BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0015.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_108489.1| hypothetical protein mlr8380 [Mesorhizobium lot... 259 2e-67 ref|YP_004143654.1| GntR family transcriptional regulator [Mesor... 257 8e-67 ref|YP_004613463.1| GntR family transcriptional regulator [Mesor... 255 4e-66 ref|YP_001372486.1| GntR family transcriptional regulator [Ochro... 242 4e-62 ref|ZP_04682651.1| GntR family transcriptional regulator [Ochrob... 241 8e-62 >ref|NP_108489.1| hypothetical protein mlr8380 [Mesorhizobium loti MAFF303099] dbj|BAB53950.1| mlr8380 [Mesorhizobium loti MAFF303099] Length = 372 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 132/223 (59%), Positives = 160/223 (71%) Query: 8 KDGAMSQMLQIHDQLREMILSLDLGPGERLTERWLESRFEGSRTPIRAALVRLEGEELVR 67 + AMSQM + QLREMIL L++GPGE+LTERW+E RF SRTP+RAAL+RLE E LV Sbjct: 148 QGNAMSQMQNVERQLREMILGLEIGPGEKLTERWIEGRFGASRTPVRAALLRLETEGLVG 207 Query: 68 RDGRNWIVAPIDLGELEALAEFRIPLETTAARLACARASAADIAGIEEMLDACQSGAPRE 127 RDGR W V+PI+L ELE +A +R +E A RL C A ++ I IE MLD+C PRE Sbjct: 208 RDGRGWTVSPINLAELEQIAVYREAVEVAAVRLTCMHAESSAIDVIEAMLDSCDQNTPRE 267 Query: 128 EWHRVGTDFHVEIARLSGNPFIVKAIAGAMTRLSRARWLEVWTEPSREQAWREHRRILGL 187 EWHRVG DFH+E+ARLSGN F+ +A+ AMTRLSRARWLEV E + +AW EHR IL Sbjct: 268 EWHRVGMDFHIELARLSGNEFLFRAVRDAMTRLSRARWLEVRDEAALGRAWAEHRAILAA 327 Query: 188 IKANDPEAAAREAADHITDTRDRLLRSLNEDRRGLRARGFAVI 230 + D + AAR HI +RDRL+ SL DRRGLRARGFAV+ Sbjct: 328 ARLGDADEAARLLCAHIVGSRDRLVTSLANDRRGLRARGFAVV 370 >ref|YP_004143654.1| GntR family transcriptional regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV13604.1| GntR domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 221 Score = 257 bits (657), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 130/220 (59%), Positives = 161/220 (73%) Query: 12 MSQMLQIHDQLREMILSLDLGPGERLTERWLESRFEGSRTPIRAALVRLEGEELVRRDGR 71 MSQM + QLR+MIL L++GPGE+LTERW+ESRF SRTP+RAAL+RLE E LV RDGR Sbjct: 1 MSQMHSVEKQLRQMILGLEIGPGEKLTERWIESRFGASRTPVRAALLRLETEGLVGRDGR 60 Query: 72 NWIVAPIDLGELEALAEFRIPLETTAARLACARASAADIAGIEEMLDACQSGAPREEWHR 131 W V+PI+L ELE +A +R +E A RL C+ A + I IE ML++C + PREEWHR Sbjct: 61 GWTVSPINLAELEQIAVYREAVEVAAVRLTCSLADRSAIDVIEAMLESCDNDTPREEWHR 120 Query: 132 VGTDFHVEIARLSGNPFIVKAIAGAMTRLSRARWLEVWTEPSREQAWREHRRILGLIKAN 191 VG DFH+E+ARLSGN F+ +A+ AMTRLSRARWLEV E + +AW EHR IL + Sbjct: 121 VGMDFHIELARLSGNEFLFRAVRDAMTRLSRARWLEVRDEAALSRAWAEHRAILAAARRG 180 Query: 192 DPEAAAREAADHITDTRDRLLRSLNEDRRGLRARGFAVIG 231 D + AAR + HI +RDRL+ SL DRRGLRARGFAV+ Sbjct: 181 DADEAARLLSVHIVGSRDRLVTSLANDRRGLRARGFAVVA 220 >ref|YP_004613463.1| GntR family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH89369.1| transcriptional regulator, GntR family [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 130/219 (59%), Positives = 156/219 (71%) Query: 12 