BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0042.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771551.1| NADH dehydrogenase subunit G [Bradyrhizobium ja... 375 e-102 ref|ZP_08629631.1| NADH-ubiquinone oxidoreductase chain G [Brady... 366 3e-99 ref|YP_001240492.1| NADH dehydrogenase subunit G [Bradyrhizobium... 360 2e-97 ref|YP_004108881.1| NADH-quinone oxidoreductase subunit G [Rhodo... 359 3e-97 ref|YP_486194.1| NADH dehydrogenase subunit G [Rhodopseudomonas ... 357 1e-96 >ref|NP_771551.1| NADH dehydrogenase subunit G [Bradyrhizobium japonicum USDA 110] dbj|BAC50176.1| NADH ubiquinone oxidoreductase chain G [Bradyrhizobium japonicum USDA 110] Length = 691 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/219 (83%), Positives = 198/219 (90%) Query: 61 VDVGALKDGWNGFAVLQDTASRAGALDIGFSPAAGGLTSAQMTTFGTLDVLFLLGADEIK 120 +DVGA+KDGWNGF VL +TASR GALDIGFS AAGGL +AQMTTFGTLD+LFLLGADEIK Sbjct: 473 MDVGAVKDGWNGFGVLHETASRVGALDIGFSAAAGGLNAAQMTTFGTLDLLFLLGADEIK 532 Query: 121 APDGTFVVYIGTHGDQGAHRADVILPGAAYTEKSGIYVNTEGRAQIANRAAFPPGEARED 180 APDGTFVVYIGTHGD+GAHRADVILP AAYTEKS IYVNTEGR Q+ RAAFPPGEARED Sbjct: 533 APDGTFVVYIGTHGDRGAHRADVILPAAAYTEKSAIYVNTEGRVQMTGRAAFPPGEARED 592 Query: 181 WAIIRALSDVLGKKLPFDSLQALRQAMFKAYPHLMRLDQIEAGKPDDVKALAGKGGSVDK 240 WAI+RALS+ LGKKL +DSL ALRQA+FKA PHL+RLDQIEAG D +K LAGKGGS +K Sbjct: 593 WAIVRALSEALGKKLGYDSLAALRQAIFKAVPHLIRLDQIEAGSADQIKRLAGKGGSPEK 652 Query: 241 AAFKPTVEDFYLTNPIARASAVMAECSRLASGRMLTAAE 279 A FKP V+DFYLTNPIARASAVMAECSRLASG+MLTAAE Sbjct: 653 APFKPLVDDFYLTNPIARASAVMAECSRLASGQMLTAAE 691 >ref|ZP_08629631.1| NADH-ubiquinone oxidoreductase chain G [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08124.1| NADH-ubiquinone oxidoreductase chain G [Bradyrhizobiaceae bacterium SG-6C] Length = 692 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 177/218 (81%), Positives = 193/218 (88%) Query: 62 DVGALKDGWNGFAVLQDTASRAGALDIGFSPAAGGLTSAQMTTFGTLDVLFLLGADEIKA 121 D GA+KDGWNGFAVLQ AS+ GALDIGF+P AG LT AQM+TFGTLDVLF LGADE+ Sbjct: 475 DFGAVKDGWNGFAVLQKAASQVGALDIGFAPGAGTLTVAQMSTFGTLDVLFSLGADEVSP 534 Query: 122 PDGTFVVYIGTHGDQGAHRADVILPGAAYTEKSGIYVNTEGRAQIANRAAFPPGEAREDW 181 DGTFVVYIGTHGD+GAHRADVILPGAAYTEK+GIYVNTEGR Q+ANRAAFPPG+AREDW Sbjct: 535 ADGTFVVYIGTHGDKGAHRADVILPGAAYTEKTGIYVNTEGRVQMANRAAFPPGDAREDW 594 Query: 182 AIIRALSDVLGKKLPFDSLQALRQAMFKAYPHLMRLDQIEAGKPDDVKALAGKGGSVDKA 241 AIIRALS+ +GKKLPFDSL LRQA+FKA PHLMR+DQIEAG V ALA +GGSV+K Sbjct: 595 AIIRALSEAVGKKLPFDSLAQLRQALFKAVPHLMRIDQIEAGDAAGVTALAARGGSVEKG 654 Query: 242 AFKPTVEDFYLTNPIARASAVMAECSRLASGRMLTAAE 279 AFK +EDFYLTNPIARASAVMAECSRLASGRMLTAAE Sbjct: 655 AFKSPIEDFYLTNPIARASAVMAECSRLASGRMLTAAE 692 >ref|YP_001240492.1| NADH dehydrogenase subunit G [Bradyrhizobium sp. BTAi1] gb|ABQ36586.1| NADH dehydrogenase subunit G [Bradyrhizobium sp. BTAi1] Length = 689 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 173/228 (75%), Positives = 198/228 (86%), Gaps = 2/228 (0%) Query: 52 