BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0041.p (457 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240492.1| NADH dehydrogenase subunit G [Bradyrhizobium... 847 0.0 ref|YP_577466.1| NADH dehydrogenase subunit G [Nitrobacter hambu... 846 0.0 ref|YP_001206155.1| NADH dehydrogenase subunit G [Bradyrhizobium... 843 0.0 ref|NP_771551.1| NADH dehydrogenase subunit G [Bradyrhizobium ja... 834 0.0 ref|YP_318493.1| NADH dehydrogenase subunit G [Nitrobacter winog... 832 0.0 >ref|YP_001240492.1| NADH dehydrogenase subunit G [Bradyrhizobium sp. BTAi1] gb|ABQ36586.1| NADH dehydrogenase subunit G [Bradyrhizobium sp. BTAi1] Length = 689 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/454 (88%), Positives = 432/454 (95%) Query: 1 MSKIIVDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 M+KII+DGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA Sbjct: 1 MTKIIIDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 Query: 61 SCAWAVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 SCAW VRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ Sbjct: 61 SCAWGVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 Query: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEVCGAPEMGATGRGE 180 AMGYGVDTSR+AENKRAVEDKYLGALVKTSM RCIQCTRCVRFSAEVCG PEMGA GRGE Sbjct: 121 AMGYGVDTSRYAENKRAVEDKYLGALVKTSMTRCIQCTRCVRFSAEVCGVPEMGAIGRGE 180 Query: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSVDVMDGVGSAIR 240 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQS+DVMDG+GSAIR Sbjct: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSIDVMDGLGSAIR 240 Query: 241 VDTRGREVMRILPRINEAVNEEWISDKTRHVVDGLRTQRLDRPYVRENGQLRPATWQEAF 300 VDTRGREVMRILPRIN+AVNEEWISDKTRHVVDGLRTQRLDRPYVRE+G+LRPATW EAF Sbjct: 241 VDTRGREVMRILPRINDAVNEEWISDKTRHVVDGLRTQRLDRPYVREDGKLRPATWPEAF 300 Query: 301 AAIAAKAGRSDGKRIGAIAGDLAAVDEMYALKELLAKFGSVNLAVQGGDAFDAKAGRGSY 360 AIAAK R DGKRIGAIAGDLAAV+EM+ALK+LLAK GS N+AVQGGD+FDAK GR SY Sbjct: 301 KAIAAKLSRIDGKRIGAIAGDLAAVEEMFALKDLLAKLGSSNVAVQGGDSFDAKLGRASY 360 Query: 361 IFNPTIAGIDQADAILIVGSHPRKEAAVLNARIRKRWRTGGLKVGMIGAKADFTYDHDYL 420 +FNPTIAGI+QADAILIVG++PRKEAAVLNARIRKRWR+G LKVG++G KAD TY ++++ Sbjct: 361 LFNPTIAGIEQADAILIVGANPRKEAAVLNARIRKRWRSGQLKVGLVGPKADLTYPYEHI 420 Query: 421 GAGTDTLADLVAGKHSFADVLKKAQHPIILVGAG 454 GAGTD+L+D+ AGKHSFA + A++PI+LVG+G Sbjct: 421 GAGTDSLSDVAAGKHSFATTFRNAKNPIVLVGSG 454 >ref|YP_577466.1| NADH dehydrogenase subunit G [Nitrobacter hamburgensis X14] gb|ABE63006.1| NADH dehydrogenase subunit G [Nitrobacter hamburgensis X14] Length = 691 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/457 (87%), Positives = 430/457 (94%) Query: 1 MSKIIVDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 M+K+I+DGKEIDVP EYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA Sbjct: 1 MTKLIIDGKEIDVPAEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 Query: 61 SCAWAVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 SCAW VRDCRPGP GEPP+ISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ Sbjct: 61 SCAWGVRDCRPGPNGEPPQISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 Query: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEVCGAPEMGATGRGE 180 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAE+CGAPEMGATGRGE Sbjct: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEICGAPEMGATGRGE 180 Query: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSVDVMDGVGSAIR 240 DMEITTYLE