVLATLGFRSD 63 ER A P +RLDLF F PFRLNR+AAEVS+AL+S+Y+ RYGLDIPEWRVLATLGFR D Sbjct: 19 ERHAALPQGDERLDLFKFAPFRLNRLAAEVSAALASDYRERYGLDIPEWRVLATLGFRRD 78 Query: 64 PCSAQYIAHCTRTHKSTISRAVSALMEREIVERVENADDRREFRLRLTKAGQALYEELIP 123 CSAQY+A CTRTHKSTISRAV++L+ER ++ERVENADDRREFRLRLT+ G+ LYEELIP Sbjct: 79 ACSAQYVAACTRTHKSTISRAVTSLLERRLIERVENADDRREFRLRLTRKGKTLYEELIP 138 Query: 124 RLLRKEQEILSCLSAQERRDLGRLLGKVESSLELVQTSEEADAKDAY 170 RL ++E+EI++CLSA+ER+ RL+GK+E+SL+L+QTSEEADAK AY Sbjct: 139 RLQQREREIMACLSAEERKLFDRLIGKIEASLDLIQTSEEADAKQAY 185 >ref|NP_766987.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC45612.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 149 Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 111/149 (74%), Positives = 130/149 (87%) Query: 22 MPFRLNRVAAEVSSALSSEYQTRYGLDIPEWRVLATLGFRSDPCSAQYIAHCTRTHKSTI 81 MPFRLNR+AAEVSSAL+ EYQ R+GLDIP WRV+ATLGFR+D CSAQYI+ CTRTHKSTI Sbjct: 1 MPFRLNRLAAEVSSALAVEYQERHGLDIPAWRVIATLGFRNDACSAQYISQCTRTHKSTI 60 Query: 82 SRAVSALMEREIVERVENADDRREFRLRLTKAGQALYEELIPRLLRKEQEILSCLSAQER 141 SRAV+ L+ ++ERVEN DRREFRL+LTK G+ALYEEL P+LLR+E EIL+CLSAQER Sbjct: 61 SRAVTMLLHEGLIERVENEADRREFRLQLTKKGRALYEELFPQLLRREDEILACLSAQER 120 Query: 142 RDLGRLLGKVESSLELVQTSEEADAKDAY 170 + L LLGK+E SL+L+QTSEEADAK AY Sbjct: 121 KQLSALLGKIEQSLDLIQTSEEADAKQAY 149 >ref|YP_484524.1| MarR family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD05613.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris HaA2] Length = 165 Score = 233 bits (593), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 109/151 (72%), Positives = 130/151 (86%) Query: 15 RLDLFHFMPFRLNRVAAEVSSALSSEYQTRYGLDIPEWRVLATLGFRSDPCSAQYIAHCT 74 +LDLF F+PF+LNR+AAEVS+AL+ EYQ RYGLDIP WR+LATLGFR D C+AQ+I+ CT Sbjct: 3 KLDLFSFVPFQLNRLAAEVSAALAGEYQQRYGLDIPGWRILATLGFRDDACTAQFISQCT 62 Query: 75 RTHKSTISRAVSALMEREIVERVENADDRREFRLRLTKAGQALYEELIPRLLRKEQEILS 134 RTHKSTISRAV+AL+ERE++ERVEN DDRREFRLRLT G+ALY EL+PRL RKEQEILS Sbjct: 63 RTHKSTISRAVTALLERELIERVENEDDRREFRLRLTAKGRALYHELVPRLKRKEQEILS 122 Query: 135 CLSAQERRDLGRLLGKVESSLELVQTSEEAD 165 CLSA+ER DL LGK+E L+L+Q S + D Sbjct: 123 CLSARERTDLAAALGKIERHLDLIQASHDQD 153 >ref|ZP_08629040.1| transcriptional regulator, MarR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08399.1| transcriptional regulator, MarR family [Bradyrhizobiaceae bacterium SG-6C] Length = 178 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 110/157 (70%), Positives = 138/157 (87%), Gaps = 1/157 (0%) Query: 15 RLDLFHFMPFRLNRVAAEVSSALSSEYQTRYGLDIPEWRVLATLGFRSDPCSAQYIAHCT 74 +LDLF F+PFRLNR+AAEVS+ LSSEY+ RYGLDIPEWRV+ATLGFR + C+AQYIA+CT Sbjct: 22 KLDLFSFVPFRLNRLAAEVSAELSSEYRDRYGLDIPEWRVMATLGFRDEACTAQYIAYCT 81 Query: 75 RTHKSTISRAVSALMEREIVERVENADDRREFRLRLTKAGQALYEELIPRLLRKEQEILS 134 RTHKSTISRAV+ L+E++++ERVENADDRRE L+LT+ G ALYEELIP+LLRKEQ+ILS Sbjct: 82 RTHKSTISRAVAHLLEQQLIERVENADDRRELALQLTRKGHALYEELIPQLLRKEQDILS 141 Query: 135 CLSAQERRDLGRLLGKVESSLELVQTSEEADA-KDAY 170 CL+A ER++ LGK+E L+LVQ++++A A KDAY Sbjct: 142 CLTAAERKEFAATLGKIERKLDLVQSAKDARAKKDAY 178