VLAQAAKLAVDVGALKDGWNGFAVLQDTASRAGALDIGFSPAAGGLTSAQMTTFGTLDVL 111 +L+ AAK+A+DV A++D WNGFAVL DTASR GALDIGF+ GLT AQMTTFGT+DV+ Sbjct: 464 ILSLAAKIAMDVNAVRDDWNGFAVLHDTASRVGALDIGFN--GTGLTGAQMTTFGTMDVM 521 Query: 112 FLLGADEIKAPDGTFVVYIGTHGDQGAHRADVILPGAAYTEKSGIYVNTEGRAQIANRAA 171 FLLGADE++ P+G F VYIGTHGD+GAHRADVILPGAAYTEKSG+YVNTEGR Q+ RA+ Sbjct: 522 FLLGADEVEVPEGVFTVYIGTHGDRGAHRADVILPGAAYTEKSGLYVNTEGRVQVTGRAS 581 Query: 172 FPPGEAREDWAIIRALSDVLGKKLPFDSLQALRQAMFKAYPHLMRLDQIEAGKPDDVKAL 231 FPPGEAREDWAIIRALSDVLG+KL +DSL ALR + K PHL R+DQIE GK D+K L Sbjct: 582 FPPGEAREDWAIIRALSDVLGRKLGYDSLAALRAEIVKVAPHLGRIDQIEVGKIADIKTL 641 Query: 232 AGKGGSVDKAAFKPTVEDFYLTNPIARASAVMAECSRLASGRMLTAAE 279 AGKGGS++KA FKP +EDFYLTNPIARASAVMAECSRLASG+MLTAAE Sbjct: 642 AGKGGSLEKAPFKPLIEDFYLTNPIARASAVMAECSRLASGQMLTAAE 689 >ref|YP_004108881.1| NADH-quinone oxidoreductase subunit G [Rhodopseudomonas palustris DX-1] gb|ADU44148.1| NADH-quinone oxidoreductase, chain G [Rhodopseudomonas palustris DX-1] Length = 691 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 173/228 (75%), Positives = 195/228 (85%) Query: 52 VLAQAAKLAVDVGALKDGWNGFAVLQDTASRAGALDIGFSPAAGGLTSAQMTTFGTLDVL 111 +L+ AAKLA DVGAL DGWNGFAVL AS GALDIGF P AGGL +A+M T G +DVL Sbjct: 464 ILSLAAKLAADVGALDDGWNGFAVLHPAASSVGALDIGFVPGAGGLGAAEMATAGGVDVL 523 Query: 112 FLLGADEIKAPDGTFVVYIGTHGDQGAHRADVILPGAAYTEKSGIYVNTEGRAQIANRAA 171 F LGADE+K PDG FVVYIGTHGD+GAHRADVILPGAAYTEKSGIYVNTEGR QIANRA+ Sbjct: 524 FSLGADEVKVPDGAFVVYIGTHGDRGAHRADVILPGAAYTEKSGIYVNTEGRVQIANRAS 583 Query: 172 FPPGEAREDWAIIRALSDVLGKKLPFDSLQALRQAMFKAYPHLMRLDQIEAGKPDDVKAL 231 FPPG+AREDWAI+RALS+ LG KLP+DSL ALR+A+F PHLMR+DQIEAG P D++ L Sbjct: 584 FPPGDAREDWAILRALSEALGAKLPYDSLAALRKALFAEVPHLMRIDQIEAGDPADLRKL 643 Query: 232 AGKGGSVDKAAFKPTVEDFYLTNPIARASAVMAECSRLASGRMLTAAE 279 A GGSV+K FKP + DFY+TNPIARASAVMAECSRLASG++LTAAE Sbjct: 644 ASAGGSVEKTPFKPVIADFYMTNPIARASAVMAECSRLASGQLLTAAE 691 >ref|YP_486194.1| NADH dehydrogenase subunit G [Rhodopseudomonas palustris HaA2] gb|ABD07283.1| NADH-quinone oxidoreductase, chain G [Rhodopseudomonas palustris HaA2] Length = 691 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 173/219 (78%), Positives = 189/219 (86%) Query: 61 VDVGALKDGWNGFAVLQDTASRAGALDIGFSPAAGGLTSAQMTTFGTLDVLFLLGADEIK 120 VD+GAL DGWNGFAVL AS GALDIGF P AGG+ +AQMTT G LDV+F LGADE+K Sbjct: 473 VDIGALADGWNGFAVLHPAASSVGALDIGFVPGAGGIDAAQMTTAGALDVVFALGADEVK 532 Query: 121 APDGTFVVYIGTHGDQGAHRADVILPGAAYTEKSGIYVNTEGRAQIANRAAFPPGEARED 180 PDG FVVYIGTHGD+GAHRADVILPGAAYTEKSGIYVNTEGR QIANRAAFPPG+ARED Sbjct: 533 LPDGAFVVYIGTHGDRGAHRADVILPGAAYTEKSGIYVNTEGRVQIANRAAFPPGDARED 592 Query: 181 WAIIRALSDVLGKKLPFDSLQALRQAMFKAYPHLMRLDQIEAGKPDDVKALAGKGGSVDK 240 WAIIRALS+ LG KLPFDSL +LR+A+F A PHLMR+DQIEAG V+ALA GGSVDK Sbjct: 593 WAIIRALSEALGHKLPFDSLASLRKAIFAAVPHLMRVDQIEAGDAGAVRALAASGGSVDK 652 Query: 241 AAFKPTVEDFYLTNPIARASAVMAECSRLASGRMLTAAE 279 A KP + DFY+TNPIARASAVMAECSRLASG+MLTAAE Sbjct: 653 APIKPAIADFYMTNPIARASAVMAECSRLASGQMLTAAE 691