BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0054.0007.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_530258.1| UBA/THIF-type NAD/FAD binding domain-containing... 449 e-124 ref|YP_779182.1| UBA/THIF-type NAD/FAD binding protein [Rhodopse... 449 e-124 ref|NP_767405.1| molybdopterin biosynthesis protein [Bradyrhizob... 447 e-124 ref|YP_316658.1| UBA/THIF-type NAD/FAD binding fold [Nitrobacter... 446 e-123 ref|YP_567356.1| UBA/THIF-type NAD/FAD binding domain-containing... 444 e-123 >ref|YP_530258.1| UBA/THIF-type NAD/FAD binding domain-containing protein [Rhodopseudomonas palustris BisB18] gb|ABD85939.1| UBA/THIF-type NAD/FAD binding fold [Rhodopseudomonas palustris BisB18] Length = 266 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/265 (83%), Positives = 234/265 (88%) Query: 1 MLSADELERYARHIVLREVGGPGQNALKQASVLVIGAGGLGAPVLMYLAAAGVGRLGVID 60 MLS DELERYARHIVLREVGGPGQ L+ ASVLVIGAGGLGAP LMYLAAAGVG LGV+D Sbjct: 1 MLSGDELERYARHIVLREVGGPGQAKLQAASVLVIGAGGLGAPSLMYLAAAGVGTLGVVD 60 Query: 61 DDIVSLSNLQRQIIHATSDIGKRKVDSAAAQIHALNPHVTFEAHPMRLTADNAMALIARY 120 DD VSLSNLQRQIIHAT DIG+ KVDSA +I ALNPHV F HPMR+ ADNAM LI Y Sbjct: 61 DDTVSLSNLQRQIIHATPDIGRSKVDSAEDRITALNPHVRFVRHPMRIDADNAMQLIGSY 120 Query: 121 DLVLDGSDNFETRYLVADACFLAKRPLITAALGQFDGSLTTIRAHEKNADGVFNPTYRCL 180 D+VLDGSDNF TRYLV+DAC+LA++PLIT ALG FDGSLTTIRAHEKNADG NPTYRCL Sbjct: 121 DMVLDGSDNFATRYLVSDACYLARKPLITGALGVFDGSLTTIRAHEKNADGELNPTYRCL 180 Query: 181 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFGEGLVGRLLMVDARAMRFE 240 FPEAPPPGTVP+C EAGV+GALAGVLGSMMALEAIREIVGFGEGLVGRLLM+DARAMRFE Sbjct: 181 FPEAPPPGTVPSCQEAGVLGALAGVLGSMMALEAIREIVGFGEGLVGRLLMIDARAMRFE 240 Query: 241 TLRYTRDPQNPLNGDAPGITDLSGH 265 TLRY RDP NPLNGD P I DLS H Sbjct: 241 TLRYNRDPANPLNGDRPSILDLSAH 265 >ref|YP_779182.1| UBA/THIF-type NAD/FAD binding protein [Rhodopseudomonas palustris BisA53] gb|ABJ04202.1| UBA/THIF-type NAD/FAD binding protein [Rhodopseudomonas palustris BisA53] Length = 266 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 220/266 (82%), Positives = 240/266 (90%) Query: 1 MLSADELERYARHIVLREVGGPGQNALKQASVLVIGAGGLGAPVLMYLAAAGVGRLGVID 60 MLSA ELERYARHIVLR+VGGPGQ L+ ASVLVIGAGGLGAPVLMYLAAAG+GRLGV+D Sbjct: 1 MLSAIELERYARHIVLRDVGGPGQMKLQAASVLVIGAGGLGAPVLMYLAAAGIGRLGVVD 