BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0052.0035.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771447.1| triosephosphate isomerase [Bradyrhizobium japon... 415 e-114 ref|YP_001240422.1| triosephosphate isomerase [Bradyrhizobium sp... 404 e-111 ref|YP_001206084.1| triosephosphate isomerase (TIM) (Triose-phos... 392 e-107 ref|YP_532341.1| triosephosphate isomerase [Rhodopseudomonas pal... 390 e-106 ref|YP_577011.1| triosephosphate isomerase [Nitrobacter hamburge... 389 e-106 >ref|NP_771447.1| triosephosphate isomerase [Bradyrhizobium japonicum USDA 110] sp|Q89KU3.1|TPIS_BRAJA RecName: Full=Triosephosphate isomerase; Short=TIM; AltName: Full=Triose-phosphate isomerase dbj|BAC50072.1| triosephosphate isomerase [Bradyrhizobium japonicum USDA 110] Length = 251 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 205/250 (82%), Positives = 222/250 (88%) Query: 27 MTDAIRPLIAGNWKMNGLKSSFVEFDAMLAGAGDVAGKADLLVCPPATLVGAFADKARGS 86 MTDAIRPLIAGNWKMNGLK+S EFDAML GA DVA KADLLVCPPATL+ AFADKARG Sbjct: 1 MTDAIRPLIAGNWKMNGLKASAAEFDAMLNGAADVATKADLLVCPPATLIAAFADKARGK 60 Query: 87 KVAVGAQDCHPKASGAHTGDLSAEMFKDLGAVAIIVGHSERRADHGETDALIRQKAEAAW 146 KVAVGAQDCHPKASGAHTGD++AEM + GA AIIVGHSERRADHGE DAL+RQKAEAAW Sbjct: 61 KVAVGAQDCHPKASGAHTGDIAAEMLANAGATAIIVGHSERRADHGEGDALVRQKAEAAW 120 Query: 147 RAHLTAIVCIGETREQRDAGKTLDVCGTQLAGSLPDGSTAANLVVAYEPVWAIGTGLTPT 206 RA +TAIVCIGET+ QRDAG+TLD+ QL GSLPDGSTAANLVVAYEPVWAIGTGLTPT Sbjct: 121 RAGVTAIVCIGETQAQRDAGQTLDILRGQLDGSLPDGSTAANLVVAYEPVWAIGTGLTPT 180 Query: 207 AKDVEEVHRFIRGQLTDRFKGEGNRIRILYGGSVKPSNAAELMAVANVNGALVGGASLKA 266 +DVE++H FIR LT RF +G ++RILYGGSVKPSNAAELMAV NVNGALVGGASLKA Sbjct: 181 VQDVEQIHGFIREFLTSRFSVDGAKMRILYGGSVKPSNAAELMAVKNVNGALVGGASLKA 240 Query: 267 SDFLAIAAGC 276 +DFLAIA GC Sbjct: 241 ADFLAIAKGC 250 >ref|YP_001240422.1| triosephosphate isomerase [Bradyrhizobium sp. BTAi1] sp|A5EK22.1|TPIS_BRASB RecName: Full=Triosephosphate isomerase; Short=TIM; AltName: Full=Triose-phosphate isomerase gb|ABQ36516.1| triosephosphate isomerase [Bradyrhizobium sp. BTAi1] Length = 251 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/251 (79%), Positives = 218/251 (86%), Gaps = 1/251 (0%) Query: 27 MTDAIRPLIAGNWKMNGLKSSFVEFDAMLAGAGDVAGKADLLVCPPATLVGAFADKARGS 86 MTD IRPLIAGNWKMNGLK+S EF+AMLAGA +V GKADLLVCPPATL+ FADKARG+ Sbjct: 