BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0054.0021.p (712 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767419.1| polynucleotide phosphorylase/polyadenylase [Bra... 1348 0.0 ref|YP_001236270.1| polynucleotide phosphorylase/polyadenylase [... 1336 0.0 ref|YP_001989472.1| polynucleotide phosphorylase/polyadenylase [... 1324 0.0 ref|NP_945785.1| polynucleotide phosphorylase/polyadenylase [Rho... 1323 0.0 ref|YP_004106565.1| polyribonucleotide nucleotidyltransferase [R... 1320 0.0 >ref|NP_767419.1| polynucleotide phosphorylase/polyadenylase [Bradyrhizobium japonicum USDA 110] sp|Q89WB3.1|PNP_BRAJA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase dbj|BAC46044.1| polyribonucleotide nucleotidyltransferase [Bradyrhizobium japonicum USDA 110] Length = 720 Score = 1348 bits (3490), Expect = 0.0, Method: Compositional matrix adjust. Identities = 665/720 (92%), Positives = 687/720 (95%), Gaps = 8/720 (1%) Query: 1 MFNTHSVEIDWGGRPLKLETGKIARQADGAVLATYGETVVLATVVAAKAPREGVDFLPLT 60 MFN HSVEIDWGGRPLKLETGKIARQADGAV+ATYGETVVLATVVAAKAPREGVDFLPLT Sbjct: 1 MFNKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT 60 Query: 61 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH 120 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVI TVLSH Sbjct: 61 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIATVLSH 120 Query: 121 DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA 180 DMENDPDIV+LVA+SAALTLSGAPFKGPIGAARVGF NDEYVLNPTLDEM +TQLDLVVA Sbjct: 121 DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFVNDEYVLNPTLDEMVDTQLDLVVA 180 Query: 181 GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE 240 GTADAVLMVESEAKELNED+MLGAVMFGHRHFQPVINAIIELAEKAAKEPREVT IDN+ Sbjct: 181 GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNAA 240 Query: 241 IEKEMLGIAEQELRNAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE 300 +EKEMLG+ EQELR AYAIPVKQ+RYAAVG VKEKV+AH+FPEGQEPKYDKLR+AGVFKE Sbjct: 241 LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRIAGVFKE 300 Query: 301 LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG 360 LEAKIVRWNILDTGKRIDGRD+KTVRNIIAE GVLPRAHGSALFTRGETQAMVVTTLGTG Sbjct: 301 LEAKIVRWNILDTGKRIDGRDSKTVRNIIAEVGVLPRAHGSALFTRGETQAMVVTTLGTG 360 Query: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH Sbjct: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 Query: 421 EFPYTIRVVSEITESNGSSSMASVCGASLSLMXP--------AGIAMGLILEGQRFAVLS 472 EFPYTIRVVSEITESNGSSSMASVCGASL+LM AGIAMGLILE +RFAVLS Sbjct: 421 EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS 480 Query: 473 DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK 532 DILGDEDHLGDMDFKVAGT+ GITSLQMDIKIEGITEEIMKVALGQAK+GRIHILGEMAK Sbjct: 481 DILGDEDHLGDMDFKVAGTESGITSLQMDIKIEGITEEIMKVALGQAKDGRIHILGEMAK 540 Query: 533 ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 592 ALT ARAELGEYAPRIETFKI TDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS Sbjct: 541 ALTNARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 600 Query: 593 NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRV 652 +DGEAMKAAIKWIKSIAS+PEVGQIY+GTVVKVMEFGAFVNFFG+KDGLVHISQLA+ RV Sbjct: 601 SDGEAMKAAIKWIKSIASEPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV 660 Query: 653 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKTEAPAAAPREAAGE 712 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMK VDQTTGEDLEAK K APREAAGE Sbjct: 661 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKDKVAEGEKAPREAAGE 720 >ref|YP_001236270.1| polynucleotide phosphorylase/polyadenylase [Bradyrhizobium sp. BTAi1] sp|A5E870.1|PNP_BRASB RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gb|ABQ32364.1| Polyribonucleotide nucleotidyltransferase [Bradyrhizobium sp. BTAi1] Length = 720 Score = 1336 bits (3458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 653/720 (90%), Positives = 684/720 (95%), Gaps = 8/720 (1%) Query: 1 MFNTHSVEIDWGGRPLKLETGKIARQADGAVLATYGETVVLATVVAAKAPREGVDFLPLT 60 