BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0012.p (464 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240506.1| ATP-dependent protease La [Bradyrhizobium sp... 886 0.0 ref|NP_771582.1| ATP-dependent protease LA [Bradyrhizobium japon... 880 0.0 ref|YP_001206173.1| ATP-dependent protease La [Bradyrhizobium sp... 879 0.0 ref|YP_486179.1| ATP-dependent protease La [Rhodopseudomonas pal... 870 0.0 ref|YP_318509.1| peptidase S16, ATP-dependent protease La [Nitro... 869 0.0 >ref|YP_001240506.1| ATP-dependent protease La [Bradyrhizobium sp. BTAi1] gb|ABQ36600.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16 [Bradyrhizobium sp. BTAi1] Length = 807 Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/464 (94%), Positives = 451/464 (97%), Gaps = 2/464 (0%) Query: 1 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 60 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI Sbjct: 346 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 405 Query: 61 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 120 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMG+DFRGDPSSALLEVLDPEQN+TFNDHYLEV Sbjct: 406 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGSDFRGDPSSALLEVLDPEQNTTFNDHYLEV 465 Query: 121 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPSALSKHGLDSK 180 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTE EKVEIARKHLIPSALSKHGLDSK Sbjct: 466 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTETEKVEIARKHLIPSALSKHGLDSK 525 Query: 181 EWSIDDAALLLMIRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTEANIEEFLG 240 EWSIDD ALLL+IRRYTREAGVRNLERE+STLARKAVKELMISKKKSVKVTE +EEFLG Sbjct: 526 EWSIDDDALLLVIRRYTREAGVRNLEREISTLARKAVKELMISKKKSVKVTEKAVEEFLG 585 Query: 241 VPKYRFGEIDDEDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 300 VPKYRFGEI+ +DQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA Sbjct: 586 VPKYRFGEIEQDDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 645 Query: 301 AASYVRSRAITYGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD 360 AASYVRSRAI YGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIP+RHD Sbjct: 646 AASYVRSRAINYGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPIRHD 705 Query: 361 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMDIIPV 420 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGM+IIPV Sbjct: 706 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEIIPV 765 Query: 421 SRLDEVVAKALVRVPAPIVWEEETSKVDVKPDASDEASGGLTAH 464 SRLD+VVA+ALVR P PIVWEE+T KV VK D DEA+GGLTAH Sbjct: 766 SRLDDVVARALVRKPVPIVWEEDT-KVPVKADG-DEAAGGLTAH 807 >ref|NP_771582.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 110] dbj|BAC50207.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 110] Length = 807 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/464 (93%), Positives = 451/464 (97%), Gaps = 2/464 (0%) Query: 1 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 60 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI Sbjct: 346 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 405 Query: 61 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 120 GSMPGKIIQSMRKAK+SNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQN TFNDHYLEV Sbjct: 406 GSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFNDHYLEV 465 Query: 121 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPSALSKHGLDSK 180 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIP+A+SKHGLDSK Sbjct: 466 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAVSKHGLDSK 525 Query: 181 EWSIDDAALLLMIRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTEANIEEFLG 240 E+SIDD ALLL+IRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTE ++EE LG Sbjct: 526 EFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTEKSLEELLG 585 Query: 241 VPKYRFGEIDDEDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 300 VPKYRFGEI+ E QVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA Sbjct: 586 VPKYRFGEIESEPQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 645 Query: 301 AASYVRSRAITYGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD 360 AASYVRSRAI YGIEPP+FDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD Sbjct: 646 AASYVRSRAIVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD 705 Query: 361 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMDIIPV 420 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGM+IIPV Sbjct: 706 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEIIPV 765 Query: 421 SRLDEVVAKALVRVPAPIVWEEETSKVDVKPDASDEASGGLTAH 464 SRLD+VVA+ALV+ P PIVWEE+T KV VKPD DEA+GGLTAH Sbjct: 766 SRLDDVVARALVKKPVPIVWEEDT-KVTVKPDG-DEAAGGLTAH 807 >ref|YP_001206173.1| ATP-dependent protease La [Bradyrhizobium sp. ORS 278] emb|CAL77948.1| ATP-dependent protease La [Bradyrhizobium sp. ORS 278] Length = 807 Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/464 (93%), Positives = 450/464 (96%), Gaps = 2/464 (0%) Query: 1 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 60 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI Sbjct: 346 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 405 Query: 61 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 120 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMG+DFRGDPSSALLEVLDPEQN+TFNDHYLEV Sbjct: 406 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGSDFRGDPSSALLEVLDPEQNTTFNDHYLEV 465 Query: 121 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPSALSKHGLDSK 180 