BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0055.0007.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770920.1| ThiJ/PfpI family protein [Bradyrhizobium japoni... 372 e-101 ref|YP_486644.1| ThiJ/PfpI [Rhodopseudomonas palustris HaA2] >gi... 350 9e-95 ref|YP_001240192.1| hypothetical protein BBta_4230 [Bradyrhizobi... 333 1e-89 ref|YP_004109399.1| ThiJ/PfpI domain-containing protein [Rhodops... 329 2e-88 ref|YP_001205489.1| putative DJ-1/PfpI family protein [Bradyrhiz... 328 3e-88 >ref|NP_770920.1| ThiJ/PfpI family protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49545.1| bll4280 [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/227 (77%), Positives = 204/227 (89%) Query: 1 MTEPLQIGLLVFPKVTQLDLTGPLQVFSSVPGAKVHLIWKRIEPVPTDSVMVLTPTTTFA 60 M+ PLQIGLLVFP+VTQLD TGPLQVFS+VPGAK+HLIWKRIEPVP+DSV+ LTPTTTFA Sbjct: 1 MSSPLQIGLLVFPRVTQLDFTGPLQVFSAVPGAKLHLIWKRIEPVPSDSVLTLTPTTTFA 60 Query: 61 DCPQLDVICVPGGFGTDDMVGDQDMLAFLRRQAERAKYVTSVCTGSLVLGAAGLLKGYRA 120 DCPQLDVICVPGG GT+D++ D+++L FLRRQAE A+YVTSVCTG+LVLGAAGLLKGYRA Sbjct: 61 DCPQLDVICVPGGGGTNDLLNDEEVLDFLRRQAEGARYVTSVCTGALVLGAAGLLKGYRA 120 Query: 121 TTHWSAIDFLSSFGAIPTRTRVCVDRNRFTGGGVTAGIDFALTLVSELVDRKTAEAIQLR 180 THWSA++ L FGA PT+TRVC+DRNR TGGGVTAGIDFALTLVS LVDR TAEAIQL+ Sbjct: 121 ATHWSAMEMLGQFGATPTKTRVCIDRNRVTGGGVTAGIDFALTLVSILVDRTTAEAIQLQ 180 Query: 181 LEYNPAPPFNAGSPDTAPAEILAFMKERIAPSQARRADLMGRAAARL 227 +EYNPAPPF +GSPDTAPAE+LA ++ER A +QARR + + RAA R+ Sbjct: 181 IEYNPAPPFTSGSPDTAPAEVLALLRERGAANQARRLEAVKRAAERV 227 >ref|YP_486644.1| ThiJ/PfpI [Rhodopseudomonas palustris HaA2] gb|ABD07733.1| ThiJ/PfpI [Rhodopseudomonas palustris HaA2] Length = 234 Score = 350 bits (898), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 167/224 (74%), Positives = 194/224 (86%) Query: 5 LQIGLLVFPKVTQLDLTGPLQVFSSVPGAKVHLIWKRIEPVPTDSVMVLTPTTTFADCPQ 64 LQIGLL+FP +TQLDLTGPLQV S +PGA VHLI K + PVP+D+V++L PT TFADCPQ Sbjct: 4 LQIGLLLFPNLTQLDLTGPLQVLSRIPGATVHLISKTMAPVPSDAVLLLPPTITFADCPQ 63 Query: 65 LDVICVPGGFGTDDMVGDQDMLAFLRRQAERAKYVTSVCTGSLVLGAAGLLKGYRATTHW 124 LDVICVPGG+GTDD+VGD D L FLRRQAE A+YVTSVCTGSLVLGAAGLL+GYRATTHW Sbjct: 64 LDVICVPGGYGTDDLVGDDDTLDFLRRQAEGARYVTSVCTGSLVLGAAGLLRGYRATTHW 123 Query: 125 SAIDFLSSFGAIPTRTRVCVDRNRFTGGGVTAGIDFALTLVSELVDRKTAEAIQLRLEYN 184 SAID L++FGAIP R+RVC+DRNR TGGGVTAGIDFALTLV L DR TA+AIQL LEYN Sbjct: 124 SAIDDLAAFGAIPDRSRVCIDRNRITGGGVTAGIDFALTLVELLADRTTAQAIQLTLEYN 183 Query: 185 PAPPFNAGSPDTAPAEILAFMKERIAPSQARRADLMGRAAARLS 228 PAPPFNAGSP+TAP ++A +KER+ ++ RR++ + RAAARL Sbjct: 184 PAPPFNAGSPETAPEPVVAMLKERLQGARQRRSESVARAAARLQ 227 >ref|YP_001240192.1| hypothetical protein BBta_4230 [Bradyrhizobium sp. BTAi1] gb|ABQ36286.1| hypothetical protein BBta_4230 [Bradyrhizobium sp. BTAi1] Length = 232 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 159/228 (69%), Positives = 186/228 (81%) Query: 1 MTEPLQIGLLVFPKVTQLDLTGPLQVFSSVPGAKVHLIWKRIEPVPTDSVMVLTPTTTFA 