BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0039.p (318 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203517.1| Fis family transcriptional regulator [Bradyr... 469 e-130 ref|YP_001242518.1| Fis family transcriptional regulator [Bradyr... 432 e-119 ref|NP_107106.1| transcriptional regulator [Mesorhizobium loti M... 365 4e-99 ref|ZP_04679374.1| Fis family transcriptional regulator [Ochroba... 362 3e-98 ref|YP_004614520.1| Fis family transcriptional regulator [Mesorh... 362 3e-98 >ref|YP_001203517.1| Fis family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL75280.1| putative transcriptional regulatory protein, Fis family [Bradyrhizobium sp. ORS 278] Length = 320 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 238/320 (74%), Positives = 277/320 (86%), Gaps = 2/320 (0%) Query: 1 MSRSPGVMHTDKVLDVLAGGG-APSDLSASWRRSGHLHALDPASRLPSHRLSQADIAXAQ 59 M RSPG H+D+VLDV+A G A S L+ASWRRSGHLHALDPA+ PS RL+ A+IA A+ Sbjct: 1 MGRSPGKSHSDRVLDVVAKGAPAVSALAASWRRSGHLHALDPATHAPSCRLTAAEIAEAR 60 Query: 60 QRLGGFLKVAQSTLDRLFLAVGGVGCSVLLADRDGVVVDRRGAGADDATFDAWGLWTGAV 119 +RLG L +AQ++LDRLFLAVGGVGCSVLLAD DG VVDRRGA DD+TFD+WGLW GAV Sbjct: 61 ERLGRLLAIAQASLDRLFLAVGGVGCSVLLADADGTVVDRRGARGDDSTFDSWGLWIGAV 120 Query: 120 WSEKYEGTNGIGTCIVEKRPLSIDREQHFFTRNSGLFCTTAPIFDEHGELAAALDVSSCR 179 WSE++EGTN IGTC+VEKRPL+IDR+QH+ TRN+ LFCTTAPIFDEHG+L AALDVSSCR Sbjct: 121 WSERHEGTNAIGTCLVEKRPLTIDRDQHYLTRNARLFCTTAPIFDEHGQLKAALDVSSCR 180 Query: 180 ADLTGGFSRLIATTVTDAARTIEAENFRRAFPDARILLTPKSERAVNSLLAVDRDDLVIG 239 ADLT GF RLIATTV DAAR IEAENFR+AFP ARI+LTP SER +NS+LAVD +DLV+G Sbjct: 181 ADLTEGFGRLIATTVADAARLIEAENFRQAFPHARIVLTPDSERDINSMLAVDGNDLVVG 240 Query: 240 ATRAARRALGLNAASLARPLPAADLIGETRDAG-DLAAAERAALQRALARAGGNVSKAAR 298 ATRAARRALGL+A++LARP+PA DLI AG D+ AAERA L+RALARAGGNVS+AA+ Sbjct: 241 ATRAARRALGLSASALARPVPAGDLIKGVPAAGDDIDAAERAVLKRALARAGGNVSRAAK 300 Query: 299 DLDMSRATLHRKLKQLGLHR 318 +LDMSRATLHRK+K+LGL R Sbjct: 301 ELDMSRATLHRKMKRLGLER 320 >ref|YP_001242518.1| Fis family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ38612.1| transcriptional regulator [Bradyrhizobium sp. BTAi1] Length = 349 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 230/349 (65%), Positives = 273/349 (78%), Gaps = 31/349 (8%) Query: 1 MSRSPGVMHTDKVLDVLAGGGA--------PSDLS----------------------ASW 30 M RSP H D+VLD + G P D + ASW Sbjct: 1 MGRSPESAHADRVLDTVVKGDPRKADPKADPKDKAEPNHDSKDDPKNAPAAAVSALAASW 60 Query: 31 RRSGHLHALDPASRLPSHRLSQADIAXAQQRLGGFLKVAQSTLDRLFLAVGGVGCSVLLA 90 RRSG