MSQMLQIHDQLREMILSLDLGPGERLTERWLESRFEGSRTPIRAALVRLEGEELVRRDGR 71 MSQM + +LREMIL L++GPGERLTERW+E RF SRTP+RAAL+RLE E LV RDGR Sbjct: 1 MSQMQNVERRLREMILGLEIGPGERLTERWIEGRFGASRTPVRAALLRLETEGLVGRDGR 60 Query: 72 NWIVAPIDLGELEALAEFRIPLETTAARLACARASAADIAGIEEMLDACQSGAPREEWHR 131 W V+PI+L ELE +A +R +E A RL C I IE MLD+C PREEWHR Sbjct: 61 GWTVSPINLAELEQIAVYREAVEVAALRLTCTHVDGNAIDVIEAMLDSCDESTPREEWHR 120 Query: 132 VGTDFHVEIARLSGNPFIVKAIAGAMTRLSRARWLEVWTEPSREQAWREHRRILGLIKAN 191 VG DFH+E+ARLSGN F+ +A+ AMTRLSRARWLEV E + +AW EHR IL + Sbjct: 121 VGMDFHIELARLSGNEFLFRAVRDAMTRLSRARWLEVRDEAALGRAWAEHRAILAAARLG 180 Query: 192 DPEAAAREAADHITDTRDRLLRSLNEDRRGLRARGFAVI 230 D + AAR + HI +RDRL+ SL DRRGLRARGFAV+ Sbjct: 181 DADEAARRLSAHIVGSRDRLVTSLANDRRGLRARGFAVV 219 >ref|YP_001372486.1| GntR family transcriptional regulator [Ochrobactrum anthropi ATCC 49188] gb|ABS16657.1| transcriptional regulator, GntR family [Ochrobactrum anthropi ATCC 49188] Length = 221 Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 120/219 (54%), Positives = 157/219 (71%) Query: 12 MSQMLQIHDQLREMILSLDLGPGERLTERWLESRFEGSRTPIRAALVRLEGEELVRRDGR 71 MSQM Q+ QLR+MIL L+LGPGERLTERW+E++FE SRTPIRAAL+RLE E L+ R+GR Sbjct: 1 MSQMRQVETQLRDMILGLELGPGERLTERWIEAQFEASRTPIRAALLRLEAEGLICREGR 60 Query: 72 NWIVAPIDLGELEALAEFRIPLETTAARLACARASAADIAGIEEMLDACQSGAPREEWHR 131 W V+PI+L E+E + +R LE A +L CA + + I MLD+C + REEWHR Sbjct: 61 GWTVSPINLSEIEQIGVYREALEIAALKLTCALEDRSGVELILAMLDSCDADTSREEWHR 120 Query: 132 VGTDFHVEIARLSGNPFIVKAIAGAMTRLSRARWLEVWTEPSREQAWREHRRILGLIKAN 191 +G DFH+E+ARLSGN F+ + + AM RLSRARWLEV E + +AW EHR IL ++ Sbjct: 121 IGMDFHIELARLSGNEFLSRGVRDAMQRLSRARWLEVRDEAALARAWAEHRSILDAVREG 180 Query: 192 DPEAAAREAADHITDTRDRLLRSLNEDRRGLRARGFAVI 230 + + A + H+ +R RL+ SL+EDRRGL+ARGFAVI Sbjct: 181 NTDKATALMSAHLDGSRSRLVNSLHEDRRGLKARGFAVI 219 >ref|ZP_04682651.1| GntR family transcriptional regulator [Ochrobactrum intermedium LMG 3301] gb|EEQ93955.1| GntR family transcriptional regulator [Ochrobactrum intermedium LMG 3301] Length = 223 Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 120/219 (54%), Positives = 156/219 (71%) Query: 12 MSQMLQIHDQLREMILSLDLGPGERLTERWLESRFEGSRTPIRAALVRLEGEELVRRDGR 71 MSQM Q+ QLR+MIL L+LGPGERLTERW+E++F SRTPIRAAL+RLE E L+ R+GR Sbjct: 3 MSQMRQVETQLRDMILGLELGPGERLTERWIEAQFAASRTPIRAALLRLEAEGLICREGR 62 Query: 72 NWIVAPIDLGELEALAEFRIPLETTAARLACARASAADIAGIEEMLDACQSGAPREEWHR 131 W V+PI+LGE+E + +R LE A +L CA + + I MLD+C + REEWHR Sbjct: 63 GWTVSPINLGEIEQIGVYREALEIAALKLTCALEDRSGVEPIAAMLDSCDADTSREEWHR 122 Query: 132 VGTDFHVEIARLSGNPFIVKAIAGAMTRLSRARWLEVWTEPSREQAWREHRRILGLIKAN 191 +G DFH+E+ARLSGN F+ + + AM RLSRARWLEV E + +AW EHR IL ++ Sbjct: 123 IGMDFHIELARLSGNEFLSRGVRDAMQRLSRARWLEVRDEAALARAWAEHRAILDAVREG 182 Query: 192 DPEAAAREAADHITDTRDRLLRSLNEDRRGLRARGFAVI 230 + E A H+ +R RL+ +L+EDRRGL+ARGFAVI Sbjct: 183 NAEKATALMGAHLDGSRSRLVSNLHEDRRGLKARGFAVI 221