BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0054.0010.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202288.1| putative D-isomer specific 2-hydroxyacid deh... 610 e-172 ref|NP_767406.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium jap... 609 e-172 ref|YP_001236280.1| putative glyoxylate reductase [Bradyrhizobiu... 609 e-172 ref|YP_779183.1| glyoxylate reductase [Rhodopseudomonas palustri... 600 e-169 ref|YP_484238.1| glycolate reductase [Rhodopseudomonas palustris... 598 e-169 >ref|YP_001202288.1| putative D-isomer specific 2-hydroxyacid dehydrogenases family protein glyoxylate reductase (glycolate reductase) [Bradyrhizobium sp. ORS 278] emb|CAL74038.1| putative D-isomer specific 2-hydroxyacid dehydrogenases family protein; putative Glyoxylate reductase (Glycolate reductase) [Bradyrhizobium sp. ORS 278] Length = 333 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 294/334 (88%), Positives = 320/334 (95%), Gaps = 1/334 (0%) Query: 1 MSVKKKPLVVVTRKLPDSIETRMRELFNARLNLDDTPMTPEQIAEAARTADVLVPTVTDM 60 MS +KKPLVVVTRKLPDS+ETRMRELF+ARLNLDD PM+ EQ+A+A RTA+VLVPTVTD Sbjct: 1 MSGRKKPLVVVTRKLPDSVETRMRELFDARLNLDDEPMSQEQLADAVRTAEVLVPTVTDH 60 Query: 61 IREDVINQPDCKLKMIANFGNGVDNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 I D++NQPDCKL+MIANFGNGVDNIDVAAA ARGITVTNTPKVLTEDTADMTMALILAV Sbjct: 61 ISADILNQPDCKLRMIANFGNGVDNIDVAAAVARGITVTNTPKVLTEDTADMTMALILAV 120 Query: 121 PRRLIEGASILTEGKQHWAGWSPTWMLGHRIGGKRLGIVGMGRIGQAVARRARAFGLQIH 180 PRRLIEGAS+LTEGK +WAGWSPTWMLGHRIGGKRLGI+GMGRIGQAVARRARAFGLQIH Sbjct: 121 PRRLIEGASVLTEGK-NWAGWSPTWMLGHRIGGKRLGIIGMGRIGQAVARRARAFGLQIH 179 Query: 181 YHNRRPVAPMIAEELGATYWESLDQMLARMDIISVNCPHTPATYHLLSARRLKLIRKEAY 240 YHNRRPVAP+IA+ELGATYWESLDQMLARMDIISVNCPHTPAT+HLLSARRLKLIRK+AY Sbjct: 180 YHNRRPVAPVIADELGATYWESLDQMLARMDIISVNCPHTPATFHLLSARRLKLIRKDAY 239 Query: 241 VVNTARGEVIDEDMLIKLIEAGDIGGAALDVYEHEPAVNPKLVRLARAGKVTLLPHMGSA 300 +VNTARGEVIDE+ + +LIEAGDI GA LDV+EHEPAVNP+LVRLA+AGKVTLLPHMGSA Sbjct: 240 IVNTARGEVIDEETMTRLIEAGDIAGAGLDVFEHEPAVNPRLVRLAKAGKVTLLPHMGSA 299 Query: 301 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML 334 TIEGRVEMGEKVIINI+TFLD H+PPDRVLPSML Sbjct: 300 TIEGRVEMGEKVIINIKTFLDNHRPPDRVLPSML 333 >ref|NP_767406.1| 2-hydroxyacid dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC46031.1| bll0766 [Bradyrhizobium japonicum USDA 110] Length = 333 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 306/334 (91%), Positives = 321/334 (96%), Gaps = 1/334 (0%) Query: 1 MSVKKKPLVVVTRKLPDSIETRMRELFNARLNLDDTPMTPEQIAEAARTADVLVPTVTDM 60 MSVKKKPLVVVTRKLPDSIETRMRELF+AR+NLDDTPM+ +QIAEAARTADVLVPTVTD Sbjct: 1 MSVKKKPLVVVTRKLPDSIETRMRELFDARINLDDTPMSADQIAEAARTADVLVPTVTDH 60 Query: 61 IREDVINQPDCKLKMIANFGNGVDNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 