LHALDPA+ PS RL+ A+IA A++RLG L +AQ++L+RLFLAVGGVGCSVLLA Sbjct: 61 RRSGQLHALDPATHAPSCRLTAAEIAAARERLGRLLAIAQASLERLFLAVGGVGCSVLLA 120 Query: 91 DRDGVVVDRRGAGADDATFDAWGLWTGAVWSEKYEGTNGIGTCIVEKRPLSIDREQHFFT 150 D +G+V+DRRGA DD+TF++WGLWTGAVWSE++EGTN IGTC+VEKRPL+IDR+QH+ Sbjct: 121 DAEGIVIDRRGARGDDSTFESWGLWTGAVWSERHEGTNAIGTCLVEKRPLTIDRDQHYLA 180 Query: 151 RNSGLFCTTAPIFDEHGELAAALDVSSCRADLTGGFSRLIATTVTDAARTIEAENFRRAF 210 RN+ LFCTTAPIFDEHG+L AALDVSSCRADLT GF RLIATTV DAAR IEAENFR+AF Sbjct: 181 RNTRLFCTTAPIFDEHGQLKAALDVSSCRADLTEGFGRLIATTVADAARMIEAENFRQAF 240 Query: 211 PDARILLTPKSERAVNSLLAVDRDDLVIGATRAARRALGLNAASLARPLPAADLIGETRD 270 P ARI+LTP SER +NSLLAVDR+DLVIGATR+ARRALGL+A++L+RP+PA DLI R Sbjct: 241 PHARIVLTPDSEREINSLLAVDRNDLVIGATRSARRALGLSASALSRPVPAGDLIKGARA 300 Query: 271 AG-DLAAAERAALQRALARAGGNVSKAARDLDMSRATLHRKLKQLGLHR 318 G D+ AAERA L+RALARAGGNVSKAA++LD+SRATLHRK+K+LGL R Sbjct: 301 EGDDIDAAERAVLKRALARAGGNVSKAAKELDLSRATLHRKMKRLGLER 349 >ref|NP_107106.1| transcriptional regulator [Mesorhizobium loti MAFF303099] dbj|BAB52892.1| transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 320 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 186/293 (63%), Positives = 226/293 (77%), Gaps = 1/293 (0%) Query: 26 LSASWRRSGHLHALDPASRLPSHRLSQADIAXAQQRLGGFLKVAQSTLDRLFLAVGGVGC 85 L ASWRRS +LH LDPA R P L++ ++ A+QR+ ++ AQS+LDRL+LAVGGVGC Sbjct: 27 LVASWRRSCNLHRLDPADRSPPRYLTETELGRARQRIEPLVRAAQSSLDRLYLAVGGVGC 86 Query: 86 SVLLADRDGVVVDRRGAGADDATFDAWGLWTGAVWSEKYEGTNGIGTCIVEKRPLSIDRE 145 VLLADRDGV V+RRGA DD TF +WGLWTG+VW+E+ EGTNGIGTC+VE+R L+I R+ Sbjct: 87 CVLLADRDGVPVERRGAPVDDETFHSWGLWTGSVWNEQSEGTNGIGTCLVEQRALTIHRD 146 Query: 146 QHFFTRNSGLFCTTAPIFDEHGELAAALDVSSCRADLTGGFSRLIATTVTDAARTIEAEN 205 QHF TRN+GL CTTAPI+D G+L AALDVSSCRADLT F+ LI+ V DAAR IEAEN Sbjct: 147 QHFHTRNTGLSCTTAPIYDHQGDLVAALDVSSCRADLTEAFANLISLAVVDAARRIEAEN 206 Query: 206 FRRAFPDARILLTPKSERAVNSLLAVDRDDLVIGATRAARRALGLNAASLARPLPAADLI 265 F+ AFP ARILL P +++ +L+AVD DDLV+GATR AR ALG+ L +P+PAADL+ Sbjct: 207 FKMAFPKARILLAPVADKGSGALIAVDSDDLVVGATRQARIALGITQQCLDKPMPAADLL 266 Query: 266 GETRDAGDLAAAERAALQRALARAGGNVSKAARDLDMSRATLHRKLKQLGLHR 318 G T LA AER LQRALARA GNVS AA+ L +SRATLHRKL +L H+ Sbjct: 267 GWT-GPEILAEAERGVLQRALARADGNVSAAAQALGISRATLHRKLNRLDAHK 318 >ref|ZP_04679374.1| Fis family transcriptional regulator [Ochrobactrum intermedium LMG 3301] gb|EEQ94880.1| Fis family transcriptional regulator [Ochrobactrum intermedium LMG 3301] Length = 323 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 