60 Query: 61 DDIVSLSNLQRQIIHATSDIGKRKVDSAAAQIHALNPHVTFEAHPMRLTADNAMALIARY 120 DDIVSLSNLQRQIIHAT DI + KVDSAA +IHALNPHV F H RL ADNA+ LI Y Sbjct: 61 DDIVSLSNLQRQIIHATPDIDRLKVDSAAERIHALNPHVAFVPHAERLEADNALHLIGGY 120 Query: 121 DLVLDGSDNFETRYLVADACFLAKRPLITAALGQFDGSLTTIRAHEKNADGVFNPTYRCL 180 DLV+DGSDNF TRYLV+DAC+LA +PLIT ALG FDGSLTTIRAHE+NADG FNP+YRCL Sbjct: 121 DLVIDGSDNFATRYLVSDACYLAAKPLITGALGAFDGSLTTIRAHERNADGDFNPSYRCL 180 Query: 181 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFGEGLVGRLLMVDARAMRFE 240 FPEAPPPGTVP+C EAGV+GALAG++GSMMALEAIREIVGFGEGLVGRLLM+DARAMRFE Sbjct: 181 FPEAPPPGTVPSCQEAGVLGALAGIIGSMMALEAIREIVGFGEGLVGRLLMIDARAMRFE 240 Query: 241 TLRYTRDPQNPLNGDAPGITDLSGHR 266 TLRY RDP NPLNGDAP I+DLSG+R Sbjct: 241 TLRYKRDPHNPLNGDAPTISDLSGYR 266 >ref|NP_767405.1| molybdopterin biosynthesis protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46030.1| molybdopterin biosynthesis protein [Bradyrhizobium japonicum USDA 110] Length = 267 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 219/266 (82%), Positives = 236/266 (88%) Query: 1 MLSADELERYARHIVLREVGGPGQNALKQASVLVIGAGGLGAPVLMYLAAAGVGRLGVID 60 MLS DELERYARHIVLR+VGGPGQ ALK+ASVLVIGAGGLGAP LMYLAAAG+G LGV+D Sbjct: 1 MLSPDELERYARHIVLRDVGGPGQAALKRASVLVIGAGGLGAPALMYLAAAGIGTLGVVD 60 Query: 61 DDIVSLSNLQRQIIHATSDIGKRKVDSAAAQIHALNPHVTFEAHPMRLTADNAMALIARY 120 DD+VSLSNLQRQ+IH T DIG+ K++SAA +I ALNPHV F H L ADNA++LI Y Sbjct: 61 DDVVSLSNLQRQVIHTTPDIGRHKIESAAERISALNPHVRFVGHATWLNADNALSLIGDY 120 Query: 121 DLVLDGSDNFETRYLVADACFLAKRPLITAALGQFDGSLTTIRAHEKNADGVFNPTYRCL 180 DLVLDGSDNF TRYLV+DACF AK+PLITAALG FDGSLTTIRAHEKN G FNPTYRCL Sbjct: 121 DLVLDGSDNFSTRYLVSDACFFAKKPLITAALGTFDGSLTTIRAHEKNEAGEFNPTYRCL 180 Query: 181 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFGEGLVGRLLMVDARAMRFE 240 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFG+GLVGRLLM+DARAMRFE Sbjct: 181 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFGDGLVGRLLMIDARAMRFE 240 Query: 241 TLRYTRDPQNPLNGDAPGITDLSGHR 266 TLRY+RDP NPLNGD P DLS HR Sbjct: 241 TLRYSRDPANPLNGDGPVFDDLSIHR 266 >ref|YP_316658.1| UBA/THIF-type NAD/FAD binding fold [Nitrobacter winogradskyi Nb-255] gb|ABA03306.1| UBA/THIF-type NAD/FAD binding fold protein [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 