MF HSVEIDWGGRPLKLETGKIARQADGAV+ATYGETVVLATVVAAK+PREGVDFLPLT Sbjct: 1 MFTKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLT 60 Query: 61 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH 120 VDYQEK YAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVD WRNETQVIVT LSH Sbjct: 61 VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDAWRNETQVIVTTLSH 120 Query: 121 DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA 180 DMENDPDI+++VAASAALTLSG PFKGPIGAARVGFANDEY+LNPTLDEMT+TQLDLVVA Sbjct: 121 DMENDPDILAMVAASAALTLSGVPFKGPIGAARVGFANDEYILNPTLDEMTDTQLDLVVA 180 Query: 181 GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE 240 GT+DAVLMVESEAKELNED+MLGAVMFGHRHFQPVINAIIELAEKAAKEPR+V IDNS Sbjct: 181 GTSDAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPRDVAIIDNSA 240 Query: 241 IEKEMLGIAEQELRNAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE 300 IEKEMLGIAEQ+LR AYAIPVKQERYAAV AVKEKV+A+FFPEGQEPKY+KLRVA VFKE Sbjct: 241 IEKEMLGIAEQDLRKAYAIPVKQERYAAVAAVKEKVMAYFFPEGQEPKYEKLRVADVFKE 300 Query: 301 LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG 360 LEAKIVRWNILDTG+RIDGRD KTVRNI+ E GVLPRAHGSALFTRGETQA+VVTTLGTG Sbjct: 301 LEAKIVRWNILDTGRRIDGRDVKTVRNIVCEVGVLPRAHGSALFTRGETQALVVTTLGTG 360 Query: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH Sbjct: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 Query: 421 EFPYTIRVVSEITESNGSSSMASVCGASLSLMXP--------AGIAMGLILEGQRFAVLS 472 EFPYT RVVSE+TESNGSSSMA+VCG+SL+LM AGIAMGLILEG R+AVLS Sbjct: 421 EFPYTTRVVSEVTESNGSSSMATVCGSSLALMDAGVPLKRPTAGIAMGLILEGSRYAVLS 480 Query: 473 DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK 532 DILGDEDHLGDMDFKVAGT+ GITSLQMDIKIEGITEEIM+VALGQA+EGRIHILGEM+K Sbjct: 481 DILGDEDHLGDMDFKVAGTESGITSLQMDIKIEGITEEIMRVALGQAREGRIHILGEMSK 540 Query: 533 ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 592 ALTAARAELGEYAPRIETFKI TDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS Sbjct: 541 ALTAARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 600 Query: 593 NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRV 652 +DGEAMKAAIKWIKSIASDPE+GQIY+GTVVKVMEFGAFVNFFG +DGLVHISQLA RV Sbjct: 601 SDGEAMKAAIKWIKSIASDPEIGQIYDGTVVKVMEFGAFVNFFGTRDGLVHISQLADKRV 660 Query: 653 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKTEAPAAAPREAAGE 712 QKT+DVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQK E A APREAAGE Sbjct: 661 QKTTDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKAEGGAEAPREAAGE 720 >ref|YP_001989472.1| polynucleotide phosphorylase/polyadenylase [Rhodopseudomonas palustris TIE-1] sp|B3QAB0.1|PNP_RHOPT RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gb|ACE98996.1| Polyribonucleotide nucleotidyltransferase [Rhodopseudomonas palustris TIE-1] Length = 722 Score = 1324 bits (3426), Expect = 0.0, Method: Compositional matrix adjust. Identities = 648/722 (89%), Positives = 686/722 (95%), Gaps = 10/722 (1%) Query: 1 MFNTHSVEIDWGGRPLKLETGKIARQADGAVLATYGETVVLATVVAAKAPREGVDFLPLT 60 MFN HSVEIDWGGRPLKLETGK+ARQADGAV+ATYGETVVLATVVAAK+PREGVDFLPLT Sbjct: 1 MFNIHSVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLT 60 Query: 61 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH 120 VDYQEK YAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLF DGWRNETQVIVTVLSH Sbjct: 61 VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSH 120 Query: 121 DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA 180 DMENDPD++++VAASAALTLSG PFKGPIGAARVGF NDEYVLNP LDEM ETQL+LVVA Sbjct: 121 DMENDPDVLAMVAASAALTLSGVPFKGPIGAARVGFINDEYVLNPVLDEMAETQLELVVA 180 Query: 181 GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE 240 GTADAVLMVESEAKEL+E++MLGAVMFGHRHFQPVI+AII+LAEKAAKEPRE+T +D+SE Sbjct: 181 GTADAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIDLAEKAAKEPRELTVVDDSE 240 Query: 241 IEKEMLGIAEQELRNAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE 300 IEKEMLG+ EQELR AYAIPVKQ+RYAAVG VKEK +AHFFPEGQEPKYDKLR+AGVFKE Sbjct: 241 IEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKAIAHFFPEGQEPKYDKLRIAGVFKE 300 Query: 301 LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG 360 LEAKIVRWNILDTGKRIDGRD+KTVRNI+A+ GVLPR HGSALFTRGETQA+VVTTLGTG Sbjct: 301 LEAKIVRWNILDTGKRIDGRDSKTVRNILAQVGVLPRTHGSALFTRGETQALVVTTLGTG 360 Query: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 EDEQY+D+LSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH Sbjct: 361 EDEQYVDSLSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 Query: 421 EFPYTIRVVSEITESNGSSSMASVCGASLSLMXP--------AGIAMGLILEGQRFAVLS 472 EFPYTIRVVSEITESNGSSSMASVCGASL+LM AGIAMGLILEG+RFAVLS Sbjct: 421 EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFAVLS 480 Query: 473 DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK 532 DILGDEDHLGDMDFKVAGT+QGITSLQMDIKI GITEEIMKVALGQAK+GRIHILGEM+K Sbjct: 481 DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSK 540 Query: 533 ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 592 AL ARAELGE+APRIETFKI TDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS Sbjct: 541 ALDRARAELGEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 600 Query: 593 NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRV 652 +DGE++KAAIKWIKSIASDPE+G+IYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAA RV Sbjct: 601 SDGESIKAAIKWIKSIASDPEIGEIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAAGRV 660 Query: 653 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKTEAPA--AAPREAA 710 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMK VDQTTGEDLEAKQK EA A AP +AA Sbjct: 661 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKQKAEAKAEGEAPAQAA 720 Query: 711 GE 712 GE Sbjct: 721 GE 722 >ref|NP_945785.1| polynucleotide phosphorylase/polyadenylase [Rhodopseudomonas palustris CGA009] sp|Q6NCN8.1|PNP_RHOPA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase emb|CAE25876.1| polyribonucleotide nucleotidyltransferase [Rhodopseudomonas palustris CGA009] Length = 722 Score = 1323 bits (3425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/722 (90%), Positives = 685/722 (94%), Gaps = 10/722 (1%) Query: 1 MFNTHSVEIDWGGRPLKLETGKIARQADGAVLATYGETVVLATVVAAKAPREGVDFLPLT 60 MFN HSVEIDWGGRPLKLETGK+ARQADGAV+ATYGETVVLATVVAAKAPREGVDFLPLT Sbjct: 1 MFNIHSVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT 60 Query: 61 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH 120 VDYQEK YAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLF DGWRNETQVIVTVLSH Sbjct: 61 VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSH 120 Query: 121 DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA 180 DMENDPD++++VAASAALTLSG PFKGPIGAARVGF NDEYVLNP LDEM ETQL+LVVA Sbjct: 121 DMENDPDVLAMVAASAALTLSGVPFKGPIGAARVGFINDEYVLNPVLDEMAETQLELVVA 180 Query: 181 GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE 240 GTADAVLMVESEAKEL+E++MLGAVMFGHRHFQPVI+AII+LAEKAAKEPRE+T +D+SE Sbjct: 181 GTADAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIDLAEKAAKEPRELTVVDDSE 240 Query: 241 IEKEMLGIAEQELRNAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE 300 IEKEMLG+ EQELR AYAIPVKQ+RYAAVG VKEK +AHFFPEGQEPKYDKLR+AGVFKE Sbjct: 241 IEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKAIAHFFPEGQEPKYDKLRIAGVFKE 300 Query: 301 LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG 360 LEAKIVRWNILDTGKRIDGRD+KTVRNI+A+ GVLPR HGSALFTRGETQAMVVTTLGTG Sbjct: 301 LEAKIVRWNILDTGKRIDGRDSKTVRNILAQVGVLPRTHGSALFTRGETQAMVVTTLGTG 360 Query: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 EDEQY+D+LSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH Sbjct: 361 EDEQYVDSLSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 Query: 421 EFPYTIRVVSEITESNGSSSMASVCGASLSLMXP--------AGIAMGLILEGQRFAVLS 472 EFPYTIRVVSEITESNGSSSMASVCGASL+LM AGIAMGLILEG+RFAVLS Sbjct: 421 EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFAVLS 480 Query: 473 DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK 532 DILGDEDHLGDMDFKVAGT+ GITSLQMDIKI