BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0026.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001926045.1| hypothetical protein Mpop_3359 [Methylobacte... 147 7e-34 ref|ZP_00208666.1| COG0382: 4-hydroxybenzoate polyprenyltransfer... 140 9e-32 ref|YP_760768.1| hypothetical protein HNE_2070 [Hyphomonas neptu... 140 1e-31 ref|YP_001101332.1| hypothetical protein HEAR3102 [Herminiimonas... 137 1e-30 ref|YP_002422235.1| hypothetical protein Mchl_3487 [Methylobacte... 134 1e-29 >ref|YP_001926045.1| hypothetical protein Mpop_3359 [Methylobacterium populi BJ001] gb|ACB81510.1| UbiA prenyltransferase [Methylobacterium populi BJ001] Length = 521 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 84/173 (48%), Positives = 110/173 (63%) Query: 30 PASLPLVLDLDGTLITGDLLYLSFFSILRRNPLIVVSCAAWLTRGRAALKRRLAQRQHID 89 P +PLV+DLDGTL+ DLL ++LR NPL++ + WL RGRA KRR+A+ +D Sbjct: 27 PRPVPLVIDLDGTLLRTDLLLEGVIALLRANPLMLFAMLLWLPRGRAYFKRRIAEGAALD 86 Query: 90 WSRIELHQDVVALAERENAAGRRIVLATAADALLARKLASGLPWIDQVLASDGEHNLKGA 149 + + + ++A E AAG+ IVLATAAD L+A + P D+V+ASDG NLKG Sbjct: 87 VATLPANAALLAHIEVRKAAGQEIVLATAADELMALRALRRFPVFDRVVASDGVRNLKGE 146 Query: 150 NKADLLRKTFPEGFIYAGDSASDLAVWAHAAGIITVNAREAVRAAAAGLGRPT 202 KA LR +P+GF YAGDSA+DL VWA A +I V A AV AA LG+P Sbjct: 147 TKAAQLRALYPQGFDYAGDSAADLPVWAAARRVIVVEASTAVLRAAKALGKPV 199 >ref|ZP_00208666.1| COG0382: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Magnetospirillum magnetotacticum MS-1] Length = 292 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 111/170 (65%) Query: 33 LPLVLDLDGTLITGDLLYLSFFSILRRNPLIVVSCAAWLTRGRAALKRRLAQRQHIDWSR 92 +PLV+DLDGTL+ DLL ++LRRN L + + WL +GRA+ K ++A+ +D + Sbjct: 29 VPLVIDLDGTLLRTDLLLEGMIALLRRNWLALFAMLFWLPQGRASFKHKVAEAAGLDVAT 88 Query: 93 IELHQDVVALAERENAAGRRIVLATAADALLARKLASGLPWIDQVLASDGEHNLKGANKA 152 + +++ ++A E + AAGR IVLATAAD L+A + P D+V+ASDG NLKG KA Sbjct: 89 LPVNEALLAHIEAQKAAGREIVLATAADELMALRALRCFPVFDRVIASDGVTNLKGEAKA 148 Query: 153 DLLRKTFPEGFIYAGDSASDLAVWAHAAGIITVNAREAVRAAAAGLGRPT 202 LR +P+GF YAGD+A+DL VWA A +I V A +V AA LG+P Sbjct: 149 AQLRALYPQGFDYAGDAANDLPVWAAARRVIVVEAPASVLRAARALGKPV 198 >ref|YP_760768.1| hypothetical protein HNE_2070 [Hyphomonas neptunium ATCC 15444] gb|ABI76854.1| prenyltransferase, UbiA family [Hyphomonas neptunium ATCC 15444] Length = 484 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/156 (48%), Positives = 101/156 (64%) Query: 32 SLPLVLDLDGTLITGDLLYLSFFSILRRNPLIVVSCAAWLTRGRAALKRRLAQRQHIDWS 91 ++PLVLDLDGTLI D L + +RRNP + W+ GR ALK +LA +D Sbjct: 11 TVPLVLDLDGTLIRTDSLQEQALAFVRRNPFAIFKLIGWVLAGRVALKEQLANAVQLDPE 70 Query: 92 RIELHQDVVALAERENAAGRRIVLATAADALLARKLASGLPWIDQVLASDGEHNLKGANK 151 + +++ VVALA+RE A GR++VLATAA A A+ P+I ++LA+DG+ NLKG K Sbjct: 71 HLPVNEAVVALAQREAATGRKVVLATAAHAETAKAFLQRFPFISEMLATDGKTNLKGKAK 130 Query: 152 ADLLRKTFPEGFIYAGDSASDLAVWAHAAGIITVNA 187 A+ L + FPEGF YAGDS++D+ VW A ITV A Sbjct: 131 AEALAQRFPEGFDYAGDSSADVEVWKRARNAITVGA 166 >ref|YP_001101332.1| hypothetical protein HEAR3102 [Herminiimonas arsenicoxydans] emb|CAL63211.1| putative prenyltransferase [Herminiimonas arsenicoxydans] Length = 504 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 7/193 (3%) Query: 19 RTDGLSPLLGLPAS--LPLVLDLDGTLITGDLLYLSFFSILRRNPLIVVSCAAWLTRGRA 76 R D SP PA+ LPL +DLDGTL DLL+ S +++RNP + C WL RGR Sbjct: 20 RDDATSP----PAASLLPLYVDLDGTLTYTDLLFESVLLLIKRNPFYLFLCCIWLLRGRG 75 Query: 77 ALKRRLAQRQHIDWSRIELHQDVVALAERENAAGRRIVLATAADALLARKLASGLPWIDQ 136 LK +A+R +D S + + ++A + + AGRR++LA+A+D L +++A L D Sbjct: 76 NLKSHIARRIELDVSLLPYNTTLLAYLQHQRVAGRRLILASASDRTLVQRVADYLGIFDA 135 Query: 137 VLASDGEHNLKGANKAD-LLRKTFPEGFIYAGDSASDLAVWAHAAGIITVNAREAVRAAA 195 VL SD NLK A K + GF YAG++A+DLAVWAHAA II VNA V + A Sbjct: 136 VLGSDEALNLKSAAKLQAIAADAGAHGFSYAGNAAADLAVWAHAAEIIVVNASSGVASQA 195 Query: 196 AGLGRPTLHLQGR 208 L P LH+ R Sbjct: 196 QKLQTPALHIPPR 208 >ref|YP_002422235.1| hypothetical protein Mchl_3487 [Methylobacterium chloromethanicum CM4] gb|ACK84307.1| UbiA prenyltransferase [Methylobacterium chloromethanicum CM4] Length = 508 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/170 (48%), Positives = 111/170 (65%) Query: 33 LPLVLDLDGTLITGDLLYLSFFSILRRNPLIVVSCAAWLTRGRAALKRRLAQRQHIDWSR 92 +PLV+DLDGTL+ DLL ++LRRNPL+++ WL RGRA KRR+A+ +D + Sbjct: 26 VPLVIDLDGTLLRTDLLLEGIIALLRRNPLMLLVMLLWLPRGRAFFKRRIAEGAVLDVAT 85 Query: 93 IELHQDVVALAERENAAGRRIVLATAADALLARKLASGLPWIDQVLASDGEHNLKGANKA 152 + + ++A E + AAG+ IVLATAAD L+A + P D+V+ASDG NLKG KA Sbjct: 86 LPANAALLAHIEAQKAAGQEIVLATAADELMALRALRRFPVFDRVVASDGVRNLKGEAKA 145 Query: 153 DLLRKTFPEGFIYAGDSASDLAVWAHAAGIITVNAREAVRAAAAGLGRPT 202 LR +P+GF YAGD+A+DL VWA A +I V A +V AA LG+P Sbjct: 146 AQLRALYPQGFDYAGDAAADLPVWAAARRVIVVGASGSVLRAARRLGKPV 195