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTE EKVEIARKHLIPSA+SKHGLDSK Sbjct: 466 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTETEKVEIARKHLIPSAISKHGLDSK 525 Query: 181 EWSIDDAALLLMIRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTEANIEEFLG 240 EWSIDD ALLL+IRRYTREAGVRNLERE+STLARKAVKELM+SKKKSVK+TE +EEFLG Sbjct: 526 EWSIDDDALLLVIRRYTREAGVRNLEREISTLARKAVKELMMSKKKSVKITEKTVEEFLG 585 Query: 241 VPKYRFGEIDDEDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 300 VPKYRFGEI+ +DQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA Sbjct: 586 VPKYRFGEIESDDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 645 Query: 301 AASYVRSRAITYGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD 360 AAS+VRSRAI YGIEPP+FDRRDIHVHVPEGATPKDGPSAGVAMAT IISVMTGIPVRHD Sbjct: 646 AASFVRSRAINYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATTIISVMTGIPVRHD 705 Query: 361 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMDIIPV 420 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGM+IIPV Sbjct: 706 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEIIPV 765 Query: 421 SRLDEVVAKALVRVPAPIVWEEETSKVDVKPDASDEASGGLTAH 464 SRLD+VVA+ALVR P PIVWEE+T KV VK D DEA+GGLTAH Sbjct: 766 SRLDDVVARALVRKPVPIVWEEDT-KVPVKADG-DEAAGGLTAH 807 >ref|YP_486179.1| ATP-dependent protease La [Rhodopseudomonas palustris HaA2] gb|ABD07268.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Rhodopseudomonas palustris HaA2] Length = 812 Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/467 (91%), Positives = 449/467 (96%), Gaps = 3/467 (0%) Query: 1 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 60 VQSRANKL+GPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI Sbjct: 346 VQSRANKLSGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 405 Query: 61 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 120 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV Sbjct: 406 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 465 Query: 121 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPSALSKHGLDSK 180 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIP AL+KHGLDSK Sbjct: 466 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPLALTKHGLDSK 525 Query: 181 EWSIDDAALLLMIRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTEANIEEFLG 240 EWSIDD ALLLMIRRYTREAGVRNLERELSTLARKAVK+LM+SKKKSVKVTE IEE+LG Sbjct: 526 EWSIDDDALLLMIRRYTREAGVRNLERELSTLARKAVKDLMLSKKKSVKVTEKAIEEYLG 585 Query: 241 VPKYRFGEIDDEDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 300 VPK+RFGEI+ EDQVG+VTGLAWTDVGGELLTIE VMMPGKG+MTVTGNLRDVMKESISA Sbjct: 586 VPKFRFGEIELEDQVGVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISA 645 Query: 301 AASYVRSRAITYGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD 360 AASYVRSRAIT+GIEPP F+RRDIHVHVPEGATPKDGPSAGVAMAT I+SV+TGIP+R D Sbjct: 646 AASYVRSRAITFGIEPPFFERRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIPIRRD 705 Query: 361 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMDIIPV 420 +AMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGG++IIPV Sbjct: 706 IAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGLNIIPV 765 Query: 421 SRLDEVVAKALVRVPAPIVWEEET-SKVDVKPDAS--DEASGGLTAH 464 +R+DEV+A ALVR P PIVWEEET +K+ KP+ S DEA+GGLTAH Sbjct: 766 ARMDEVIANALVRAPVPIVWEEETAAKIPGKPETSEADEAAGGLTAH 812 >ref|YP_318509.1| peptidase S16, ATP-dependent protease La [Nitrobacter winogradskyi Nb-255] gb|ABA05157.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16 [Nitrobacter winogradskyi Nb-255] Length = 808 Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/464 (90%), Positives = 452/464 (97%), Gaps = 1/464 (0%) Query: 1 VQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYI 60 VQSRANKLTGPILCLVGPPGVGKTSLGKSIA+ATGREFVRVSLGGVRDEAEIRGHRRTYI Sbjct: 346 VQSRANKLTGPILCLVGPPGVGKTSLGKSIARATGREFVRVSLGGVRDEAEIRGHRRTYI 405 Query: 61 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 120 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV Sbjct: 406 GSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTFNDHYLEV 465 Query: 121 DYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPSALSKHGLDSK 180 DYDLSNVMF+TTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIP+ALSKHGLDSK Sbjct: 466 DYDLSNVMFLTTANTLNIPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNALSKHGLDSK 525 Query: 181 EWSIDDAALLLMIRRYTREAGVRNLERELSTLARKAVKELMISKKKSVKVTEANIEEFLG 240 EWSI+D ALLL+IRRYTREAGVRNLERELSTLARKAVKELM+SKKKSV+VTE +E+FLG Sbjct: 526 EWSINDEALLLIIRRYTREAGVRNLERELSTLARKAVKELMLSKKKSVEVTEKVVEDFLG 585 Query: 241 VPKYRFGEIDDEDQVGIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 300 VPKYRFGEI+ +DQVG+VTGLAWTDVGGELLTIE VMMPGKG+MTVTGNLRDVMKESISA Sbjct: 586 VPKYRFGEIETDDQVGVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISA 645 Query: 301 AASYVRSRAITYGIEPPMFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHD 360 AASYVRSRAIT+GIEPP+F+RRDIHVHVPEGATPKDGPSAGVAMAT I+SV+TGIP+R D Sbjct: 646 AASYVRSRAITFGIEPPLFERRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIPIRRD 705 Query: 361 VAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMDIIPV 420 +AMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIP++NAKDLTEIS+AIKGG++IIPV Sbjct: 706 IAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPDENAKDLTEISEAIKGGLEIIPV 765 Query: 421 SRLDEVVAKALVRVPAPIVWEEETSKVDVKPDASDEASGGLTAH 464 +R+DEV+AKALVR P PIVWEE+T K+ V PDA+DEA+GGLTAH Sbjct: 766 ARMDEVIAKALVRQPKPIVWEEDT-KLPVNPDAADEAAGGLTAH 808