BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0058.0002.p (190 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766995.1| hypothetical protein blr0355 [Bradyrhizobium ja... 307 5e-82 ref|YP_578799.1| secretion protein HlyD [Nitrobacter hamburgensi... 300 5e-80 ref|YP_001208777.1| HlyD family secretion protein [Bradyrhizobiu... 299 1e-79 ref|ZP_01047765.1| Secretion protein HlyD [Nitrobacter sp. Nb-31... 298 2e-79 ref|YP_001236740.1| HlyD family secretion protein [Bradyrhizobiu... 297 7e-79 >ref|NP_766995.1| hypothetical protein blr0355 [Bradyrhizobium japonicum USDA 110] dbj|BAC45620.1| blr0355 [Bradyrhizobium japonicum USDA 110] Length = 309 Score = 307 bits (787), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 148/189 (78%), Positives = 173/189 (91%) Query: 2 LRAPAAGLVTEVRTAPGAPASPQAPPMFKISINNEIELDAEVPGFQLLKLNPGANVRISR 61 L+APA GLVTEVRT GAPASPQA PMF+I++NNEIELDA+VP + KL+ GA VRISR Sbjct: 121 LKAPAPGLVTEVRTIVGAPASPQAGPMFRIAVNNEIELDAQVPAVHMPKLSAGATVRISR 180 Query: 62 DDAPDMVGKVRQISPQIDRTTQLGHVRITINNNPTLKVGMFARANIDAKRSCGVAVPRTA 121 DDAPD++G+VR ++P+IDR TQLG VRI++ NNP+LKVG+FARA+IDAKRSCGVAVP+TA Sbjct: 181 DDAPDLIGRVRLVAPEIDRATQLGRVRISVTNNPSLKVGVFARASIDAKRSCGVAVPKTA 240 Query: 122 IDRLTLQVVKGNTVETRRVRVGLTSDTSTEILEGLDVGEIVVADAGTSLHDGDQIKTMFA 181 ID LT+QVVKGNT+ETR+VRVGL+SDT+TEILEGLDVGEIVVADAG+SLHDGDQIKTMFA Sbjct: 241 IDHLTVQVVKGNTIETRKVRVGLSSDTATEILEGLDVGEIVVADAGSSLHDGDQIKTMFA 300 Query: 182 DELDRTRSR 190 DELDRTR R Sbjct: 301 DELDRTRVR 309 >ref|YP_578799.1| secretion protein HlyD [Nitrobacter hamburgensis X14] gb|ABE64339.1| secretion protein HlyD [Nitrobacter hamburgensis X14] Length = 295 Score = 300 bits (769), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 143/190 (75%), Positives = 170/190 (89%) Query: 1 VLRAPAAGLVTEVRTAPGAPASPQAPPMFKISINNEIELDAEVPGFQLLKLNPGANVRIS 60 VLRAPAAGL+T+VRTA GA ASPQA PMF+I+INNE+ELDAEVP +LKLNPGA+ RIS Sbjct: 106 VLRAPAAGLLTQVRTAVGALASPQAGPMFRIAINNEVELDAEVPSIHILKLNPGASARIS 165 Query: 61 RDDAPDMVGKVRQISPQIDRTTQLGHVRITINNNPTLKVGMFARANIDAKRSCGVAVPRT 120 R+D PD+VG VR +SP+IDR TQ+GHVR++++ +PTL++GMFAR +IDA+RSCGVAVPR+ Sbjct: 166 REDGPDLVGSVRLVSPEIDRKTQMGHVRLSLSADPTLRIGMFARVSIDARRSCGVAVPRS 225 Query: 121 AIDRLTLQVVKGNTVETRRVRVGLTSDTSTEILEGLDVGEIVVADAGTSLHDGDQIKTMF 180 AIDRLT+QVV GN VETRRVRVGLTSDT EILEGL VGEIVVADAGTSLHDGD+++ MF Sbjct: 226 AIDRLTVQVVNGNIVETRRVRVGLTSDTGVEILEGLKVGEIVVADAGTSLHDGDRVRAMF 285 Query: 181 ADELDRTRSR 190 ADELDR+R R Sbjct: 286 ADELDRSRVR 295 >ref|YP_001208777.1| HlyD family secretion protein [Bradyrhizobium sp. ORS 278] emb|CAL80562.1| putative HlyD family Secretion protein [Bradyrhizobium sp. ORS 278] Length = 308 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 