192/313 (61%), Positives = 230/313 (73%), Gaps = 3/313 (0%) Query: 9 HTDKVLDVL--AGGGAPSDLSASWRRSGHLHALDPASRLPSHRLSQADIAXAQQRLGGFL 66 H D++ + AGG A S L ASWRRS LH LDPA LS + A QR+ + Sbjct: 9 HADRIQSAITTAGGAARSALVASWRRSAELHGLDPAEPGSVRTLSDGEFRTAHQRIERLV 68 Query: 67 KVAQSTLDRLFLAVGGVGCSVLLADRDGVVVDRRGAGADDATFDAWGLWTGAVWSEKYEG 126 +AQ+++DRL+LAVGGVGC VLLAD +GV V+RRGA DD TF WGLWTGAVWSE+ EG Sbjct: 69 SIAQASMDRLYLAVGGVGCCVLLADSEGVPVERRGAPGDDDTFYRWGLWTGAVWSEQSEG 128 Query: 127 TNGIGTCIVEKRPLSIDREQHFFTRNSGLFCTTAPIFDEHGELAAALDVSSCRADLTGGF 186 TNGIGTCIVE+RPL+I R+QHF TRN GL CT API D G L AALDVSSCRADLT F Sbjct: 129 TNGIGTCIVEQRPLTIHRDQHFHTRNIGLSCTVAPIHDHQGRLMAALDVSSCRADLTEAF 188 Query: 187 SRLIATTVTDAARTIEAENFRRAFPDARILLTPKSERAVNSLLAVDRDDLVIGATRAARR 246 ++LI+ V DAAR IEAENFR+AFPDARI+L P +R +L+AVD+DDLV+GATRAAR Sbjct: 189 AQLISVAVIDAARRIEAENFRQAFPDARIMLAPSPDRTGGALIAVDKDDLVVGATRAARL 248 Query: 247 ALGLNAASLARPLPAADLIGETRDA-GDLAAAERAALQRALARAGGNVSKAARDLDMSRA 305 AL L+ +LA PLPAADL+G D D+A +ER + RALARA GN+S AA+ L +SRA Sbjct: 249 ALELDDDALASPLPAADLLGTPADPREDMAESERGVILRALARAEGNISFAAQLLGISRA 308 Query: 306 TLHRKLKQLGLHR 318 TLHRKL +L + R Sbjct: 309 TLHRKLNRLKIIR 321 >ref|YP_004614520.1| Fis family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH90426.1| transcriptional regulator, Fis family [Mesorhizobium opportunistum WSM2075] Length = 322 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 184/294 (62%), Positives = 226/294 (76%), Gaps = 1/294 (0%) Query: 26 LSASWRRSGHLHALDPASRLPSHRLSQADIAXAQQRLGGFLKVAQSTLDRLFLAVGGVGC 85 L ASWRRS +LH L+PA P H L++A++A A+QR+ L+ AQ++LDRL+LAVGGVGC Sbjct: 27 LVASWRRSSNLHRLEPADCSPPHYLTEAELAQARQRIEPLLRAAQASLDRLYLAVGGVGC 86 Query: 86 SVLLADRDGVVVDRRGAGADDATFDAWGLWTGAVWSEKYEGTNGIGTCIVEKRPLSIDRE 145 VLLADRDGV V+RRGA DD TF +WGLWTG+VW+E+ +GTNGIGTC+VE+R L+I R+ Sbjct: 87 CVLLADRDGVPVERRGAPVDDETFHSWGLWTGSVWNEESQGTNGIGTCLVERRALTIHRD 146 Query: 146 QHFFTRNSGLFCTTAPIFDEHGELAAALDVSSCRADLTGGFSRLIATTVTDAARTIEAEN 205 QHF TRN+ L CTTAPI D G L AALDVSSCRADLT F LI+ V DAAR IE+EN Sbjct: 147 QHFHTRNTLLSCTTAPIHDHEGNLVAALDVSSCRADLTEAFVNLISMAVVDAARRIESEN 206 Query: 206 FRRAFPDARILLTPKSERAVNSLLAVDRDDLVIGATRAARRALGLNAASLARPLPAADLI 265 F+ AFP ARILL P +++ +L+A+D DDLV+GATR+AR ALG+ L +P+PAADL+ Sbjct: 207 FKMAFPKARILLAPVTDKGSGALIAIDADDLVVGATRSARLALGITQQCLDKPMPAADLL 266 Query: 266 GETRDAGD-LAAAERAALQRALARAGGNVSKAARDLDMSRATLHRKLKQLGLHR 318 G LA AER ALQRALARA GNVS AA+ L +SRATLHRKL +L +HR Sbjct: 267 GWAEIGPKVLAEAERGALQRALARADGNVSAAAQALGISRATLHRKLNRLDVHR 320