BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0054.0013.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_316655.1| ferric-uptake regulator [Nitrobacter winogradsk...   249   1e-64
ref|ZP_01045153.1| ferric-uptake regulator [Nitrobacter sp. Nb-3...   249   1e-64
ref|YP_575404.1| ferric uptake regulator family protein [Nitroba...   249   1e-64
ref|NP_767408.1| iron response regulator [Bradyrhizobium japonic...   246   1e-63
ref|YP_002287506.1| ferric uptake regulator, FUR family [Oligotr...   245   2e-63

>ref|YP_316655.1| ferric-uptake regulator [Nitrobacter winogradskyi Nb-255]
 gb|ABA03303.1| ferric uptake regulator, Fur family [Nitrobacter winogradskyi
           Nb-255]
          Length = 168

 Score =  249 bits (636), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 124/127 (97%)

Query: 1   MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 60
           MLQS GLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG
Sbjct: 42  MLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 101

Query: 61  LLRQVSVDGTKTYFDTNVSTHHHFYLEHNHELVDIPDPNLVLSKMPDVPEGYEISRVDMV 120
           LLRQVSVDGTKTYFDTNV+ HHHFYLE+NHELVDIPDP+LVL KMP+VPEGYEISR+DMV
Sbjct: 102 LLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDMV 161

Query: 121 VRLRKKR 127
           VRLRKKR
Sbjct: 162 VRLRKKR 168


>ref|ZP_01045153.1| ferric-uptake regulator [Nitrobacter sp. Nb-311A]
 gb|EAQ37158.1| ferric-uptake regulator [Nitrobacter sp. Nb-311A]
          Length = 168

 Score =  249 bits (636), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 124/127 (97%)

Query: 1   MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 60
           MLQS GLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG
Sbjct: 42  MLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 101

Query: 61  LLRQVSVDGTKTYFDTNVSTHHHFYLEHNHELVDIPDPNLVLSKMPDVPEGYEISRVDMV 120
           LLRQVSVDGTKTYFDTNV+ HHHFYLE+NHELVDIPDP+LVL KMP+VPEGYEISR+DMV
Sbjct: 102 LLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDMV 161

Query: 121 VRLRKKR 127
           VRLRKKR
Sbjct: 162 VRLRKKR 168


>ref|YP_575404.1| ferric uptake regulator family protein [Nitrobacter hamburgensis
           X14]
 gb|ABE60944.1| ferric uptake regulator, Fur family [Nitrobacter hamburgensis X14]
          Length = 165

 Score =  249 bits (636), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 118/127 (92%), Positives = 124/127 (97%)

Query: 1   MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 60
           MLQS GLRPTRQRMALGWLLFGKGARHLTAEMLYEEAT+AKVPVSLATVYNTLNQLTDAG
Sbjct: 39  MLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATIAKVPVSLATVYNTLNQLTDAG 98

Query: 61  LLRQVSVDGTKTYFDTNVSTHHHFYLEHNHELVDIPDPNLVLSKMPDVPEGYEISRVDMV 120
           LLRQVSVDGTKTYFDTNV+ HHHFYLE+NHELVDIPDP+LVL KMP+VPEGYEISR+DMV
Sbjct: 99  LLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDMV 158

Query: 121 VRLRKKR 127
           VRLRKKR
Sbjct: 159 VRLRKKR 165


>ref|NP_767408.1| iron response regulator [Bradyrhizobium japonicum USDA 110]
 gb|AAC32183.1| iron response regulator [Bradyrhizobium japonicum]
 dbj|BAC46033.1| iron response regulator [Bradyrhizobium japonicum USDA 110]
          Length = 163

 Score =  246 bits (627), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 117/127 (92%), Positives = 125/127 (98%)

Query: 1   MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 60
           MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG
Sbjct: 37  MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 96

Query: 61  LLRQVSVDGTKTYFDTNVSTHHHFYLEHNHELVDIPDPNLVLSKMPDVPEGYEISRVDMV 120
           LLRQVSVDGTKTYFDTNV+THHH+YLE++HELVDI DP+L LSKMP+VPEGYEI+R+DMV
Sbjct: 97  LLRQVSVDGTKTYFDTNVTTHHHYYLENSHELVDIEDPHLALSKMPEVPEGYEIARIDMV 156

Query: 121 VRLRKKR 127
           VRLRKKR
Sbjct: 157 VRLRKKR 163


>ref|YP_002287506.1| ferric uptake regulator, FUR family [Oligotropha carboxidovorans
           OM5]
 gb|ACI91641.1| ferric uptake regulator, FUR family [Oligotropha carboxidovorans
           OM5]
          Length = 173

 Score =  245 bits (625), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 118/127 (92%), Positives = 122/127 (96%)

Query: 1   MLQSAGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 60
           MLQS GLRPTRQRMALGWLLFGKG RHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG
Sbjct: 47  MLQSVGLRPTRQRMALGWLLFGKGDRHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAG 106

Query: 61  LLRQVSVDGTKTYFDTNVSTHHHFYLEHNHELVDIPDPNLVLSKMPDVPEGYEISRVDMV 120
           LLRQVSVDGTKTYFDTNVS+HHHFYLE NHELVDIPD NL+L +MP+VPEGYEISRVDMV
Sbjct: 107 LLRQVSVDGTKTYFDTNVSSHHHFYLESNHELVDIPDQNLMLQQMPEVPEGYEISRVDMV 166

Query: 121 VRLRKKR 127
           VRLRKKR
Sbjct: 167 VRLRKKR 173