I D++NQPDCKL++IANFGNGVDNIDV AAHARGITVTNTPKVLTEDTADMTMALILAV Sbjct: 61 ITADIVNQPDCKLRLIANFGNGVDNIDVEAAHARGITVTNTPKVLTEDTADMTMALILAV 120 Query: 121 PRRLIEGASILTEGKQHWAGWSPTWMLGHRIGGKRLGIVGMGRIGQAVARRARAFGLQIH 180 PRR+IEGASILTEGK W GWSPTWMLGHRIGGKRLGI+GMGRIGQAVARRARAFGLQIH Sbjct: 121 PRRMIEGASILTEGKP-WPGWSPTWMLGHRIGGKRLGIIGMGRIGQAVARRARAFGLQIH 179 Query: 181 YHNRRPVAPMIAEELGATYWESLDQMLARMDIISVNCPHTPATYHLLSARRLKLIRKEAY 240 YHNRRPVAP IAEELGATYWESLDQMLARMDI+SVNCPHTPATYHLLSARRLKLIRK+AY Sbjct: 180 YHNRRPVAPKIAEELGATYWESLDQMLARMDILSVNCPHTPATYHLLSARRLKLIRKDAY 239 Query: 241 VVNTARGEVIDEDMLIKLIEAGDIGGAALDVYEHEPAVNPKLVRLARAGKVTLLPHMGSA 300 +VNTARGEV DED LIKLIE G+IGGA LDVYEHEPAVNPKLVRLA+AGKVTLLPHMGSA Sbjct: 240 IVNTARGEVTDEDTLIKLIEGGEIGGAGLDVYEHEPAVNPKLVRLAKAGKVTLLPHMGSA 299 Query: 301 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML 334 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML Sbjct: 300 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML 333 >ref|YP_001236280.1| putative glyoxylate reductase [Bradyrhizobium sp. BTAi1] gb|ABQ32374.1| putative Glyoxylate reductase [Bradyrhizobium sp. BTAi1] Length = 333 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 293/334 (87%), Positives = 320/334 (95%), Gaps = 1/334 (0%) Query: 1 MSVKKKPLVVVTRKLPDSIETRMRELFNARLNLDDTPMTPEQIAEAARTADVLVPTVTDM 60 MS +KKPLVVVTRKLPDS+ETRMRELF+ARLNLDD PM+ +Q+A+A RTA+VLVPTVTD Sbjct: 1 MSARKKPLVVVTRKLPDSVETRMRELFDARLNLDDEPMSQDQLADAVRTAEVLVPTVTDH 60 Query: 61 IREDVINQPDCKLKMIANFGNGVDNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 I D++NQPDCKL+MIANFGNGVDNIDVAAA ARGITVTNTPKVLTEDTADMTMALILAV Sbjct: 61 ISADILNQPDCKLRMIANFGNGVDNIDVAAAVARGITVTNTPKVLTEDTADMTMALILAV 120 Query: 121 PRRLIEGASILTEGKQHWAGWSPTWMLGHRIGGKRLGIVGMGRIGQAVARRARAFGLQIH 180 PRRLIEGASILTEGK +WAGWSPTWMLGHRIGGKRLGI+GMGRIGQAVARRARAFGLQIH Sbjct: 121 PRRLIEGASILTEGK-NWAGWSPTWMLGHRIGGKRLGIIGMGRIGQAVARRARAFGLQIH 179 Query: 181 YHNRRPVAPMIAEELGATYWESLDQMLARMDIISVNCPHTPATYHLLSARRLKLIRKEAY 240 YHNRRPVAP+IA+ELGATYWESLDQMLARMDIISVNCPHTPAT+HLLSARRLKLIRK+AY Sbjct: 180 YHNRRPVAPVIADELGATYWESLDQMLARMDIISVNCPHTPATFHLLSARRLKLIRKDAY 239 Query: 241 VVNTARGEVIDEDMLIKLIEAGDIGGAALDVYEHEPAVNPKLVRLARAGKVTLLPHMGSA 300 +VNTARGEVIDE+ + +LIEAGDI GA LDV+EHEPAVNP+LVRLA++GKVTLLPHMGSA Sbjct: 240 IVNTARGEVIDEETMTRLIEAGDIAGAGLDVFEHEPAVNPRLVRLAKSGKVTLLPHMGSA 299 Query: 301 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML 334 TIEGRVEMGEKVIINI+TFLD H+PPDRVLPSML Sbjct: 300 TIEGRVEMGEKVIINIKTFLDNHRPPDRVLPSML 333 >ref|YP_779183.1| glyoxylate reductase [Rhodopseudomonas palustris BisA53] gb|ABJ04203.1| Glyoxylate reductase [Rhodopseudomonas palustris BisA53] Length = 333 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 290/334 (86%), Positives = 312/334 (93%), Gaps = 1/334 (0%) Query: 1 MSVKKKPLVVVTRKLPDSIETRMRELFNARLNLDDTPMTPEQIAEAARTADVLVPTVTDM 60 MSVKKKPLVVVTRKLPDSIETRMRELF+ RLNLDD PMTP+Q+AEAARTADVLVPTVTD Sbjct: 1 MSVKKKPLVVVTRKLPDSIETRMRELFDTRLNLDDVPMTPDQLAEAARTADVLVPTVTDQ 60 Query: 61 IREDVINQPDCKLKMIANFGNGVDNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 I ED++ QPDCKLK+IA+FGNGVDNI+VAAAHARGITVTNTPKVLTEDTADMTMALILAV Sbjct: 61 ITEDLLKQPDCKLKLIAHFGNGVDNINVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 Query: 121 PRRLIEGASILTEGKQHWAGWSPTWMLGHRIGGKRLGIVGMGRIGQAVARRARAFGLQIH 180 PRRLIEGAS+L +G Q W GWSPTWMLG R+GGKRLGI+GMGRIGQAVARRAR FGLQIH Sbjct: 121 PRRLIEGASLLPDG-QDWPGWSPTWMLGRRLGGKRLGIIGMGRIGQAVARRARTFGLQIH 179 Query: 181 YHNRRPVAPMIAEELGATYWESLDQMLARMDIISVNCPHTPATYHLLSARRLKLIRKEAY 240 YHNR+PV P IA+ELGATYW+SLDQML RMDIIS+NCPHTPATYHLLSARRLKLIRKEAY Sbjct: 180 YHNRKPVPPKIADELGATYWDSLDQMLTRMDIISINCPHTPATYHLLSARRLKLIRKEAY 239 Query: 241 VVNTARGEVIDEDMLIKLIEAGDIGGAALDVYEHEPAVNPKLVRLARAGKVTLLPHMGSA 300 +VNTARGEVIDE+ L KLIEAGDI GA LDV+EHEPAVNPKL+RLA+ GKV L PHMGSA Sbjct: 240 LVNTARGEVIDEETLTKLIEAGDIAGAGLDVFEHEPAVNPKLIRLAKQGKVVLTPHMGSA 299 Query: 301 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML 334 TIEGRVEMGEKVIINIRTFLD HKPPDRVLP+ML Sbjct: 300 TIEGRVEMGEKVIINIRTFLDNHKPPDRVLPNML 333 >ref|YP_484238.1| glycolate reductase [Rhodopseudomonas palustris HaA2] gb|ABD05327.1| Glycolate reductase [Rhodopseudomonas palustris HaA2] Length = 333 Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust. Identities = 288/334 (86%), Positives = 316/334 (94%), Gaps = 1/334 (0%) Query: 1 MSVKKKPLVVVTRKLPDSIETRMRELFNARLNLDDTPMTPEQIAEAARTADVLVPTVTDM 60 MSVKKKPLVVVTRKLPDSIETRMRELF+ARLNLDD PM+ EQ+A+AARTADVLVPTVTD Sbjct: 1 MSVKKKPLVVVTRKLPDSIETRMRELFDARLNLDDAPMSAEQLADAARTADVLVPTVTDS 60 Query: 61 IREDVINQPDCKLKMIANFGNGVDNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 I +++NQPDCKL++IANFGNG+DNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV Sbjct: 61 ITSEMLNQPDCKLRLIANFGNGIDNIDVAAAHARGITVTNTPKVLTEDTADMTMALILAV 120 Query: 121 PRRLIEGASILTEGKQHWAGWSPTWMLGHRIGGKRLGIVGMGRIGQAVARRARAFGLQIH 180 PRRLIEGA++LT+G + W GWSPTWMLG R+GGKRLGI+GMGRIGQAVARRARAFGLQIH Sbjct: 121 PRRLIEGAALLTDGGE-WPGWSPTWMLGRRLGGKRLGIIGMGRIGQAVARRARAFGLQIH 179 Query: 181 YHNRRPVAPMIAEELGATYWESLDQMLARMDIISVNCPHTPATYHLLSARRLKLIRKEAY 240 YHNR+PVAP IA+ELGATYW+SLDQMLARMDIISVNCPHTPAT+HLLSARRLKL+RK+A+ Sbjct: 180 YHNRKPVAPRIADELGATYWDSLDQMLARMDIISVNCPHTPATFHLLSARRLKLVRKDAF 239 Query: 241 VVNTARGEVIDEDMLIKLIEAGDIGGAALDVYEHEPAVNPKLVRLARAGKVTLLPHMGSA 300 +VNTARGEVIDE+ L +LIE+GDI GA LDVYEHEPAVNPKLVRLA+ GKV LLPHMGSA Sbjct: 240 IVNTARGEVIDEETLTRLIESGDIAGAGLDVYEHEPAVNPKLVRLAKHGKVVLLPHMGSA 299 Query: 301 TIEGRVEMGEKVIINIRTFLDAHKPPDRVLPSML 334 TIEGRVEMGEKVIINIRTFLD HKPPDRVLP ML Sbjct: 300 TIEGRVEMGEKVIINIRTFLDNHKPPDRVLPGML 333