BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0053.0034.p         (130 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002288909.1| NADH-quinone oxidoreductase subunit b 1 [Oli...   270   4e-71
ref|YP_318499.1| NADH dehydrogenase subunit B [Nitrobacter winog...   270   4e-71
ref|ZP_08629624.1| NADH-ubiquinone oxidoreductase chain B [Brady...   270   6e-71
ref|YP_002544106.1| NADH-ubiquinone oxidoreductase chain B prote...   269   8e-71
ref|NP_771558.1| NADH dehydrogenase subunit B [Bradyrhizobium ja...   269   1e-70

>ref|YP_002288909.1| NADH-quinone oxidoreductase subunit b 1 [Oligotropha
           carboxidovorans OM5]
 ref|YP_004633046.1| NADH-quinone oxidoreductase subunit B [Oligotropha carboxidovorans
           OM5]
 sp|B6JGW0.1|NUOB_OLICO RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 gb|ACI93044.1| NADH-quinone oxidoreductase subunit b 1 [Oligotropha
           carboxidovorans OM5]
 gb|AEI03228.1| NADH-quinone oxidoreductase subunit B [Oligotropha carboxidovorans
           OM4]
 gb|AEI06805.1| NADH-quinone oxidoreductase subunit B [Oligotropha carboxidovorans
           OM5]
          Length = 198

 Score =  270 bits (691), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 129/130 (99%), Positives = 130/130 (100%)

Query: 1   MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 60
           MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD
Sbjct: 69  MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 128

Query: 61  QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK 120
           QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVP+DIYVPGCPPTAEALLYGVLLLQK
Sbjct: 129 QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLLLQK 188

Query: 121 KIRRIGTIER 130
           KIRRIGTIER
Sbjct: 189 KIRRIGTIER 198


>ref|YP_318499.1| NADH dehydrogenase subunit B [Nitrobacter winogradskyi Nb-255]
 sp|Q3SRE4.1|NUOB_NITWN RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 gb|ABA05147.1| NADH dehydrogenase subunit B [Nitrobacter winogradskyi Nb-255]
          Length = 207

 Score =  270 bits (691), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 60
           MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD
Sbjct: 78  MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 137

Query: 61  QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK 120
           QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVP+DIYVPGCPPTAEALLYG+LLLQK
Sbjct: 138 QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILLLQK 197

Query: 121 KIRRIGTIER 130
           KIRR+GTIER
Sbjct: 198 KIRRVGTIER 207


>ref|ZP_08629624.1| NADH-ubiquinone oxidoreductase chain B [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP08117.1| NADH-ubiquinone oxidoreductase chain B [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 198

 Score =  270 bits (689), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 128/130 (98%), Positives = 129/130 (99%)

Query: 1   MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 60
           MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD
Sbjct: 69  MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 128

Query: 61  QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK 120
           QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVP+DIYVPGCPPTAEALLYGVLLLQK
Sbjct: 129 QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLLLQK 188

Query: 121 KIRRIGTIER 130
           KIRR GTIER
Sbjct: 189 KIRRTGTIER 198


>ref|YP_002544106.1| NADH-ubiquinone oxidoreductase chain B protein [Agrobacterium
           radiobacter K84]
 sp|B9JD43.1|NUOB_AGRRK RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 gb|ACM26180.1| NADH-ubiquinone oxidoreductase chain B protein [Agrobacterium
           radiobacter K84]
          Length = 193

 Score =  269 bits (688), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 128/130 (98%), Positives = 129/130 (99%)

Query: 1   MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 60
           MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD
Sbjct: 64  MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 123

Query: 61  QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK 120
           QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIY+PGCPPTAEALLYGVLLLQK
Sbjct: 124 QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYIPGCPPTAEALLYGVLLLQK 183

Query: 121 KIRRIGTIER 130
           KIRR GTIER
Sbjct: 184 KIRRTGTIER 193


>ref|NP_771558.1| NADH dehydrogenase subunit B [Bradyrhizobium japonicum USDA 110]
 sp|Q89KI7.1|NUOB_BRAJA RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 dbj|BAC50183.1| NADH ubiqionone oxidoreductase chain B [Bradyrhizobium japonicum
           USDA 110]
          Length = 202

 Score =  269 bits (688), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 129/130 (99%), Positives = 129/130 (99%)

Query: 1   MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 60
           MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD
Sbjct: 73  MWMTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD 132

Query: 61  QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK 120
           QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK
Sbjct: 133 QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLLQK 192

Query: 121 KIRRIGTIER 130
           KIRR GTIER
Sbjct: 193 KIRRTGTIER 202