BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0047.p (245 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773630.1| hypothetical protein blr6990 [Bradyrhizobium ja... 317 1e-84 ref|NP_773672.1| cyclic NTP-binding protein [Bradyrhizobium japo... 243 2e-62 ref|NP_772194.1| hypothetical protein blr5554 [Bradyrhizobium ja... 237 1e-60 ref|YP_001683072.1| Crp/FNR family transcriptional regulator [Ca... 163 2e-38 ref|YP_001866002.1| cyclic nucleotide-binding protein [Nostoc pu... 154 1e-35 >ref|NP_773630.1| hypothetical protein blr6990 [Bradyrhizobium japonicum USDA 110] dbj|BAC52255.1| blr6990 [Bradyrhizobium japonicum USDA 110] Length = 247 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 156/226 (69%), Positives = 187/226 (82%) Query: 1 LSPADLDLLRPELETVALEQDAVLARAGDEIDYVFFPHSGAILLMIDMADGHTVATGVVG 60 L ADLDLL P+LE VAL++D+V++RAGD+ ++V FPHSGAI +MIDMA+G TVA+ +G Sbjct: 15 LPAADLDLLAPDLEMVALDRDSVVSRAGDQTEHVLFPHSGAISVMIDMANGQTVASAAIG 74 Query: 61 CEGAVGSLSVLGASPSGITAVVRAAGTASRVPAARFHAAFGRSPGIRQAIQKHVRSMLIQ 120 EGAVG+LSVLG SP+ +TA+VRAAGTASR+PA+RFHAAF RSP IR A+Q H ++MLIQ Sbjct: 75 REGAVGTLSVLGPSPAAVTAIVRAAGTASRIPASRFHAAFSRSPAIRHAVQIHFKAMLIQ 134 Query: 121 FQLGSACNALHPVEARMARWLLQLRDRVDSDVLPLTQHALSQILGVRRTTVTLLMGNLRK 180 Q+G ACNALH V+ARMARWLL LRDRVD DVLPLTQ ALSQILGVRRTTVTLLM NLR Sbjct: 135 LQIGGACNALHSVQARMARWLLHLRDRVDHDVLPLTQEALSQILGVRRTTVTLLMRNLRA 194 Query: 181 RGAIRSDQRGQIEIDRARLLAAACECHRVMRLEAEEIFSGDKVRTR 226 GAI S++RG+IEID +RL A ACEC MRLE E IFS + ++R Sbjct: 195 SGAIISERRGEIEIDPSRLAAVACECRDTMRLEIEGIFSMNATQSR 240 >ref|NP_773672.1| cyclic NTP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52297.1| bll7032 [Bradyrhizobium japonicum USDA 110] Length = 274 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 129/218 (59%), Positives = 162/218 (74%) Query: 1 LSPADLDLLRPELETVALEQDAVLARAGDEIDYVFFPHSGAILLMIDMADGHTVATGVVG 60 L PADL LL P + V+ E D VL R+GDE+D VFFPHSGAI M+DM DG TVAT ++G Sbjct: 25 LPPADLGLLTPHFQKVSFEPDTVLVRSGDELDPVFFPHSGAIAFMLDMPDGQTVATTLIG 84 Query: 61 CEGAVGSLSVLGASPSGITAVVRAAGTASRVPAARFHAAFGRSPGIRQAIQKHVRSMLIQ 120 EGA+ S S LG S S +TAV R AGTAS++ AARF AA+ RS IR +Q HVR++L+Q Sbjct: 85 REGALASFSALGPSLSSVTAVARVAGTASQISAARFRAAYARSEAIRNVVQVHVRALLLQ 144 Query: 121 FQLGSACNALHPVEARMARWLLQLRDRVDSDVLPLTQHALSQILGVRRTTVTLLMGNLRK 180 Q +ACNALH V+ RMARWLLQL DRV SD+LP+TQ AL+Q+LGVRRTT TL M LR Sbjct: 145 LQHVAACNALHLVDGRMARWLLQLHDRVPSDLLPVTQEALAQLLGVRRTTATLTMSKLRA 204 Query: 181 RGAIRSDQRGQIEIDRARLLAAACECHRVMRLEAEEIF 218 GA+ SD+RG +EIDRARL AC+C+ +M+ + + ++ Sbjct: 205 AGAVPSDRRGFVEIDRARLERVACDCYALMQDKIDRMY 242 >ref|NP_772194.1| hypothetical protein blr5554 [Bradyrhizobium japonicum USDA 110] dbj|BAC50819.1| blr5554 [Bradyrhizobium japonicum USDA 110] Length = 263 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 128/248 (51%), Positives = 165/248 (66%), Gaps = 5/248 (2%) Query: 1 