BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0054.0023.p         (89 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_530377.1| 30S ribosomal protein S15 [Rhodopseudomonas pal...   169   1e-40
ref|ZP_07026565.1| ribosomal protein S15 [Afipia sp. 1NLS2] >gi|...   169   1e-40
ref|NP_767420.1| 30S ribosomal protein S15 [Bradyrhizobium japon...   169   2e-40
ref|YP_002287514.1| ribosomal protein S15 [Oligotropha carboxido...   167   3e-40
ref|ZP_08628057.1| SSU ribosomal protein S15p [Bradyrhizobiaceae...   167   4e-40

>ref|YP_530377.1| 30S ribosomal protein S15 [Rhodopseudomonas palustris BisB18]
 sp|Q21C28.1|RS15_RHOPB RecName: Full=30S ribosomal protein S15
 gb|ABD86058.1| SSU ribosomal protein S15P [Rhodopseudomonas palustris BisB18]
          Length = 89

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/89 (93%), Positives = 86/89 (96%)

Query: 1  MSITAERKAEVIKTNANKAGDTGSPEVQVAILSERINNLTEHFKSHVKDNHSRRGLLKLV 60
          MSITAERKAEVIKTNA KAGDTGSPEVQVAILSERI NLT HFK+HVKDNHSRRGLLKLV
Sbjct: 1  MSITAERKAEVIKTNAKKAGDTGSPEVQVAILSERIANLTSHFKTHVKDNHSRRGLLKLV 60

Query: 61 STRRSLLDYIKRKDEARYKALLEKHNIRR 89
          STRRSLLDY+K+KDEARYKALLEKHNIRR
Sbjct: 61 STRRSLLDYVKKKDEARYKALLEKHNIRR 89


>ref|ZP_07026565.1| ribosomal protein S15 [Afipia sp. 1NLS2]
 gb|EFI53707.1| ribosomal protein S15 [Afipia sp. 1NLS2]
          Length = 89

 Score =  169 bits (427), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/89 (93%), Positives = 86/89 (96%)

Query: 1  MSITAERKAEVIKTNANKAGDTGSPEVQVAILSERINNLTEHFKSHVKDNHSRRGLLKLV 60
          MSITAERKAEVIKTNA KAGDTGSPEVQVAILSERI NLTEHFK+H KDNHSRRGLLKLV
Sbjct: 1  MSITAERKAEVIKTNAKKAGDTGSPEVQVAILSERIANLTEHFKTHSKDNHSRRGLLKLV 60

Query: 61 STRRSLLDYIKRKDEARYKALLEKHNIRR 89
          STRRSLLDY+K+KDEARYKALLEKHNIRR
Sbjct: 61 STRRSLLDYVKKKDEARYKALLEKHNIRR 89


>ref|NP_767420.1| 30S ribosomal protein S15 [Bradyrhizobium japonicum USDA 110]
 sp|Q89WB2.1|RS15_BRAJA RecName: Full=30S ribosomal protein S15
 dbj|BAC46045.1| 30S ribosomal protein S15 [Bradyrhizobium japonicum USDA 110]
          Length = 89

 Score =  169 bits (427), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/89 (92%), Positives = 86/89 (96%)

Query: 1  MSITAERKAEVIKTNANKAGDTGSPEVQVAILSERINNLTEHFKSHVKDNHSRRGLLKLV 60
          MSI AERKAEVIKTNA KAGDTGSPEVQVAILSERINNLT HFK+HVKDNHSRRGLLKLV
Sbjct: 1  MSIAAERKAEVIKTNATKAGDTGSPEVQVAILSERINNLTSHFKTHVKDNHSRRGLLKLV 60

Query: 61 STRRSLLDYIKRKDEARYKALLEKHNIRR 89
          STRRSLLDY+K++DEARYKALLEKHNIRR
Sbjct: 61 STRRSLLDYLKKRDEARYKALLEKHNIRR 89


>ref|YP_002287514.1| ribosomal protein S15 [Oligotropha carboxidovorans OM5]
 ref|YP_004631005.1| 30S ribosomal protein S15 [Oligotropha carboxidovorans OM5]
 sp|B6JCR9.1|RS15_OLICO RecName: Full=30S ribosomal protein S15
 gb|ACI91649.1| ribosomal protein S15 [Oligotropha carboxidovorans OM5]
 gb|AEI01190.1| 30S ribosomal protein S15 [Oligotropha carboxidovorans OM4]
 gb|AEI04764.1| 30S ribosomal protein S15 [Oligotropha carboxidovorans OM5]
          Length = 89

 Score =  167 bits (424), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/89 (92%), Positives = 86/89 (96%)

Query: 1  MSITAERKAEVIKTNANKAGDTGSPEVQVAILSERINNLTEHFKSHVKDNHSRRGLLKLV 60
          MSITAERKAEVIKTNA KAGDTGSPEVQVAILSERI NLTEHFK+H KDNHSRRGLLKLV
Sbjct: 1  MSITAERKAEVIKTNAKKAGDTGSPEVQVAILSERIANLTEHFKTHSKDNHSRRGLLKLV 60

Query: 61 STRRSLLDYIKRKDEARYKALLEKHNIRR 89
          STRRSLLDY+K+KDEARY+ALLEKHNIRR
Sbjct: 61 STRRSLLDYVKKKDEARYRALLEKHNIRR 89


>ref|ZP_08628057.1| SSU ribosomal protein S15p [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08966.1| SSU ribosomal protein S15p [Bradyrhizobiaceae bacterium SG-6C]
          Length = 89

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/89 (92%), Positives = 85/89 (95%)

Query: 1  MSITAERKAEVIKTNANKAGDTGSPEVQVAILSERINNLTEHFKSHVKDNHSRRGLLKLV 60
          MSI AERKAEVIKTNA KAGDTGSPEVQVAILSERI NLTEHFK+H KDNHSRRGLLKLV
Sbjct: 1  MSIAAERKAEVIKTNATKAGDTGSPEVQVAILSERIANLTEHFKTHSKDNHSRRGLLKLV 60

Query: 61 STRRSLLDYIKRKDEARYKALLEKHNIRR 89
          STRRSLLDY+K+KDEARYKALLEKHNIRR
Sbjct: 61 STRRSLLDYVKKKDEARYKALLEKHNIRR 89