BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0056.0007.p         (68 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA27142.1| AlNc14C464G11798 [Albugo laibachii Nc14]               37   0.91 

>emb|CCA27142.1| AlNc14C464G11798 [Albugo laibachii Nc14]
          Length = 125

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 1   MSRKIARKAVKPDAKNPISA-LRFAVDRKLILVAEAPPDGASIVRR--IAANASVKRPWX 57
           M +  ARKA+K ++  P+SA LR   DR+L L A+        +R   ++    V +P  
Sbjct: 54  MEQNRARKALKNNSGKPLSALLRSTTDRRLRLEADCSIRELKFIRNALVSWQMQVNKPMS 113

Query: 58  AVGRAGLCSV 67
            V R+ LCS+
Sbjct: 114 TVSRSELCSL 123