60 M EPL I ++FP VTQLDLTGP+QVFSSVPGA +HL WK I PVPTDSV+ L PTTTFA Sbjct: 1 MAEPLSIAFVLFPHVTQLDLTGPVQVFSSVPGATLHLAWKTIAPVPTDSVLTLLPTTTFA 60 Query: 61 DCPQLDVICVPGGFGTDDMVGDQDMLAFLRRQAERAKYVTSVCTGSLVLGAAGLLKGYRA 120 DCPQ D+IC+PGGFG D ++ D +++ F+RRQA A Y+TSVCTGSL LGAAGLL GYRA Sbjct: 61 DCPQSDIICIPGGFGVDAILNDDEVIGFIRRQAAGASYITSVCTGSLALGAAGLLDGYRA 120 Query: 121 TTHWSAIDFLSSFGAIPTRTRVCVDRNRFTGGGVTAGIDFALTLVSELVDRKTAEAIQLR 180 THWSA + L+ FGA + RVC+DRNR TGGGVTAGIDFALT+VS+L+DR TAEAIQLR Sbjct: 121 ATHWSARECLALFGATVSTERVCIDRNRITGGGVTAGIDFALTVVSQLLDRPTAEAIQLR 180 Query: 181 LEYNPAPPFNAGSPDTAPAEILAFMKERIAPSQARRADLMGRAAARLS 228 LEYNPAPPF AGSPDTAP E+L+ M ERIAP + RR + RAA+RL+ Sbjct: 181 LEYNPAPPFTAGSPDTAPPEVLSRMLERIAPFRTRRVEAAERAASRLA 228 >ref|YP_004109399.1| ThiJ/PfpI domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU44666.1| ThiJ/PfpI domain protein [Rhodopseudomonas palustris DX-1] Length = 234 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 155/222 (69%), Positives = 188/222 (84%) Query: 7 IGLLVFPKVTQLDLTGPLQVFSSVPGAKVHLIWKRIEPVPTDSVMVLTPTTTFADCPQLD 66 IGLL+FP +TQLDLTGPLQVFS +P AKV+L+ K + PV +D+ ++L PT FA CPQLD Sbjct: 6 IGLLLFPNLTQLDLTGPLQVFSRLPNAKVYLVAKAMAPVTSDTALMLPPTIDFAGCPQLD 65 Query: 67 VICVPGGFGTDDMVGDQDMLAFLRRQAERAKYVTSVCTGSLVLGAAGLLKGYRATTHWSA 126 VICVPGG GTDD+V D+D LAFLRRQAE+A+Y+TSVCTG+LVLGAAGLL+GYRATTHWSA Sbjct: 66 VICVPGGAGTDDLVNDEDTLAFLRRQAEQARYLTSVCTGALVLGAAGLLRGYRATTHWSA 125 Query: 127 IDFLSSFGAIPTRTRVCVDRNRFTGGGVTAGIDFALTLVSELVDRKTAEAIQLRLEYNPA 186 ++ L +FGAIP R+RVC+DRNR +GGGVTAGIDFALTL L DR TA+AIQL LEYNPA Sbjct: 126 LEDLKAFGAIPERSRVCIDRNRISGGGVTAGIDFALTLAELLADRSTAQAIQLMLEYNPA 185 Query: 187 PPFNAGSPDTAPAEILAFMKERIAPSQARRADLMGRAAARLS 228 PPFNAGSPDTAP E++A +K+R+ ++ RR D + RA+ RLS Sbjct: 186 PPFNAGSPDTAPQEVVAMLKQRMQGARQRRVDAVKRASDRLS 227 >ref|YP_001205489.1| putative DJ-1/PfpI family protein [Bradyrhizobium sp. ORS 278] emb|CAL77263.1| conserved hypothetical protein; putative DJ-1/PfpI family protein [Bradyrhizobium sp. ORS 278] Length = 231 Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 156/211 (73%), Positives = 180/211 (85%) Query: 1 MTEPLQIGLLVFPKVTQLDLTGPLQVFSSVPGAKVHLIWKRIEPVPTDSVMVLTPTTTFA 60 M PL I L++FP VTQLDLTGP+QVFSSVPGA +HL+WKRIEP+PTDSV+ L PTTTFA Sbjct: 1 MAAPLSIALVLFPHVTQLDLTGPVQVFSSVPGATLHLVWKRIEPIPTDSVLTLLPTTTFA 60 Query: 61 DCPQLDVICVPGGFGTDDMVGDQDMLAFLRRQAERAKYVTSVCTGSLVLGAAGLLKGYRA 120 +CPQ DVIC+PGGFG D ++ D +++ F+RRQAE AKY+TSVCTGSL LGAAGLL+GYRA Sbjct: 61 ECPQADVICIPGGFGIDAILDDPEVIGFIRRQAEGAKYITSVCTGSLALGAAGLLEGYRA 120 Query: 121 TTHWSAIDFLSSFGAIPTRTRVCVDRNRFTGGGVTAGIDFALTLVSELVDRKTAEAIQLR 180 THWSA + L FGA + RVCVDRNR TGGGVTAGIDFALTLV++LVDR TAE+IQLR Sbjct: 121 ATHWSARECLPLFGATISTERVCVDRNRITGGGVTAGIDFALTLVAQLVDRPTAESIQLR 180 Query: 181 LEYNPAPPFNAGSPDTAPAEILAFMKERIAP 211 LEYNPAPPF AGSPDTAP E+L+ M ERIAP Sbjct: 181 LEYNPAPPFTAGSPDTAPPEVLSRMLERIAP 211