219/265 (82%), Positives = 237/265 (89%) Query: 1 MLSADELERYARHIVLREVGGPGQNALKQASVLVIGAGGLGAPVLMYLAAAGVGRLGVID 60 MLSADELERY+RHIV+REVGGPGQNAL+ A VL+IGAGGLGAP LMYLAAAGVG LGVID Sbjct: 13 MLSADELERYSRHIVMREVGGPGQNALRNARVLMIGAGGLGAPALMYLAAAGVGTLGVID 72 Query: 61 DDIVSLSNLQRQIIHATSDIGKRKVDSAAAQIHALNPHVTFEAHPMRLTADNAMALIARY 120 DD+V+LSNLQRQIIHAT DIG KV+SAA +I ALNPHV F AH MRL A NAMAL+A Y Sbjct: 73 DDVVTLSNLQRQIIHATPDIGSPKVESAADKIRALNPHVAFRAHHMRLDASNAMALLADY 132 Query: 121 DLVLDGSDNFETRYLVADACFLAKRPLITAALGQFDGSLTTIRAHEKNADGVFNPTYRCL 180 D+V +GSDNF TRYLVADACFLAK+PL+TAALG FDGSLTTIRAHEKNADGVFNPTYRCL Sbjct: 133 DIVAEGSDNFATRYLVADACFLAKKPLVTAALGVFDGSLTTIRAHEKNADGVFNPTYRCL 192 Query: 181 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFGEGLVGRLLMVDARAMRFE 240 FPE PP GTVP+C +AG++GALAGVLGSM ALE IREIVGFGEGLVGRLLMVDARAMRFE Sbjct: 193 FPEPPPEGTVPSCQQAGILGALAGVLGSMTALEVIREIVGFGEGLVGRLLMVDARAMRFE 252 Query: 241 TLRYTRDPQNPLNGDAPGITDLSGH 265 TL Y RDP NPLNGD P ITDLSG+ Sbjct: 253 TLNYRRDPSNPLNGDHPTITDLSGY 277 >ref|YP_567356.1| UBA/THIF-type NAD/FAD binding domain-containing protein [Rhodopseudomonas palustris BisB5] gb|ABE37455.1| UBA/THIF-type NAD/FAD binding fold [Rhodopseudomonas palustris BisB5] Length = 266 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 220/265 (83%), Positives = 238/265 (89%) Query: 1 MLSADELERYARHIVLREVGGPGQNALKQASVLVIGAGGLGAPVLMYLAAAGVGRLGVID 60 MLSADELERYARHIVLREVGGPGQ AL++A VLV+GAGGLGAPVLMYLAAAG+G L ++D Sbjct: 1 MLSADELERYARHIVLREVGGPGQAALRRARVLVVGAGGLGAPVLMYLAAAGIGTLDIVD 60 Query: 61 DDIVSLSNLQRQIIHATSDIGKRKVDSAAAQIHALNPHVTFEAHPMRLTADNAMALIARY 120 +D VSLSNLQRQ+IHAT DIGKRKVDSAAA+I ALNPHV H +RLT NA+ LI Sbjct: 61 NDEVSLSNLQRQVIHATPDIGKRKVDSAAARIKALNPHVEVRPHALRLTPANALDLIDGC 120 Query: 121 DLVLDGSDNFETRYLVADACFLAKRPLITAALGQFDGSLTTIRAHEKNADGVFNPTYRCL 180 DLVLDGSDNF TRYLV+DACF+A+ PLITAALG FDGSLTTIRAHEKN G FNPTYRCL Sbjct: 121 DLVLDGSDNFATRYLVSDACFIARTPLITAALGPFDGSLTTIRAHEKNPAGEFNPTYRCL 180 Query: 181 FPEAPPPGTVPACAEAGVMGALAGVLGSMMALEAIREIVGFGEGLVGRLLMVDARAMRFE 240 FPEAPPPGTVPAC EAGVMGALAG+LGSMMALEAIREIVGFGEGLVGRLLM+DARAMRFE Sbjct: 181 FPEAPPPGTVPACEEAGVMGALAGMLGSMMALEAIREIVGFGEGLVGRLLMIDARAMRFE 240 Query: 241 TLRYTRDPQNPLNGDAPGITDLSGH 265 TLRY+RDP NPLNGDAP +TDLSGH Sbjct: 241 TLRYSRDPANPLNGDAPRVTDLSGH 265