BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0054.0026.p         (220 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001236266.1| translation initiation factor IF-2 [Bradyrhi...   441   e-122
ref|YP_001202275.1| translation initiation factor IF-2 [Bradyrhi...   439   e-121
ref|ZP_08628061.1| translation initiation factor 2 [Bradyrhizobi...   436   e-120
ref|ZP_07026568.1| translation initiation factor IF-2 [Afipia sp...   422   e-116
ref|YP_004631002.1| translation initiation factor IF-2 [Oligotro...   418   e-115

>ref|YP_001236266.1| translation initiation factor IF-2 [Bradyrhizobium sp. BTAi1]
 sp|A5E866.1|IF2_BRASB RecName: Full=Translation initiation factor IF-2
 gb|ABQ32360.1| bacterial translation initiation factor 2 (bIF-2) [Bradyrhizobium
           sp. BTAi1]
          Length = 921

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/220 (96%), Positives = 218/220 (99%)

Query: 1   MRGSLEQMMSQLKTAGRKEFPLIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 60
           MRGSLEQMMSQLKTAGRKEFPL++KADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS
Sbjct: 702 MRGSLEQMMSQLKTAGRKEFPLVIKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 761

Query: 61  ESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPT 120
           ESDVTLAEGFNAAIIGFSVRANKEAAA AKRNGIEIRYYNIIYDLVDD+KKAMSGLLAPT
Sbjct: 762 ESDVTLAEGFNAAIIGFSVRANKEAAALAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPT 821

Query: 121 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 180
           LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK
Sbjct: 822 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 881

Query: 181 DEVKEVVSGQECGMAFENYGDMRVGDVIECYRIETIQRSL 220
           DEVKEV +GQECGMAFE+YGDMRVGDVIECYR+ETIQRSL
Sbjct: 882 DEVKEVQAGQECGMAFESYGDMRVGDVIECYRVETIQRSL 921


>ref|YP_001202275.1| translation initiation factor IF-2 [Bradyrhizobium sp. ORS 278]
 sp|A4YJE9.1|IF2_BRASO RecName: Full=Translation initiation factor IF-2
 emb|CAL74025.1| Translation initiation factor IF-2 [Bradyrhizobium sp. ORS 278]
          Length = 921

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/220 (95%), Positives = 218/220 (99%)

Query: 1   MRGSLEQMMSQLKTAGRKEFPLIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 60
           MRGSLEQMMSQLKTAGRKEFPL++KADVQGSLEAILGSLEKLGT+EVAARILHAGVGGIS
Sbjct: 702 MRGSLEQMMSQLKTAGRKEFPLVIKADVQGSLEAILGSLEKLGTEEVAARILHAGVGGIS 761

Query: 61  ESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPT 120
           ESDVTLAEGFNAAIIGFSVRANKEAAA AKRNGIEIRYYNIIYDLVDD+KKAMSGLLAPT
Sbjct: 762 ESDVTLAEGFNAAIIGFSVRANKEAAALAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPT 821

Query: 121 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 180
           LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK
Sbjct: 822 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 881

Query: 181 DEVKEVVSGQECGMAFENYGDMRVGDVIECYRIETIQRSL 220
           DEVK+V +GQECGMAFENYGDMRVGDVIECYR+ETIQRSL
Sbjct: 882 DEVKDVQAGQECGMAFENYGDMRVGDVIECYRVETIQRSL 921


>ref|ZP_08628061.1| translation initiation factor 2 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08970.1| translation initiation factor 2 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 860

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/220 (95%), Positives = 216/220 (98%)

Query: 1   MRGSLEQMMSQLKTAGRKEFPLIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 60
           MRGSLEQMMSQLKT GRK+FPL+VKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS
Sbjct: 641 MRGSLEQMMSQLKTTGRKDFPLVVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 700

Query: 61  ESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPT 120
           ESDVTLAEGFNAAIIGFSVRANKEAAA AKRNGIEIRYYNIIYDLVDD+KKAMSGLLAPT
Sbjct: 701 ESDVTLAEGFNAAIIGFSVRANKEAAALAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPT 760