AL+SELQGNLVDICPVGALTSKPYAFAARPWELGKTQS+DVMD VGSAIR Sbjct: 181 DMEITTYLESALTSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSIDVMDAVGSAIR 240 Query: 241 VDTRGREVMRILPRINEAVNEEWISDKTRHVVDGLRTQRLDRPYVRENGQLRPATWQEAF 300 VDTRGREVMRILPR+NEAVNEEWISDKTRH+VDGLRTQRLDRPY+RENG LR A+W EAF Sbjct: 241 VDTRGREVMRILPRVNEAVNEEWISDKTRHIVDGLRTQRLDRPYIRENGALRVASWPEAF 300 Query: 301 AAIAAKAGRSDGKRIGAIAGDLAAVDEMYALKELLAKFGSVNLAVQGGDAFDAKAGRGSY 360 AAIAAK R+DGKRIGAIAGDLAAV+EM+ALK+LL+K GSVN+AVQGGDAF+ GR SY Sbjct: 301 AAIAAKVTRADGKRIGAIAGDLAAVEEMFALKDLLSKLGSVNIAVQGGDAFNPALGRASY 360 Query: 361 IFNPTIAGIDQADAILIVGSHPRKEAAVLNARIRKRWRTGGLKVGMIGAKADFTYDHDYL 420 IFNPTIAGI+QADA+LIVGS+PRKEAA+LNARIRKRWRTG LK+G+IG +AD TYDHDYL Sbjct: 361 IFNPTIAGIEQADALLIVGSNPRKEAAILNARIRKRWRTGQLKIGVIGERADLTYDHDYL 420 Query: 421 GAGTDTLADLVAGKHSFADVLKKAQHPIILVGAGXPT 457 GAG D+LADL AGK+ F VLK A +PI+LVGAG + Sbjct: 421 GAGADSLADLAAGKNGFLGVLKGANNPIVLVGAGATS 457 >ref|YP_001206155.1| NADH dehydrogenase subunit G [Bradyrhizobium sp. ORS 278] emb|CAL77930.1| NADH-quinone oxidoreductase chain G (NADH dehydrogenase I, chain G) (NDH-1, chain G) [Bradyrhizobium sp. ORS 278] Length = 689 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/454 (87%), Positives = 432/454 (95%) Query: 1 MSKIIVDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 M+KII+DGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA Sbjct: 1 MTKIIIDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 Query: 61 SCAWAVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 SCAW VRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ Sbjct: 61 SCAWGVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 Query: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEVCGAPEMGATGRGE 180 AMGYGVDTSR+AENKRAVEDKYLGALVKTSM RCIQCTRCVRFSAEVCG PEMGATGRGE Sbjct: 121 AMGYGVDTSRYAENKRAVEDKYLGALVKTSMTRCIQCTRCVRFSAEVCGVPEMGATGRGE 180 Query: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSVDVMDGVGSAIR 240 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAF+ARPWELGKTQS+DVMDG+GSAIR Sbjct: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFSARPWELGKTQSIDVMDGLGSAIR 240 Query: 241 VDTRGREVMRILPRINEAVNEEWISDKTRHVVDGLRTQRLDRPYVRENGQLRPATWQEAF 300 VDTRGREVMRILPRIN+AVNEEWISDKTRHVVDGLRTQRLDRPYVRE+G+LRPA+W EAF Sbjct: 241 VDTRGREVMRILPRINDAVNEEWISDKTRHVVDGLRTQRLDRPYVREDGKLRPASWPEAF 300 Query: 301 AAIAAKAGRSDGKRIGAIAGDLAAVDEMYALKELLAKFGSVNLAVQGGDAFDAKAGRGSY 360 AIAAK R DGKR+GAIAGDLAAV+EM+ALK+LLAK GS N+AVQGGD+FDA+ GR SY Sbjct: 301 KAIAAKLSRIDGKRVGAIAGDLAAVEEMFALKDLLAKLGSTNVAVQGGDSFDARLGRASY 360 Query: 361 IFNPTIAGIDQADAILIVGSHPRKEAAVLNARIRKRWRTGGLKVGMIGAKADFTYDHDYL 420 +FNPTIAGI+QADAILI+G++PRKEAAVLNARIRKRWR+G LKVG++G K D TY ++++ Sbjct: 361 LFNPTIAGIEQADAILIIGANPRKEAAVLNARIRKRWRSGQLKVGLVGPKVDLTYAYEHI 420 Query: 421 GAGTDTLADLVAGKHSFADVLKKAQHPIILVGAG 454 GAGTD+L+D+ AGKHSFA + A++PI+LVGAG Sbjct: 421 GAGTDSLSDVAAGKHSFATAFRNAKNPIVLVGAG 454 >ref|NP_771551.1| NADH dehydrogenase subunit G [Bradyrhizobium japonicum USDA 110] dbj|BAC50176.1| NADH ubiquinone oxidoreductase chain G [Bradyrhizobium japonicum USDA 110] Length = 691 Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/454 (88%), Positives = 432/454 (95%) Query: 1 MSKIIVDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 M+K+I+DGKEIDVP EYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA Sbjct: 1 MTKLIIDGKEIDVPAEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 Query: 