141/189 (74%), Positives = 168/189 (88%) Query: 2 LRAPAAGLVTEVRTAPGAPASPQAPPMFKISINNEIELDAEVPGFQLLKLNPGANVRISR 61 LRAP++G+VTEVRT GAPASPQA PMF+I++NNE+ELDAEVP LLKL+PGA RI+R Sbjct: 120 LRAPSSGVVTEVRTIAGAPASPQAGPMFRIAVNNELELDAEVPSIHLLKLSPGAPARITR 179 Query: 62 DDAPDMVGKVRQISPQIDRTTQLGHVRITINNNPTLKVGMFARANIDAKRSCGVAVPRTA 121 DD PD++G++R ++PQ+DRTTQLGH RI + NP+LK GMFARANIDA+RSCGVA+P TA Sbjct: 180 DDLPDIIGRLRVVAPQVDRTTQLGHARIALTGNPSLKPGMFARANIDARRSCGVAIPNTA 239 Query: 122 IDRLTLQVVKGNTVETRRVRVGLTSDTSTEILEGLDVGEIVVADAGTSLHDGDQIKTMFA 181 ID LT+QVVKG+T+ETRRVRVGL SDTSTEILEGL GEIVVADAG+SLHDGDQIKTMFA Sbjct: 240 IDHLTIQVVKGDTIETRRVRVGLVSDTSTEILEGLTEGEIVVADAGSSLHDGDQIKTMFA 299 Query: 182 DELDRTRSR 190 +++DRTR R Sbjct: 300 EDIDRTRVR 308 >ref|ZP_01047765.1| Secretion protein HlyD [Nitrobacter sp. Nb-311A] gb|EAQ34296.1| Secretion protein HlyD [Nitrobacter sp. Nb-311A] Length = 339 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 137/190 (72%), Positives = 172/190 (90%) Query: 1 VLRAPAAGLVTEVRTAPGAPASPQAPPMFKISINNEIELDAEVPGFQLLKLNPGANVRIS 60 VLRAPAAGLVTEVRTA GAPASPQA PMF+I++N E+ELDAEVP LLKLNPGA+ RIS Sbjct: 150 VLRAPAAGLVTEVRTAVGAPASPQAGPMFRIAVNGEVELDAEVPSIHLLKLNPGASARIS 209 Query: 61 RDDAPDMVGKVRQISPQIDRTTQLGHVRITINNNPTLKVGMFARANIDAKRSCGVAVPRT 120 R+D PD++G++R +SP+IDR TQ+GHVR++++ +PTL++GMFARA+IDA+RSCGVA+PR+ Sbjct: 210 REDGPDLIGRIRLVSPEIDRKTQMGHVRLSLSEDPTLRIGMFARASIDARRSCGVAIPRS 269 Query: 121 AIDRLTLQVVKGNTVETRRVRVGLTSDTSTEILEGLDVGEIVVADAGTSLHDGDQIKTMF 180 AID LT+QV+ G+ VETRRVR+GLTSD + EILEGL VGEIVVADAGTSLHDGD++KT+F Sbjct: 270 AIDHLTVQVINGDVVETRRVRIGLTSDAAVEILEGLKVGEIVVADAGTSLHDGDRVKTIF 329 Query: 181 ADELDRTRSR 190 D+LDR+R+R Sbjct: 330 PDDLDRSRAR 339 >ref|YP_001236740.1| HlyD family secretion protein [Bradyrhizobium sp. BTAi1] gb|ABQ32834.1| putative HlyD family Secretion protein [Bradyrhizobium sp. BTAi1] Length = 308 Score = 297 bits (760), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 142/189 (75%), Positives = 168/189 (88%) Query: 2 LRAPAAGLVTEVRTAPGAPASPQAPPMFKISINNEIELDAEVPGFQLLKLNPGANVRISR 61 LRAPAAG+VTEVRT GAPASPQA PMF+I++NNE+ELDAEVP LLKL+PG RI+R Sbjct: 120 LRAPAAGVVTEVRTIAGAPASPQAGPMFRIAVNNELELDAEVPSVHLLKLSPGLPARITR 179 Query: 62 DDAPDMVGKVRQISPQIDRTTQLGHVRITINNNPTLKVGMFARANIDAKRSCGVAVPRTA 121 D+ PD++G++R ++PQ+DR+TQLGH RIT+ ++ TLK GMFARANIDA+RSCGVAVP TA Sbjct: 180 DNLPDIIGRLRVVAPQVDRSTQLGHARITLTSSATLKPGMFARANIDARRSCGVAVPNTA 239 Query: 122 IDRLTLQVVKGNTVETRRVRVGLTSDTSTEILEGLDVGEIVVADAGTSLHDGDQIKTMFA 181 ID LT+QVVKGNT+ETRRVRVGL SDTSTEILEGL GEIVVADAG+SLHDGDQIKTMFA Sbjct: 240 IDHLTIQVVKGNTIETRRVRVGLVSDTSTEILEGLAEGEIVVADAGSSLHDGDQIKTMFA 299 Query: 182 DELDRTRSR 190 +++DRTR R Sbjct: 300 EDIDRTRVR 308