GITEEIMKVALGQAK+GRIHILGEM+K Sbjct: 481 DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSK 540 Query: 533 ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 592 AL ARAELGE+APRIETFKI TDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS Sbjct: 541 ALDRARAELGEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 600 Query: 593 NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRV 652 +DGE++KAAIKWIKSIASDPEVG+IYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAA RV Sbjct: 601 SDGESIKAAIKWIKSIASDPEVGEIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAAGRV 660 Query: 653 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKTEAPA--AAPREAA 710 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMK VDQTTGEDLEAKQK EA A AP +AA Sbjct: 661 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKQKAEAKAEGEAPAQAA 720 Query: 711 GE 712 GE Sbjct: 721 GE 722 >ref|YP_004106565.1| polyribonucleotide nucleotidyltransferase [Rhodopseudomonas palustris DX-1] gb|ADU41832.1| polyribonucleotide nucleotidyltransferase [Rhodopseudomonas palustris DX-1] Length = 722 Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/722 (90%), Positives = 685/722 (94%), Gaps = 10/722 (1%) Query: 1 MFNTHSVEIDWGGRPLKLETGKIARQADGAVLATYGETVVLATVVAAKAPREGVDFLPLT 60 MFN HSVEIDWGGRPLKLETGK+ARQADGAV+ATYGETVVLATVVAAKAPREGVDFLPLT Sbjct: 1 MFNIHSVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT 60 Query: 61 VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH 120 VDYQEK YAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLF DGWRNETQVIVTVLSH Sbjct: 61 VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSH 120 Query: 121 DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA 180 DMENDPD++++VAASAALTLSGAPF+GPIGAARVGF NDEYVLNP LDEM ETQL+LVVA Sbjct: 121 DMENDPDVLAMVAASAALTLSGAPFRGPIGAARVGFINDEYVLNPVLDEMAETQLELVVA 180 Query: 181 GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE 240 GTADAVLMVESEAKEL+E++MLGAVMFGHRHFQPVI+AIIELAEKAAKEPRE+ IDN+ Sbjct: 181 GTADAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIELAEKAAKEPRELIEIDNAA 240 Query: 241 IEKEMLGIAEQELRNAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE 300 IEKEMLG+ EQELR AYAIPVKQERYAAVG VKEK LAHFFPEGQEPKYDKLR+AGVFKE Sbjct: 241 IEKEMLGLIEQELRAAYAIPVKQERYAAVGKVKEKALAHFFPEGQEPKYDKLRIAGVFKE 300 Query: 301 LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG 360 LEAKIVRWNILDTGKRIDGRD+KTVR+I+A+AGVLPRAHGSALFTRGETQA+VVTTLGTG Sbjct: 301 LEAKIVRWNILDTGKRIDGRDSKTVRSILAQAGVLPRAHGSALFTRGETQALVVTTLGTG 360 Query: 361 EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 EDEQY+D+L+GTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH Sbjct: 361 EDEQYVDSLAGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH 420 Query: 421 EFPYTIRVVSEITESNGSSSMASVCGASLSLMXP--------AGIAMGLILEGQRFAVLS 472 EFPYTIRVVSEITESNGSSSMASVCGASL+LM AGIAMGLILEG+RFAVLS Sbjct: 421 EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFAVLS 480 Query: 473 DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK 532 DILGDEDHLGDMDFKVAGT+QGITSLQMDIKI GITEEIMKVALGQAK+GRIHILGEM+K Sbjct: 481 DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIGGITEEIMKVALGQAKDGRIHILGEMSK 540 Query: 533 ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 592 AL ARAELGE+APRIETFKI TDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS Sbjct: 541 ALDRARAELGEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS 600 Query: 593 NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRV 652 +DGE++KAAIKWIKSIASDPEVG+IYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAA RV Sbjct: 601 SDGESIKAAIKWIKSIASDPEVGEIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAAGRV 660 Query: 653 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKTEAPAA--APREAA 710 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMK VDQ TGEDLEAKQK EA AP +AA Sbjct: 661 QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQATGEDLEAKQKAEAKTEGDAPAQAA 720 Query: 711 GE 712 GE Sbjct: 721 GE 722