LSPADLDLLRPELETVALEQDAVLARAGDEIDYVFFPHSGAILLMIDMADGHTVATGVVG 60 L PAD LL P L V L DAVL R+GD I++++FP SGAI L++++ +G T AT V+G Sbjct: 16 LPPADFALLAPHLRKVPLLHDAVLVRSGDRIEHLYFPCSGAIALIMELPNGQTAATAVIG 75 Query: 61 CEGAVGSLSVLGASPSGITAVVRAAGTASRVPAARFHAAFGRSPGIRQAIQKHVRSMLIQ 120 +GAVG ++ LG S +TAVVR AGTA ++ ARF AA RSP I A+Q R+M+ Q Sbjct: 76 NDGAVGLMTALGPVRSPLTAVVRVAGTALQISPARFQAALERSPAIANAVQIVTRAMMTQ 135 Query: 121 FQLGSACNALHPVEARMARWLLQLRDRVD-SDVLPLTQHALSQILGVRRTTVTLLMGNLR 179 F +ACNALH VEAR+ARWLL + DR D D+LPLTQ LS++LGVRRTTVT ++ LR Sbjct: 136 FLHVAACNALHSVEARLARWLLHIHDRTDGGDILPLTQETLSELLGVRRTTVTHVVSALR 195 Query: 180 KRGAIRSDQRGQIEIDRARLLAAACECHRVMRLEAEEIFSGDKVRTRGMAPAND----PR 235 AI+S++RGQ+EIDR RL ACEC++VM + I S D VR APA + P Sbjct: 196 ASRAIKSNRRGQLEIDRQRLEVVACECYKVMSRRIDRIVSQDAVRLLHAAPARNGCPPPD 255 Query: 236 IPEIEADD 243 P + D Sbjct: 256 FPFAKTDS 263 >ref|YP_001683072.1| Crp/FNR family transcriptional regulator [Caulobacter sp. K31] gb|ABZ70574.1| transcriptional regulator, Crp/Fnr family [Caulobacter sp. K31] Length = 231 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 132/219 (60%), Gaps = 2/219 (0%) Query: 1 LSPADLDLLRPELETVALEQDAVLARAGDEIDYVFFPHSGAILLMIDMADGHTVATGVVG 60 L PAD LL + LE+ + GD ++ V+FPH I LM M +G + + VG Sbjct: 9 LPPADFALLSAHISHQELERGRHIYDPGDSMEAVYFPHDCVISLMTLMENGAAIESAPVG 68 Query: 61 CEGAVGSLSVLGASPSGITAVVRAAGTASRVPAARFHAAFGRSPGIRQAIQKHVRSMLIQ 120 EGA+G ++ +G S + A+V+A G ASR+ AA H A+ RS +R + +H ++ Sbjct: 69 REGALGLMAAVGPRQSLVRAIVQAPGNASRISAAALHDAWTRSAALRDLVDRHNEALFGH 128 Query: 121 FQLGSACNALHPVEARMARWLLQLRDRVDSDVLPLTQHALSQILGVRRTTVTLLMGNLRK 180 ACNALH VEAR RWLL RDR+DSD + LTQ L+ +LGV+RTTVT G+L+ Sbjct: 129 TIQSVACNALHGVEARFCRWLLSCRDRIDSDTINLTQEFLADMLGVQRTTVTAAAGSLQA 188 Query: 181 RGAIRSDQRGQIEI-DRARLLAAACECHRVMRLEAEEIF 218 +G IR +RG ++I DR+ L A+ACEC+ V+R E + Sbjct: 189 KGLIRY-RRGVVDILDRSGLEASACECYAVVRRGYERLL 226 >ref|YP_001866002.1| cyclic nucleotide-binding protein [Nostoc punctiforme PCC 73102] gb|ACC81059.1| cyclic nucleotide-binding protein [Nostoc punctiforme PCC 73102] Length = 243 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 126/227 (55%), Gaps = 2/227 (0%) Query: 1 LSPADLDLLRPELETVALEQDAVLARAGDEIDYVFFPHSGAILLMIDMADGHTVATGVVG 60 L D + L P L+ V+L V+ G+ I V+FP + + ++ M DG TV G+V Sbjct: 17 LPTNDYERLIPHLKLVSLPTRQVIYEPGEPIKQVYFPQNAVVSIVTGMKDGSTVEVGIVS 76 Query: 61 CEGAVGSLSVLGASPSGITAVVRAAGTASRVPAARFHAAFGRSPGIRQAIQKHVRSMLIQ 120 EG VG +LG S + A V+ AG+ ++ A F R I+ + +++R+ + Sbjct: 77 NEGMVGIPVILGGSTTTTKAFVQVAGSGVQIDADVLRTEFNRGGAIQNLLLRYIRATYTE 136 Query: 121 FQLGSACNALHPVEARMARWLLQLRDRVDSDVLPLTQHALSQILGVRRTTVTLLMGNLRK 180 G ACN LH +E R+ARWLL + DR++S+ PLTQ ++Q+LGVRR+ VT+ L + Sbjct: 137 LTQGCACNRLHTLEERLARWLLTVSDRLESEEFPLTQEFIAQMLGVRRSGVTVAASALSR 196 Query: 181 RGAIRSDQRGQIEI-DRARLLAAACECHRVMRLEAEEIFSGDKVRTR 226 G I S QRGQI I +R L +CEC+RV++ E + R R Sbjct: 197 AGMI-SYQRGQINILNREDLEETSCECYRVIQNEFARLLKNQPKRDR 242