BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0056.0019.p (210 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774631.1| hypothetical protein bll7991 [Bradyrhizobium ja... 375 e-102 ref|YP_001220433.1| hypothetical protein BBta_p0074 [Bradyrhizob... 361 5e-98 ref|YP_003067041.1| hypothetical protein METDI1447 [Methylobacte... 328 2e-88 ref|YP_001109937.1| hypothetical protein Bcep1808_7278 [Burkhold... 313 9e-84 ref|ZP_06844037.1| Isoprenylcysteine carboxyl methyltransferase ... 308 4e-82 >ref|NP_774631.1| hypothetical protein bll7991 [Bradyrhizobium japonicum USDA 110] dbj|BAC53256.1| bll7991 [Bradyrhizobium japonicum USDA 110] Length = 225 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/211 (85%), Positives = 193/211 (91%), Gaps = 1/211 (0%) Query: 1 VIVNSAVFIFFAYTFFKPQTPRDWRSFSAFSAFLVALFAEMYGFPLTIYFLSGWLQSRFP 60 VIVNS VFI FAY+FFKPQT RDWRSF AFSAFLVALF EMYGFPLTIYFLSGWLQS +P Sbjct: 15 VIVNSVVFILFAYSFFKPQTARDWRSFGAFSAFLVALFVEMYGFPLTIYFLSGWLQSHYP 74 Query: 61 DIDWLSHDAGHLLEMMFGWKANPHAGPFHILSFVFIGGGFILISAAWKVLYDAQQAGRLA 120 ++DW SHDAGHLLEMMFGWK NPHAGPFHILSF+FIG GF+LISAAW+VLYDAQQ LA Sbjct: 75 NVDWFSHDAGHLLEMMFGWKTNPHAGPFHILSFIFIGAGFVLISAAWRVLYDAQQTRSLA 134 Query: 121 TTGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYVRLAQTEERDARAEFGD 180 T+GPYSYV HPQYVGFI+VMFGFLLQWPTILTLAMFPVLTVMYVRLA TEE+DARAEFGD Sbjct: 135 TSGPYSYVLHPQYVGFIMVMFGFLLQWPTILTLAMFPVLTVMYVRLAHTEEQDARAEFGD 194 Query: 181 AYARYAVDVPGFIPKLSRLFGT-ATSGYRHG 210 AY RYA DVPGFIPKLSR+FGT +T GYRHG Sbjct: 195 AYVRYAADVPGFIPKLSRVFGTESTGGYRHG 225 >ref|YP_001220433.1| hypothetical protein BBta_p0074 [Bradyrhizobium sp. BTAi1] gb|ABQ39761.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 253 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 176/211 (83%), Positives = 189/211 (89%), Gaps = 1/211 (0%) Query: 1 VIVNSAVFIFFAYTFFKPQTPRDWRSFSAFSAFLVALFAEMYGFPLTIYFLSGWLQSRFP 60 VIVNS VFI FAY+FFKPQT RDWRSFSAFSAFLVALF EMYGFPLTIYFLSGWLQS +P Sbjct: 43 VIVNSVVFILFAYSFFKPQTSRDWRSFSAFSAFLVALFVEMYGFPLTIYFLSGWLQSHYP 102 Query: 61 DIDWLSHDAGHLLEMMFGWKANPHAGPFHILSFVFIGGGFILISAAWKVLYDAQQAGRLA 120 ++DW SHDAGHLLEMMFGWK NPHAGPFHILSF+FIG GF+LISAAW+VLYDAQQ LA Sbjct: 103 NVDWFSHDAGHLLEMMFGWKTNPHAGPFHILSFIFIGAGFVLISAAWRVLYDAQQTCGLA 162 Query: 121 TTGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYVRLAQTEERDARAEFGD 180 TTGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYV+LA+ EERDARA+FG Sbjct: 163 TTGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYVKLARGEERDARAQFGA 222 Query: 181 AYARYAVDVPGFIPKLSRLFGTA-TSGYRHG 210 AY RYA +VP FIPK R+ G A +S YRHG Sbjct: 223 AYDRYATEVPAFIPKPGRVLGRAPSSDYRHG 253 >ref|YP_003067041.1| hypothetical protein METDI1447 [Methylobacterium extorquens DM4] emb|CAX23053.1| putative protein-S-isoprenylcysteine methyltransferase [Methylobacterium extorquens DM4] Length = 229 Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 