BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0005.p (133 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pdb|3TOY|A Chain A, Crystal Structure Of Enolase Brado_4202 (Tar... 197 4e-49 ref|YP_001206179.1| putative mandelate racemase/muconate lactoni... 197 4e-49 ref|YP_001240512.1| putative mandelate racemase/muconate lactoni... 194 3e-48 ref|YP_004617092.1| Mandelate racemase [Ramlibacter tataouinensi... 125 3e-27 ref|ZP_06966176.1| Mandelate racemase/muconate lactonizing prote... 117 7e-25 >pdb|3TOY|A Chain A, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TOY|B Chain B, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TOY|C Chain C, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TOY|D Chain D, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TTE|A Chain A, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Complexed With Magnesium And Mandelic Acid pdb|3TTE|B Chain B, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Complexed With Magnesium And Mandelic Acid Length = 383 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 92/120 (76%), Positives = 107/120 (89%) Query: 4 TVAAIRGVRARSVVVPLKRPVKNAFGVIDSGPLVLIDVETDQGITGRSYIFAYSKLTLKP 63 T AAI GV AR+V+ P+KRP++NAFGVIDSGPLVLIDV TDQG+TG SY+FAY++L LKP Sbjct: 25 TTAAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFAYTRLALKP 84 Query: 64 LAYLIEEIGRELIGKPVAPFDLMKAMDAKFRLLGWQGLVGMAVSGLDMAYWDVLGQLAGR 123 L +L+E+IGREL GK + P DLMKAMDAKFRLLGWQGLVGMAVSGLDMA+WD LGQLAG+ Sbjct: 85 LVHLVEDIGRELAGKALVPVDLMKAMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGK 144 >ref|YP_001206179.1| putative mandelate racemase/muconate lactonizing family protein [Bradyrhizobium sp. ORS 278] emb|CAL77954.1| Putative Mandelate racemase/muconate lactonizing enzyme family protein [Bradyrhizobium sp. ORS 278] Length = 360 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 92/120 (76%), Positives = 107/120 (89%) Query: 4 TVAAIRGVRARSVVVPLKRPVKNAFGVIDSGPLVLIDVETDQGITGRSYIFAYSKLTLKP 63 T AAI GV AR+V+ P+KRP++NAFGVIDSGPLVLIDV TDQG+TG SY+FAY++L LKP Sbjct: 2 TTAAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFAYTRLALKP 61 Query: 64 LAYLIEEIGRELIGKPVAPFDLMKAMDAKFRLLGWQGLVGMAVSGLDMAYWDVLGQLAGR 123 L +L+E+IGREL GK + P DLMKAMDAKFRLLGWQGLVGMAVSGLDMA+WD LGQLAG+ Sbjct: 62 LVHLVEDIGRELAGKALVPVDLMKAMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGK 121 >ref|YP_001240512.1| putative mandelate racemase/muconate lactonizing family protein [Bradyrhizobium sp. BTAi1] gb|ABQ36606.1| Putative Mandelate racemase/muconate lactonizing enzyme family protein [Bradyrhizobium sp. BTAi1] Length = 360 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 90/120 (75%), Positives = 106/120 (88%) Query: 4 TVAAIRGVRARSVVVPLKRPVKNAFGVIDSGPLVLIDVETDQGITGRSYIFAYSKLTLKP 63 T+AAI GV AR+V+ P+KRP++NAFGVID+GPLVLIDV TDQG+TG SY+FAY++L LKP Sbjct: 2 TIAAITGVTARAVITPMKRPLRNAFGVIDTGPLVLIDVATDQGVTGHSYLFAYTRLALKP 61 Query: 64 LAYLIEEIGRELIGKPVAPFDLMKAMDAKFRLLGWQGLVGMAVSGLDMAYWDVLGQLAGR 123 L L+EEIGREL GK + P DLMK MDAKFRLLGWQGLVGMAVSGLDMA+WD LGQ+AG+ Sbjct: 62 LVLLVEEIGRELTGKALVPIDLMKLMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQIAGK 121 >ref|YP_004617092.1| Mandelate racemase [Ramlibacter tataouinensis TTB310] gb|AEG91073.1| Candidate Mandelate racemase [Ramlibacter tataouinensis TTB310] Length = 359 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/116 (50%), Positives = 87/116 (75%) Query: 8 IRGVRARSVVVPLKRPVKNAFGVIDSGPLVLIDVETDQGITGRSYIFAYSKLTLKPLAYL 67 +R ++AR+VV PL RPV+ A G +++ PL+L+DV TD+GITG +Y+FAY+ + L+PL+ L Sbjct: 6 LRDLQARAVVAPLVRPVRTASGAVEAAPLLLLDVLTDEGITGSAYLFAYTPVVLQPLSVL 65 Query: 68 IEEIGRELIGKPVAPFDLMKAMDAKFRLLGWQGLVGMAVSGLDMAYWDVLGQLAGR 123 ++ L G+PV PF L + ++ +FRLLG QGL+GM +S LDMA WD LG+ AG+ Sbjct: 66 AGQLAPLLRGQPVVPFTLQQQLERQFRLLGRQGLLGMLLSTLDMACWDALGKAAGQ 121 >ref|ZP_06966176.1| Mandelate racemase/muconate lactonizing protein [Ktedonobacter racemifer DSM 44963] gb|EFH89287.1| Mandelate racemase/muconate lactonizing protein [Ktedonobacter racemifer DSM 44963] Length = 361 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 53/115 (46%), Positives = 80/115 (69%) Query: 8 IRGVRARSVVVPLKRPVKNAFGVIDSGPLVLIDVETDQGITGRSYIFAYSKLTLKPLAYL 67 I + AR+V+ P+ RPV+ A G I + PLVL+D++T++GI GRSY FAY+ L L+ L Sbjct: 7 INSIAARAVLAPMPRPVRTASGDILAAPLVLVDIQTNEGIIGRSYAFAYNPLMLRSLVQF 66 Query: 68 IEEIGRELIGKPVAPFDLMKAMDAKFRLLGWQGLVGMAVSGLDMAYWDVLGQLAG 122 + ++ +L+GK V+P + M+ ++ + L+GWQG+ GMAV LDMA WD LG+ A Sbjct: 67 LRDVAPDLVGKAVSPRERMRQLEKRLTLVGWQGVAGMAVGTLDMALWDALGRAAN 121