BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0004.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pdb|3TOY|A Chain A, Crystal Structure Of Enolase Brado_4202 (Tar... 340 7e-92 ref|YP_001206179.1| putative mandelate racemase/muconate lactoni... 340 1e-91 ref|YP_001240512.1| putative mandelate racemase/muconate lactoni... 335 3e-90 ref|YP_004617092.1| Mandelate racemase [Ramlibacter tataouinensi... 259 3e-67 ref|ZP_06966176.1| Mandelate racemase/muconate lactonizing prote... 231 4e-59 >pdb|3TOY|A Chain A, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TOY|B Chain B, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TOY|C Chain C, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TOY|D Chain D, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium And Acetate Bound pdb|3TTE|A Chain A, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Complexed With Magnesium And Mandelic Acid pdb|3TTE|B Chain B, Crystal Structure Of Enolase Brado_4202 (Target Efi-501651) From Bradyrhizobium Complexed With Magnesium And Mandelic Acid Length = 383 Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 167/219 (76%), Positives = 187/219 (85%), Gaps = 1/219 (0%) Query: 1 VVDPVADERALRRSLDQ-GFRGIKIKGGDGNAAIDERVVKGVRALLGPDIALMIDFNQSL 59 V+D DER LR + D+ GFR IK KGG G+ A DE ++KG+RALLGPDIALM+DFNQSL Sbjct: 165 VLDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSL 224 Query: 60 DPAEATRRIARLAPYDLHWIEEPVPQESLSGHAKVRETSPTPIQAGENWWFPRGFAEAIA 119 DPAEATRRIARLA YDL WIEEPVPQE+LSGHA VRE S PIQAGENWWFPRGFAEAIA Sbjct: 225 DPAEATRRIARLADYDLTWIEEPVPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIA 284 Query: 120 AGASDFIMPDVMKVGGVTGWVQVAGQADAASIPMSSHLFAEVSAHLLAVTPTAHWLEFLD 179 AGASDFIMPD+MKVGG+TGW+ VAGQADAASIPMSSH+ E SAH+L VTPTAH+LE LD Sbjct: 285 AGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHILPEASAHVLPVTPTAHFLEVLD 344 Query: 180 FAGSILTRPAEIVDGAVTARGPGLGIEWNEPAVAKYLVT 218 FAG+ILT P ++DG VTA+GPGLG+ WNE AVAKY VT Sbjct: 345 FAGAILTEPLRVIDGKVTAKGPGLGLAWNESAVAKYQVT 383 >ref|YP_001206179.1| putative mandelate racemase/muconate lactonizing family protein [Bradyrhizobium sp. ORS 278] emb|CAL77954.1| Putative Mandelate racemase/muconate lactonizing enzyme family protein [Bradyrhizobium sp. ORS 278] Length = 360 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 167/219 (76%), Positives = 187/219 (85%), Gaps = 1/219 (0%) Query: 1 VVDPVADERALRRSLDQ-GFRGIKIKGGDGNAAIDERVVKGVRALLGPDIALMIDFNQSL 59 V+D DER LR + D+ GFR IK KGG G+ A DE ++KG+RALLGPDIALM+DFNQSL Sbjct: 142 VLDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSL 201 Query: 60 DPAEATRRIARLAPYDLHWIEEPVPQESLSGHAKVRETSPTPIQAGENWWFPRGFAEAIA 119 DPAEATRRIARLA YDL WIEEPVPQE+LSGHA VRE S PIQAGENWWFPRGFAEAIA Sbjct: 202 DPAEATRRIARLADYDLTWIEEPVPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIA 261 Query: 120 AGASDFIMPDVMKVGGVTGWVQVAGQADAASIPMSSHLFAEVSAHLLAVTPTAHWLEFLD 179 AGASDFIMPD+MKVGG+TGW+ VAGQADAASIPMSSH+ E SAH+L VTPTAH+LE LD Sbjct: 262 AGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHILPEASAHVLPVTPTAHFLEVLD 321 Query: 180 FAGSILTRPAEIVDGAVTARGPGLGIEWNEPAVAKYLVT 218 FAG+ILT P ++DG VTA+GPGLG+ WNE AVAKY VT Sbjct: 322 FAGAILTEPLRVIDGKVTAKGPGLGLAWNESAVAKYQVT 360 >ref|YP_001240512.1| putative mandelate