Query: 121 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 180
           LRE+MLGNAQILEVFNISKVGK+AGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK
Sbjct: 761 LRESMLGNAQILEVFNISKVGKIAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 820

Query: 181 DEVKEVVSGQECGMAFENYGDMRVGDVIECYRIETIQRSL 220
           DEVKEV SGQECGMAFENY DMRVGDVIECYR+ETIQRSL
Sbjct: 821 DEVKEVQSGQECGMAFENYQDMRVGDVIECYRVETIQRSL 860


>ref|ZP_07026568.1| translation initiation factor IF-2 [Afipia sp. 1NLS2]
 gb|EFI53710.1| translation initiation factor IF-2 [Afipia sp. 1NLS2]
          Length = 864

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/220 (90%), Positives = 215/220 (97%)

Query: 1   MRGSLEQMMSQLKTAGRKEFPLIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 60
           MRGSLEQMMSQLKT+GRK+FPL+VKADVQGSLEAI+GSL+KLGT+EVAARILHAGVGGIS
Sbjct: 645 MRGSLEQMMSQLKTSGRKDFPLVVKADVQGSLEAIIGSLDKLGTEEVAARILHAGVGGIS 704

Query: 61  ESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPT 120
           ESDVTLAEGFNAAIIGFSVRANKEAAA AKR+GIEIRYYNIIYDLVDD+KKAMSGLLAPT
Sbjct: 705 ESDVTLAEGFNAAIIGFSVRANKEAAALAKRDGIEIRYYNIIYDLVDDVKKAMSGLLAPT 764

Query: 121 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 180
           LRETMLGNAQ+LEVF+ISKVGK+AGCRVTDGTVERGANVRLIRDNVV+HEGKLS LKRFK
Sbjct: 765 LRETMLGNAQVLEVFHISKVGKIAGCRVTDGTVERGANVRLIRDNVVIHEGKLSQLKRFK 824

Query: 181 DEVKEVVSGQECGMAFENYGDMRVGDVIECYRIETIQRSL 220
           D+ KEVV+GQECGM+FENY DMR GDVIECYR+ETIQRSL
Sbjct: 825 DDAKEVVAGQECGMSFENYQDMRPGDVIECYRVETIQRSL 864


>ref|YP_004631002.1| translation initiation factor IF-2 [Oligotropha carboxidovorans
           OM5]
 gb|AEI01187.1| translation initiation factor IF-2 [Oligotropha carboxidovorans
           OM4]
 gb|AEI04761.1| translation initiation factor IF-2 [Oligotropha carboxidovorans
           OM5]
          Length = 866

 Score =  418 bits (1075), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/220 (90%), Positives = 214/220 (97%)

Query: 1   MRGSLEQMMSQLKTAGRKEFPLIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGIS 60
           MRGSLEQMMSQLKTAGRKEFPL+VKADVQGSLEAI+GSL+KLGT+EVAARILHAGVGGIS
Sbjct: 647 MRGSLEQMMSQLKTAGRKEFPLVVKADVQGSLEAIIGSLDKLGTEEVAARILHAGVGGIS 706

Query: 61  ESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPT 120
           ESDVTLAEGF AAIIGFSVRANKEAAA AKR+GIEIRYYNIIYDLVDD+KKAMSGLLAPT
Sbjct: 707 ESDVTLAEGFGAAIIGFSVRANKEAAALAKRDGIEIRYYNIIYDLVDDVKKAMSGLLAPT 766

Query: 121 LRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFK 180
           LRETMLGNAQ+LEVF+ISKVGK+AGCRVTDGTVERGANVRLIRD+VV+HEGKLS LKRFK
Sbjct: 767 LRETMLGNAQVLEVFHISKVGKIAGCRVTDGTVERGANVRLIRDDVVIHEGKLSQLKRFK 826

Query: 181 DEVKEVVSGQECGMAFENYGDMRVGDVIECYRIETIQRSL 220
           D+ KEV +GQECGM+FE+Y DMRVGDVIECYR+ETIQRSL
Sbjct: 827 DDAKEVTAGQECGMSFESYQDMRVGDVIECYRVETIQRSL 866