BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0052.0014.p         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_487760.1| MaoC-like dehydratase [Rhodopseudomonas palustr...   247   5e-64
ref|NP_774078.1| hypothetical protein bll7438 [Bradyrhizobium ja...   246   1e-63
ref|YP_571117.1| MaoC-like dehydratase [Rhodopseudomonas palustr...   246   1e-63
ref|YP_001207879.1| hypothetical protein BRADO6010 [Bradyrhizobi...   243   5e-63
ref|YP_001237885.1| hypothetical protein BBta_1771 [Bradyrhizobi...   240   4e-62

>ref|YP_487760.1| MaoC-like dehydratase [Rhodopseudomonas palustris HaA2]
 gb|ABD08849.1| MaoC-like dehydratase [Rhodopseudomonas palustris HaA2]
          Length = 156

 Score =  247 bits (630), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 116/152 (76%), Positives = 133/152 (87%)

Query: 1   MTTLTFEDFKPGRFGTFGPRHVSREEILAFAAEFDPQPMHLDEEAAKKSMLRGLSGSGWH 60
           MT L+FEDF PG FG FGPR V+REEI+AFAAEFDPQPMHLDE AA  SML+GLSGSGWH
Sbjct: 1   MTLLSFEDFPPGHFGRFGPRRVTREEIVAFAAEFDPQPMHLDERAAAASMLQGLSGSGWH 60

Query: 61  LGSLMMRMLFDGFIGRTASLGAPGVNEMRWVAPLRPGDDLTLDVDVVEARVSKSRPETGI 120
           L SLMMRM++DGFI  TASLG+PGVNEMRW+APLRPGDDLT++VDV+EARVS SRPETGI
Sbjct: 61  LSSLMMRMMYDGFIKDTASLGSPGVNEMRWMAPLRPGDDLTIEVDVIEARVSNSRPETGI 120

Query: 121 VTFKGTIRNARGEMLCEMEAPIMISRRDAASA 152
           VTFK  +RN +G+MLCEM +PI+I RR A +A
Sbjct: 121 VTFKCHVRNGKGQMLCEMVSPIIIRRRVAVAA 152


>ref|NP_774078.1| hypothetical protein bll7438 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52703.1| bll7438 [Bradyrhizobium japonicum USDA 110]
          Length = 163

 Score =  246 bits (627), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 116/148 (78%), Positives = 132/148 (89%)

Query: 3   TLTFEDFKPGRFGTFGPRHVSREEILAFAAEFDPQPMHLDEEAAKKSMLRGLSGSGWHLG 62
           TLTFEDF PGRFGTFGPRHV+R+EILAFAAEFDPQPMHLDE+AA KSMLRGLSGSGWHL 
Sbjct: 15  TLTFEDFPPGRFGTFGPRHVTRDEILAFAAEFDPQPMHLDEDAASKSMLRGLSGSGWHLC 74

Query: 63  SLMMRMLFDGFIGRTASLGAPGVNEMRWVAPLRPGDDLTLDVDVVEARVSKSRPETGIVT 122
           SLMMRM+ DGFI R ASLG+PGV+E+RW++PLRPGDDL LDVDV+EAR SKSRP  GIV 
Sbjct: 75  SLMMRMMADGFITRAASLGSPGVDEVRWLSPLRPGDDLMLDVDVMEARASKSRPGLGIVK 134

Query: 123 FKGTIRNARGEMLCEMEAPIMISRRDAA 150
           FK T+RNA G++LCEM +PI+I RR+ A
Sbjct: 135 FKCTVRNAAGQVLCEMTSPILIERREGA 162


>ref|YP_571117.1| MaoC-like dehydratase [Rhodopseudomonas palustris BisB5]
 gb|ABE41216.1| MaoC-like dehydratase [Rhodopseudomonas palustris BisB5]
          Length = 155

 Score =  246 bits (627), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/151 (75%), Positives = 131/151 (86%)