racemase/muconate lactonizing family protein [Bradyrhizobium sp. BTAi1] gb|ABQ36606.1| Putative Mandelate racemase/muconate lactonizing enzyme family protein [Bradyrhizobium sp. BTAi1] Length = 360 Score = 335 bits (859), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 163/218 (74%), Positives = 185/218 (84%), Gaps = 1/218 (0%) Query: 1 VVDPVADERALRRSLDQ-GFRGIKIKGGDGNAAIDERVVKGVRALLGPDIALMIDFNQSL 59 V+D AD R LR + D+ GFR IK KGG G+ A D +++G+R LLGPDIALM+DFNQSL Sbjct: 142 VLDAKADARTLRTACDEHGFRAIKTKGGHGDLATDAAMIEGLRTLLGPDIALMLDFNQSL 201 Query: 60 DPAEATRRIARLAPYDLHWIEEPVPQESLSGHAKVRETSPTPIQAGENWWFPRGFAEAIA 119 DPAEATRRI RLA YDL WIEEPVPQE+LSGHA+VRE S PIQAGENWWFPRGFAEAIA Sbjct: 202 DPAEATRRITRLANYDLTWIEEPVPQENLSGHAQVRERSDIPIQAGENWWFPRGFAEAIA 261 Query: 120 AGASDFIMPDVMKVGGVTGWVQVAGQADAASIPMSSHLFAEVSAHLLAVTPTAHWLEFLD 179 AGASDFIMPD+MKVGG+TGW+ VAGQADAASIPMSSH+ E SAH+LAVTPTAH+LE LD Sbjct: 262 AGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHILPEASAHVLAVTPTAHFLEVLD 321 Query: 180 FAGSILTRPAEIVDGAVTARGPGLGIEWNEPAVAKYLV 217 AG+IL P +++DG VTARGPGLG+ WNEPAVAKY V Sbjct: 322 VAGAILAEPLQVIDGKVTARGPGLGLAWNEPAVAKYQV 359 >ref|YP_004617092.1| Mandelate racemase [Ramlibacter tataouinensis TTB310] gb|AEG91073.1| Candidate Mandelate racemase [Ramlibacter tataouinensis TTB310] Length = 359 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 126/217 (58%), Positives = 156/217 (71%) Query: 1 VVDPVADERALRRSLDQGFRGIKIKGGDGNAAIDERVVKGVRALLGPDIALMIDFNQSLD 60 +VDP D AL RS+ QGFRGIKIK G G+ A D V+ VR ++G IALM+D+NQSL Sbjct: 142 LVDPARDAAALERSVAQGFRGIKIKLGGGDLAHDLATVREVRRIVGDGIALMVDYNQSLA 201 Query: 61 PAEATRRIARLAPYDLHWIEEPVPQESLSGHAKVRETSPTPIQAGENWWFPRGFAEAIAA 120 P EA RRI L P+DL W+EEPV E L GHA+VR S PIQ GENWWF R A++A Sbjct: 202 PGEAIRRIRALEPFDLEWVEEPVAAEDLQGHAQVRAQSRIPIQTGENWWFARDAERAVSA 261 Query: 121 GASDFIMPDVMKVGGVTGWVQVAGQADAASIPMSSHLFAEVSAHLLAVTPTAHWLEFLDF 180 A D +MPD+MK+GG+TGW+ V G A AAS+P+SSHLF E SAH+L VTPT WLEF+DF Sbjct: 262 RACDRMMPDLMKIGGITGWLGVMGAAQAASMPVSSHLFIEASAHVLPVTPTCDWLEFMDF 321 Query: 181 AGSILTRPAEIVDGAVTARGPGLGIEWNEPAVAKYLV 217 ++L P + DG V+A+GPGLG+ W+E AVA+Y V Sbjct: 322 GSAVLASPCTLKDGCVSAQGPGLGMVWDEDAVARYRV 358 >ref|ZP_06966176.1| Mandelate racemase/muconate lactonizing protein [Ktedonobacter racemifer DSM 44963] gb|EFH89287.1| Mandelate racemase/muconate lactonizing protein [Ktedonobacter racemifer DSM 44963] Length = 361 Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 119/215 (55%), Positives = 141/215 (65%), Gaps = 1/215 (0%) Query: 1 VVDPVADERALRRSLDQGFRGIKIKGGDGNAAIDERVVKGVRALLGPDIALMIDFNQSLD 60 ++D D + S+ GF IKIK G G A D VV VR L+GP + LMIDFNQS Sbjct: 143 ILDIKTDLAWIEASVASGFEAIKIKLGAGEVANDIAVVAAVRKLIGPKVRLMIDFNQSQT 202 Query: 61 PAEATRRIARLAPYDLHWIEEPVPQESLSGHAKVRE-TSPTPIQAGENWWFPRGFAEAIA 119 A A RI RL +DL W+EEPV + L GH VRE P IQ GENWWFPRG A AIA Sbjct: 203 TASAIERILRLQEFDLTWVEEPVAADDLQGHRAVREAVHPVLIQTGENWWFPRGMANAIA 262 Query: 120 AGASDFIMPDVMKVGGVTGWVQVAGQADAASIPMSSHLFAEVSAHLLAVTPTAHWLEFLD 179 A ASD M D+MK+GGVTGW+ AGQA+AAS+P+SSH F E SAH +A +PTA W E+LD Sbjct: 263 ARASDLAMIDIMKIGGVTGWISAAGQAEAASLPLSSHTFIEASAHTMAASPTASWFEYLD 322 Query: 180 FAGSILTRPAEIVDGAVTARGPGLGIEWNEPAVAK 214 AG++LT G V RGPGLG+EW+E AV K Sbjct: 323 LAGAVLTERLLPNKGKVVPRGPGLGLEWDEKAVHK 357