61 SCAWAVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 SCAW VRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ Sbjct: 61 SCAWGVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 Query: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEVCGAPEMGATGRGE 180 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEV GAPEMGATGRGE Sbjct: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEVAGAPEMGATGRGE 180 Query: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSVDVMDGVGSAIR 240 DMEITTYL+ AL+SELQGNLVDICPVGALTSKPYAFAARPWELGKTQS+DVMDGVGSAIR Sbjct: 181 DMEITTYLQHALTSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSIDVMDGVGSAIR 240 Query: 241 VDTRGREVMRILPRINEAVNEEWISDKTRHVVDGLRTQRLDRPYVRENGQLRPATWQEAF 300 VDTRGREVMR+LPRINEAVNEEWISDKTRH+VDGLRTQRLDRPY+RE G+LR A+W EAF Sbjct: 241 VDTRGREVMRVLPRINEAVNEEWISDKTRHIVDGLRTQRLDRPYIREAGKLRAASWTEAF 300 Query: 301 AAIAAKAGRSDGKRIGAIAGDLAAVDEMYALKELLAKFGSVNLAVQGGDAFDAKAGRGSY 360 AAIAAKA RSDGKRIGAIAGDLA V+EM+ALK+LLAK+GS NLAV GGDAFD GRGSY Sbjct: 301 AAIAAKAARSDGKRIGAIAGDLAGVEEMFALKDLLAKYGSSNLAVHGGDAFDPALGRGSY 360 Query: 361 IFNPTIAGIDQADAILIVGSHPRKEAAVLNARIRKRWRTGGLKVGMIGAKADFTYDHDYL 420 IFNPT+ G++QADA+LI+G++PRKEAAV NARIRKRWR+GG KVG+IGAKAD TYD+D+L Sbjct: 361 IFNPTLVGVEQADALLIIGANPRKEAAVFNARIRKRWRSGGFKVGVIGAKADLTYDYDHL 420 Query: 421 GAGTDTLADLVAGKHSFADVLKKAQHPIILVGAG 454 GAGT+TL +L AGKHSF DVLK A++PIILVGAG Sbjct: 421 GAGTETLGELAAGKHSFMDVLKNAKNPIILVGAG 454 >ref|YP_318493.1| NADH dehydrogenase subunit G [Nitrobacter winogradskyi Nb-255] gb|ABA05141.1| NADH dehydrogenase subunit G [Nitrobacter winogradskyi Nb-255] Length = 691 Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/453 (85%), Positives = 430/453 (94%) Query: 1 MSKIIVDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 M+K+I+DGKEI+VP EYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA Sbjct: 1 MTKLIIDGKEIEVPAEYTLLQACEAAGAEIPRFCYHERLSIAGNCRMCLVEVKGGPKPVA 60 Query: 61 SCAWAVRDCRPGPKGEPPEISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 SCAW VRDCRPGP GEPP+ISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ Sbjct: 61 SCAWGVRDCRPGPNGEPPQISTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQ 120 Query: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEVCGAPEMGATGRGE 180 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAE+CGAPEMGATGRGE Sbjct: 121 AMGYGVDTSRFAENKRAVEDKYLGALVKTSMNRCIQCTRCVRFSAEICGAPEMGATGRGE 180 Query: 181 DMEITTYLEQALSSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSVDVMDGVGSAIR 240 DMEITTYLE AL+SELQGNLVDICPVGALTSKPYAFAARPWELGKTQS+DVMD VGSAIR Sbjct: 181 DMEITTYLESALTSELQGNLVDICPVGALTSKPYAFAARPWELGKTQSIDVMDAVGSAIR 240 Query: 241 VDTRGREVMRILPRINEAVNEEWISDKTRHVVDGLRTQRLDRPYVRENGQLRPATWQEAF 300 VDTRGREVMRILPR+NEAVNEEWISDKTRH+VDGLRTQRLDRPY+R++G LRPA+W++AF Sbjct: 241 VDTRGREVMRILPRVNEAVNEEWISDKTRHIVDGLRTQRLDRPYIRQDGALRPASWRDAF 300 Query: 301 AAIAAKAGRSDGKRIGAIAGDLAAVDEMYALKELLAKFGSVNLAVQGGDAFDAKAGRGSY 360 AAI AK ++DGKRIGAIAGDLAAV+E++ALK+LL+K GSVN+AVQGGDAF+ GR SY Sbjct: 301 AAITAKVKQADGKRIGAIAGDLAAVEELFALKDLLSKLGSVNMAVQGGDAFNPARGRASY 360 Query: 361 IFNPTIAGIDQADAILIVGSHPRKEAAVLNARIRKRWRTGGLKVGMIGAKADFTYDHDYL 420 IFNPTIAGI+QADA+LIVGS+PRKEAA+LNARIRKRWRTG L++G+IG AD TY++DYL Sbjct: 361 IFNPTIAGIEQADALLIVGSNPRKEAAILNARIRKRWRTGQLRIGVIGENADLTYEYDYL 420 Query: 421 GAGTDTLADLVAGKHSFADVLKKAQHPIILVGA 453 GAG ++LADL AG+++F DVLK A +PI+LVGA Sbjct: 421 GAGGESLADLAAGRNNFRDVLKNASNPIVLVGA 453