1 MTDHIRPLIAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGT 60 Query: 87 K-VAVGAQDCHPKASGAHTGDLSAEMFKDLGAVAIIVGHSERRADHGETDALIRQKAEAA 145 + VAVGAQDCH KASGAHTGDLSAEM D GA AIIVGHSERRADHGE+D ++ QK EA Sbjct: 61 RAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAV 120 Query: 146 WRAHLTAIVCIGETREQRDAGKTLDVCGTQLAGSLPDGSTAANLVVAYEPVWAIGTGLTP 205 WRA L AIVC+GET++QRDAG+TLD+ QL SLP GSTAANL VAYEPVWAIGTGLTP Sbjct: 121 WRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTP 180 Query: 206 TAKDVEEVHRFIRGQLTDRFKGEGNRIRILYGGSVKPSNAAELMAVANVNGALVGGASLK 265 TAKDVE++H FIR L +RF GEG R+RILYGGSVKPSNAAELMAVANVNGALVGGASLK Sbjct: 181 TAKDVEQIHAFIRTLLIERFNGEGARMRILYGGSVKPSNAAELMAVANVNGALVGGASLK 240 Query: 266 ASDFLAIAAGC 276 A+DFLAIA GC Sbjct: 241 AADFLAIAKGC 251 >ref|YP_001206084.1| triosephosphate isomerase (TIM) (Triose-phosphate isomerase) [Bradyrhizobium sp. ORS 278] sp|A4YVD3.1|TPIS_BRASO RecName: Full=Triosephosphate isomerase; Short=TIM; AltName: Full=Triose-phosphate isomerase emb|CAL77859.1| Triosephosphate isomerase (TIM) (Triose-phosphate isomerase) [Bradyrhizobium sp. ORS 278] Length = 251 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/251 (77%), Positives = 216/251 (86%), Gaps = 1/251 (0%) Query: 27 MTDAIRPLIAGNWKMNGLKSSFVEFDAMLAGAGDVAGKADLLVCPPATLVGAFADKARGS 86 MTD IRPLIAGNWKMNGLK+S EF+AMLAGA +V GKADLLVCPPATL+ AFA+K RG Sbjct: 1 MTDRIRPLIAGNWKMNGLKASAAEFEAMLAGAAEVTGKADLLVCPPATLLAAFAEKTRGG 60 Query: 87 K-VAVGAQDCHPKASGAHTGDLSAEMFKDLGAVAIIVGHSERRADHGETDALIRQKAEAA 145 K VAVGAQDCH KASGAHTGD+SAEM D GA A+IVGHSERRADHGE+D ++ QKAEAA Sbjct: 61 KAVAVGAQDCHAKASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDVVVHQKAEAA 120 Query: 146 WRAHLTAIVCIGETREQRDAGKTLDVCGTQLAGSLPDGSTAANLVVAYEPVWAIGTGLTP 205 WRA L AIVC+GET++QRDAG TL++ QL SLP+GS A NL+VAYEPVWAIGTGLTP Sbjct: 121 WRAGLVAIVCVGETQQQRDAGLTLEILRGQLTLSLPEGSRADNLIVAYEPVWAIGTGLTP 180 Query: 206 TAKDVEEVHRFIRGQLTDRFKGEGNRIRILYGGSVKPSNAAELMAVANVNGALVGGASLK 265 TA DVE++H FIR L RFK +G R+RILYGGSVKPSNAAELMAVANVNGALVGGASLK Sbjct: 181 TAGDVEQIHSFIRQLLIVRFKEQGARMRILYGGSVKPSNAAELMAVANVNGALVGGASLK 240 Query: 266 ASDFLAIAAGC 276 A+DFLAIA GC Sbjct: 241 AADFLAIAKGC 251 >ref|YP_532341.1| triosephosphate isomerase [Rhodopseudomonas palustris BisB18] sp|Q215B4.1|TPIS_RHOPB RecName: Full=Triosephosphate isomerase; Short=TIM; AltName: Full=Triose-phosphate isomerase gb|ABD88022.1| triosephosphate isomerase [Rhodopseudomonas palustris BisB18] Length = 257 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 190/256 (74%), Positives = 215/256 (83%), Gaps = 6/256 (2%) Query: 27 MTDAIRPLIAGNWKMNGLKSSFVEFDAMLAGAGDVAGKADLLVCPPATLVGAFADK---- 82 M+ AIRPLIAGNWKMNGL++S E ML GAG ++ ADLL+CPPATLV AFA K Sbjct: 1 MSAAIRPLIAGNWKMNGLRASLSELKLMLEGAGKLSATADLLICPPATLVAAFAQKLAAD 60 Query: 83 --ARGSKVAVGAQDCHPKASGAHTGDLSAEMFKDLGAVAIIVGHSERRADHGETDALIRQ 140 +R + A+GAQDCHP+ASGAHTGD+SAEM D GA A+IVGHSERRADHGE+DAL+R+ Sbjct: 61 TGSRSNSFAIGAQDCHPRASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDALVRE 120 Query: 141 KAEAAWRAHLTAIVCIGETREQRDAGKTLDVCGTQLAGSLPDGSTAANLVVAYEPVWAIG 200 KAEAAWRA L AI+C+GET+ QRDAG+TLDV GTQLAGSLPDG+TAAN VVAYEPVWAIG Sbjct: 121 KAEAAWRAGLVAIICVGETQGQRDAGQTLDVVGTQLAGSLPDGATAANTVVAYEPVWAIG 180 Query: 201 TGLTPTAKDVEEVHRFIRGQLTDRFKGEGNRIRILYGGSVKPSNAAELMAVANVNGALVG 260 TG TPT DVE+VH FIR LT R GEG+++RILYGGSVKPSNA ELMAVA+VNGALVG Sbjct: 181 TGRTPTVADVEQVHGFIRKSLTQRMSGEGSKVRILYGGSVKPSNAQELMAVADVNGALVG 240 Query: 261 GASLKASDFLAIAAGC 276 GASLKA DFLAIAAGC Sbjct: 241 GASLKAGDFLAIAAGC 256 >ref|YP_577011.1| triosephosphate isomerase [Nitrobacter hamburgensis X14] gb|ABE62551.1| triosephosphate isomerase [Nitrobacter hamburgensis X14] Length = 250 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 192/243 (79%), Positives = 210/243 (86%) Query: 31 IRPLIAGNWKMNGLKSSFVEFDAMLAGAGDVAGKADLLVCPPATLVGAFADKARGSKVAV 90 +RPLIAGNWKMNGLK+S E M+AGAG A KADLL+CPPATLV AFA +GS + + Sbjct: 4 LRPLIAGNWKMNGLKASASELGQMIAGAGGPAQKADLLICPPATLVLAFAGAVQGSPLRI 63 Query: 91 GAQDCHPKASGAHTGDLSAEMFKDLGAVAIIVGHSERRADHGETDALIRQKAEAAWRAHL 150 GAQDCHP SGAHTGD SAEM D GA AIIVGHSERRADHGETDAL+RQKAEAAWRA L Sbjct: 64 GAQDCHPNPSGAHTGDTSAEMLADSGATAIIVGHSERRADHGETDALVRQKAEAAWRAAL 123 Query: 151 TAIVCIGETREQRDAGKTLDVCGTQLAGSLPDGSTAANLVVAYEPVWAIGTGLTPTAKDV 210 AIVC+GET++QRDAG+TL+V G QLAGSLPDG+TAANLVVAYEPVWAIGTG TPT KDV Sbjct: 124 IAIVCVGETQDQRDAGQTLEVVGRQLAGSLPDGATAANLVVAYEPVWAIGTGRTPTPKDV 183 Query: 211 EEVHRFIRGQLTDRFKGEGNRIRILYGGSVKPSNAAELMAVANVNGALVGGASLKASDFL 270 ++VH FIR QLT RF GEG RIRILYGGSVKPSNAAELMAV NVNGAL+GGASLKA+DFL Sbjct: 184 QDVHGFIRDQLTQRFSGEGARIRILYGGSVKPSNAAELMAVPNVNGALIGGASLKATDFL 243 Query: 271 AIA 273 AIA Sbjct: 244 AIA 246