BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0052.0031.p         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08629704.1| CTP synthase [Bradyrhizobiaceae bacterium SG-...   276   6e-72
ref|ZP_06889163.1| CTP synthase [Methylosinus trichosporium OB3b...   274   1e-71
ref|ZP_07028163.1| CTP synthase [Afipia sp. 1NLS2] >gi|298589949...   273   5e-71
ref|ZP_08073514.1| CTP synthase [Methylocystis sp. ATCC 49242] >...   272   6e-71
ref|YP_002289278.1| CTP synthase [Oligotropha carboxidovorans OM...   272   6e-71

>ref|ZP_08629704.1| CTP synthase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07559.1| CTP synthase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 543

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 132/159 (83%), Positives = 144/159 (90%), Gaps = 3/159 (1%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           M RYIFITGGVVSSLGKGLASAALGA+LQ+RGYKVRLRKLDPYLNLDPGTMSPYQHGEVF
Sbjct: 1   MTRYIFITGGVVSSLGKGLASAALGAVLQSRGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGRPATK DNITTGRIYQDI++KERRGDYLGAT+QV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGRPATKQDNITTGRIYQDILNKERRGDYLGATVQVIPHVTN 120

Query: 121 AIKEFVLDGNDEYDFVLVEIGDGGMADDVISIGHNFEAV 159
           AIKEF+L GN+ YDFVL E+  GG   D+  +   FEA+
Sbjct: 121 AIKEFILTGNEGYDFVLCEV--GGTVGDIEGLPF-FEAI 156


>ref|ZP_06889163.1| CTP synthase [Methylosinus trichosporium OB3b]
 gb|EFH02389.1| CTP synthase [Methylosinus trichosporium OB3b]
          Length = 542

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/159 (83%), Positives = 142/159 (89%), Gaps = 3/159 (1%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARYIFITGGVVSSLGKGLASA LGALLQARGY VRLRKLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MARYIFITGGVVSSLGKGLASAVLGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGRPA K DN+TTGRIYQDII+KERRGDYLGATIQV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGRPACKQDNVTTGRIYQDIIAKERRGDYLGATIQVIPHVTN 120

Query: 121 AIKEFVLDGNDEYDFVLVEIGDGGMADDVISIGHNFEAV 159
           AIKEF+L+GND  DF L+EI  GG   D+  +   FEA+
Sbjct: 121 AIKEFILEGNDHVDFALIEI--GGTVGDIEGLPF-FEAI 156


>ref|ZP_07028163.1| CTP synthase [Afipia sp. 1NLS2]
 gb|EFI50153.1| CTP synthase [Afipia sp. 1NLS2]
          Length = 543

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 131/159 (82%), Positives = 145/159 (91%), Gaps = 3/159 (1%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARYIFITGGVVSSLGKGLASAALGA+LQ+RGYKVRLRKLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MARYIFITGGVVSSLGKGLASAALGAVLQSRGYKVRLRKLDPYLNVDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGRPA KADNITTGRIYQ+I++KERRGDYLGAT+QV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGRPACKADNITTGRIYQEILAKERRGDYLGATVQVIPHVTN 120

Query: 121 AIKEFVLDGNDEYDFVLVEIGDGGMADDVISIGHNFEAV 159
           AIK+FVL GN+ YDFVL E+  GG   D+  +   FEA+
Sbjct: 121 AIKDFVLTGNEGYDFVLCEV--GGTVGDIEGLPF-FEAI 156


>ref|ZP_08073514.1| CTP synthase [Methylocystis sp. ATCC 49242]
 gb|EFX98773.1| CTP synthase [Methylocystis sp. ATCC 49242]
          Length = 542

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 131/159 (82%), Positives = 143/159 (89%), Gaps = 3/159 (1%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARYIFITGGVVSSLGKGLASA LGALLQARGY VRLRKLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MARYIFITGGVVSSLGKGLASAVLGALLQARGYTVRLRKLDPYLNIDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGRPA++ DN+TTGRIYQDII+KERRGDYLGATIQV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGRPASRQDNVTTGRIYQDIINKERRGDYLGATIQVIPHVTN 120

Query: 121 AIKEFVLDGNDEYDFVLVEIGDGGMADDVISIGHNFEAV 159
           AIKEFVL+GN+  DF L+EI  GG   D+  +   FEA+
Sbjct: 121 AIKEFVLEGNENVDFALIEI--GGTVGDIEGLPF-FEAI 156


>ref|YP_002289278.1| CTP synthase [Oligotropha carboxidovorans OM5]
 ref|YP_004632689.1| CTP synthase PyrG [Oligotropha carboxidovorans OM5]
 gb|ACI93413.1| CTP synthase [Oligotropha carboxidovorans OM5]
 gb|AEI02872.1| CTP synthase PyrG [Oligotropha carboxidovorans OM4]
 gb|AEI06448.1| CTP synthase PyrG [Oligotropha carboxidovorans OM5]
          Length = 542

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 131/159 (82%), Positives = 145/159 (91%), Gaps = 3/159 (1%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARYIFITGGVVSSLGKGLASAALGA+LQARGYKVRLRKLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MARYIFITGGVVSSLGKGLASAALGAVLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGRPA KADNITTGRIYQ+I++KERRGDYLGAT+QV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGRPACKADNITTGRIYQEILAKERRGDYLGATVQVIPHVTN 120

Query: 121 AIKEFVLDGNDEYDFVLVEIGDGGMADDVISIGHNFEAV 159
           AIK+FVL GN+ +DFVL E+  GG   D+  +   FEA+
Sbjct: 121 AIKDFVLTGNEGFDFVLCEV--GGTVGDIEGLPF-FEAI 156