152/205 (74%), Positives = 181/205 (88%) Query: 1 VIVNSAVFIFFAYTFFKPQTPRDWRSFSAFSAFLVALFAEMYGFPLTIYFLSGWLQSRFP 60 V++NSA+FI FA++FFKP+TPRDWRSF AFSAFLVALF EMYGFPLTIY LSGWLQSRFP Sbjct: 14 VLLNSAIFILFAFSFFKPRTPRDWRSFGAFSAFLVALFTEMYGFPLTIYVLSGWLQSRFP 73 Query: 61 DIDWLSHDAGHLLEMMFGWKANPHAGPFHILSFVFIGGGFILISAAWKVLYDAQQAGRLA 120 D+DWLSHDAGHLLEM+FGWKANPH GPFH+LSFVFIG GF+LI+ AW+VL++AQ++G LA Sbjct: 74 DVDWLSHDAGHLLEMLFGWKANPHFGPFHVLSFVFIGAGFMLIAQAWRVLHEAQRSGMLA 133 Query: 121 TTGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYVRLAQTEERDARAEFGD 180 T GPY+YVRHPQYVGF+ V+FGFLLQWPT+LTL MFPVL +MY+RLA+ EERDA A+FG+ Sbjct: 134 TRGPYTYVRHPQYVGFVFVLFGFLLQWPTLLTLLMFPVLVIMYLRLAKAEERDAIAQFGE 193 Query: 181 AYARYAVDVPGFIPKLSRLFGTATS 205 AY RY + P F+P SRL G + + Sbjct: 194 AYLRYMRETPAFVPGFSRLAGRSPA 218 >ref|YP_001109937.1| hypothetical protein Bcep1808_7278 [Burkholderia vietnamiensis G4] gb|ABO60156.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 224 Score = 313 bits (803), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 150/205 (73%), Positives = 170/205 (82%) Query: 2 IVNSAVFIFFAYTFFKPQTPRDWRSFSAFSAFLVALFAEMYGFPLTIYFLSGWLQSRFPD 61 +VNSA+FI FA+TFFKP+T RDWRSFSAFSAFL+ALF EMYGFPLTIY LSGWLQS +P Sbjct: 15 VVNSAIFILFAFTFFKPKTKRDWRSFSAFSAFLIALFTEMYGFPLTIYLLSGWLQSHYPQ 74 Query: 62 IDWLSHDAGHLLEMMFGWKANPHAGPFHILSFVFIGGGFILISAAWKVLYDAQQAGRLAT 121 ++W SHDAGHLLEMMFGWK NPH GPFH+LSF FIGGGF LISA W+VLY AQ+ LAT Sbjct: 75 VNWFSHDAGHLLEMMFGWKTNPHFGPFHLLSFAFIGGGFWLISAGWQVLYAAQRRRTLAT 134 Query: 122 TGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYVRLAQTEERDARAEFGDA 181 TG Y+YVRHPQY GF+L+MFGFLLQWPT+LTL MFPVL MYVRLA+ EER++ EFG A Sbjct: 135 TGVYAYVRHPQYDGFVLIMFGFLLQWPTLLTLVMFPVLVFMYVRLARAEERESMTEFGPA 194 Query: 182 YARYAVDVPGFIPKLSRLFGTATSG 206 Y RY DVP FIP+L G +T G Sbjct: 195 YRRYMDDVPAFIPRLGARHGGSTHG 219 >ref|ZP_06844037.1| Isoprenylcysteine carboxyl methyltransferase [Burkholderia sp. Ch1-1] gb|EFG68378.1| Isoprenylcysteine carboxyl methyltransferase [Burkholderia sp. Ch1-1] Length = 224 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 147/205 (71%), Positives = 169/205 (82%) Query: 2 IVNSAVFIFFAYTFFKPQTPRDWRSFSAFSAFLVALFAEMYGFPLTIYFLSGWLQSRFPD 61 ++NSA+FI FA+TFFKP+T RDWRSF AFSAFL+ALF EMYGFPLTIY SGWLQS +P Sbjct: 15 VINSAIFILFAFTFFKPKTKRDWRSFGAFSAFLIALFTEMYGFPLTIYLFSGWLQSHYPQ 74 Query: 62 IDWLSHDAGHLLEMMFGWKANPHAGPFHILSFVFIGGGFILISAAWKVLYDAQQAGRLAT 121 ++WLSHDAGHLLEMMFGWKANPH GPFH+LSFVFIGGGF ISA W+VLY AQ+ LAT Sbjct: 75 VNWLSHDAGHLLEMMFGWKANPHFGPFHLLSFVFIGGGFWAISAGWQVLYAAQRRHTLAT 134 Query: 122 TGPYSYVRHPQYVGFILVMFGFLLQWPTILTLAMFPVLTVMYVRLAQTEERDARAEFGDA 181 TG Y+YVRHPQY GF+L+MFGFLLQWPT+LTL MFPVL MYVRLA+ EER++ EFG Sbjct: 135 TGVYAYVRHPQYDGFVLIMFGFLLQWPTLLTLVMFPVLVFMYVRLARAEERESMTEFGPV 194 Query: 182 YARYAVDVPGFIPKLSRLFGTATSG 206 Y +Y DVP FIP+L G +T G Sbjct: 195 YRQYMDDVPAFIPRLGARRGGSTHG 219