Query: 1   MTTLTFEDFKPGRFGTFGPRHVSREEILAFAAEFDPQPMHLDEEAAKKSMLRGLSGSGWH 60
           MT LTFEDF PG FG FGPR V+REEI AFAAEFDPQPMHLDE AA  SML+GLSGSGWH
Sbjct: 1   MTLLTFEDFPPGHFGHFGPRRVTREEITAFAAEFDPQPMHLDERAAASSMLKGLSGSGWH 60

Query: 61  LGSLMMRMLFDGFIGRTASLGAPGVNEMRWVAPLRPGDDLTLDVDVVEARVSKSRPETGI 120
           L S+MMRM++DG+I  TASLG+PGVNEMRW+AP RPGDDLT+DV+VVEARVS SRP+TGI
Sbjct: 61  LCSIMMRMMYDGYIKNTASLGSPGVNEMRWMAPFRPGDDLTIDVEVVEARVSNSRPDTGI 120

Query: 121 VTFKGTIRNARGEMLCEMEAPIMISRRDAAS 151
           VTFK  +RN RG+MLCEM +PI+I RR+A +
Sbjct: 121 VTFKCYVRNGRGQMLCEMVSPIIIRRREAVA 151


>ref|YP_001207879.1| hypothetical protein BRADO6010 [Bradyrhizobium sp. ORS 278]
 emb|CAL79664.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 168

 Score =  243 bits (621), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 113/148 (76%), Positives = 134/148 (90%)

Query: 3   TLTFEDFKPGRFGTFGPRHVSREEILAFAAEFDPQPMHLDEEAAKKSMLRGLSGSGWHLG 62
           TLTFEDF PG FG+FGPRHV+R+EI+AFA+EFDPQPMH+DE+AAK+SMLRGLSGSGWHL 
Sbjct: 20  TLTFEDFPPGPFGSFGPRHVTRDEIIAFASEFDPQPMHVDEDAAKQSMLRGLSGSGWHLC 79

Query: 63  SLMMRMLFDGFIGRTASLGAPGVNEMRWVAPLRPGDDLTLDVDVVEARVSKSRPETGIVT 122
           S+MMRM+FDGFIGRTASLG+PGVNE+RW++PLRP D L LDV+VVEARVS+SRP TGIVT
Sbjct: 80  SVMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPDDALMLDVEVVEARVSRSRPATGIVT 139

Query: 123 FKGTIRNARGEMLCEMEAPIMISRRDAA 150
           FK ++RNA GE LCEM +PI++ RR  A
Sbjct: 140 FKCSVRNAAGEKLCEMVSPIIVERRGEA 167


>ref|YP_001237885.1| hypothetical protein BBta_1771 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33979.1| hypothetical protein BBta_1771 [Bradyrhizobium sp. BTAi1]
          Length = 153

 Score =  240 bits (613), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 132/148 (89%)

Query: 3   TLTFEDFKPGRFGTFGPRHVSREEILAFAAEFDPQPMHLDEEAAKKSMLRGLSGSGWHLG 62
           TLTFEDF  G FG+FGPR VSR+EI+AFA+EFDPQPMHLDE+AA +SML+GLSGSGWHL 
Sbjct: 2   TLTFEDFPQGHFGSFGPRFVSRDEIIAFASEFDPQPMHLDEQAALQSMLKGLSGSGWHLC 61

Query: 63  SLMMRMLFDGFIGRTASLGAPGVNEMRWVAPLRPGDDLTLDVDVVEARVSKSRPETGIVT 122
           SLMMRM+FDGFIGRTASLG+PGVNE+RW++PLRPGD+L LDV+VVEARVS+SRP TGIVT
Sbjct: 62  SLMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPGDELMLDVEVVEARVSQSRPSTGIVT 121

Query: 123 FKGTIRNARGEMLCEMEAPIMISRRDAA 150
           FK ++ N  GE LCEM +PI++ RRD +
Sbjct: 122 FKCSVSNKSGETLCEMVSPIIVERRDGS 149