BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0030.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772281.1| hypothetical protein blr5641 [Bradyrhizobium ja... 501 e-140 ref|YP_001241187.1| hypothetical protein BBta_5299 [Bradyrhizobi... 477 e-133 ref|YP_001204921.1| hypothetical protein BRADO2875 [Bradyrhizobi... 477 e-133 ref|ZP_01046588.1| hypothetical protein NB311A_18206 [Nitrobacte... 474 e-132 ref|YP_577841.1| hypothetical protein Nham_2599 [Nitrobacter ham... 471 e-131 >ref|NP_772281.1| hypothetical protein blr5641 [Bradyrhizobium japonicum USDA 110] dbj|BAC50906.1| blr5641 [Bradyrhizobium japonicum USDA 110] Length = 278 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 242/270 (89%), Positives = 254/270 (94%), Gaps = 3/270 (1%) Query: 10 KTKT---DAGNIYIGIGGWTFEPWRGVFYPEKLAQSKELSYAASKLTSIEINGTYYGSQK 66 KTKT +GNI+IG+GGWTFEPWRGVFYPEKL Q+KELSYAASKLTSIEINGTYYGSQK Sbjct: 8 KTKTVSKKSGNIFIGVGGWTFEPWRGVFYPEKLTQAKELSYAASKLTSIEINGTYYGSQK 67 Query: 67 PESFRKWASEVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYDSGVLELKDRLGPVLWQF 126 PESFRKWASEVP+GF+FS+KGPRFATNRRVLAEAGDS+KRFYDSGVLEL D LGPVLWQF Sbjct: 68 PESFRKWASEVPEGFVFSVKGPRFATNRRVLAEAGDSIKRFYDSGVLELGDHLGPVLWQF 127 Query: 127 APTKKFDGADFGKFLELLPRKLDGRALRHVVEVRHDSFCVPEFVALIREHEVPVVFAEHG 186 APTKKFDGADFGKFLELLPRKLDGRALRHVVEVRHDSFC P+FVALIRE E PVVFAEHG Sbjct: 128 APTKKFDGADFGKFLELLPRKLDGRALRHVVEVRHDSFCTPDFVALIREFETPVVFAEHG 187 Query: 187 KYPAIADVASDFVYARLQKGNDELKTCYPPKQLDAWAKRFQDWAAGSEPDDLPKVDKAAP 246 KYPAIADVA DFVYARLQKGNDE+KTCYPPKQLDAWA+RF+DWA GSEPDDLPKVDKA P Sbjct: 188 KYPAIADVAGDFVYARLQKGNDEIKTCYPPKQLDAWAQRFKDWAEGSEPDDLPKVDKAKP 247 Query: 247 KKAPRDVFAYVIHEGKVRAPAGAMELIERV 276 KK PRDVFAYVIHEGKVRAP GAMELI RV Sbjct: 248 KKEPRDVFAYVIHEGKVRAPHGAMELIARV 277 >ref|YP_001241187.1| hypothetical protein BBta_5299 [Bradyrhizobium sp. BTAi1] gb|ABQ37281.1| hypothetical protein BBta_5299 [Bradyrhizobium sp. BTAi1] Length = 274 Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust. Identities = 233/276 (84%), Positives = 245/276 (88%), Gaps = 3/276 (1%) Query: 1 VAKAPTKATKTKTDAGNIYIGIGGWTFEPWRGVFYPEKLAQSKELSYAASKLTSIEINGT 60 ++KAP +A K+ +IYIGIGGWTF PWRGVFYP++L QSKEL YAAS+LTSIEINGT Sbjct: 1 MSKAPARAAHPKS---HIYIGIGGWTFAPWRGVFYPDRLPQSKELEYAASQLTSIEINGT 57 Query: 61 YYGSQKPESFRKWASEVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYDSGVLELKDRLG 120 YYGSQKPESFRKWA EVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYD+GVLEL DRLG Sbjct: 58 YYGSQKPESFRKWAREVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYDTGVLELGDRLG 117 Query: 121 PVLWQFAPTKKFDGADFGKFLELLPRKLDGRALRHVVEVRHDSFCVPEFVALIREHEVPV 180 PVLWQFAPTKKFD ADFGKFLELLPR+LDGR LRHVVEVRHDSFCVP FV L+RE PV Sbjct: 118 PVLWQFAPTKKFDEADFGKFLELLPRELDGRQLRHVVEVRHDSFCVPGFVKLLREFATPV 177 Query: 181 VFAEHGKYPAIADVASDFVYARLQKGNDELKTCYPPKQLDAWAKRFQDWAAGSEPDDLPK 240 VFAEHGKYPAIADVA DFVY RLQKGNDELKTCYPPKQLDAWAKR Q WA G EPDDLP+ Sbjct: 178 VFAEHGKYPAIADVAGDFVYVRLQKGNDELKTCYPPKQLDAWAKRLQMWAEGGEPDDLPR 237 Query: 241 VDKAAPKKAPRDVFAYVIHEGKVRAPAGAMELIERV 276 VD K PRDVFAYVIHEGKVRAPAGAMELIERV Sbjct: 238 VDDTPANKTPRDVFAYVIHEGKVRAPAGAMELIERV 273 >ref|YP_001204921.1| hypothetical protein BRADO2875 [Bradyrhizobium sp. ORS 278] emb|CAL76684.1| conserved hypothetical protein (DUF72) [Bradyrhizobium sp. ORS 278] Length = 274 Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust. Identities = 232/276 (84%), Positives = 248/276 (89%), Gaps = 3/276 (1%) Query: 1 VAKAPTKATKTKTDAGNIYIGIGGWTFEPWRGVFYPEKLAQSKELSYAASKLTSIEINGT 60 ++KAP +A+ K+ IYIGIGGWTF PWRGVFYP+KL Q+KEL YAASKLTSIEINGT Sbjct: 1 MSKAPARASTPKS---QIYIGIGGWTFAPWRGVFYPDKLPQAKELEYAASKLTSIEINGT 57 Query: 61 YYGSQKPESFRKWASEVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYDSGVLELKDRLG 120 YYGSQKPESFRKWA EVPDGFIFSLKGPRFATNR+VLAEAGDSVKRFYD+GVLEL+DRLG Sbjct: 58 YYGSQKPESFRKWAREVPDGFIFSLKGPRFATNRKVLAEAGDSVKRFYDTGVLELRDRLG 117 Query: 121 PVLWQFAPTKKFDGADFGKFLELLPRKLDGRALRHVVEVRHDSFCVPEFVALIREHEVPV 180 PVLWQFAPTKKFD ADFGKFLELLPR +DGR LRHVVEVRHDSFCVP FV L+RE PV Sbjct: 118 PVLWQFAPTKKFDEADFGKFLELLPRDIDGRKLRHVVEVRHDSFCVPGFVKLLREFATPV 177 Query: 181 VFAEHGKYPAIADVASDFVYARLQKGNDELKTCYPPKQLDAWAKRFQDWAAGSEPDDLPK 240 V+AEHGKYPAIADVA DFVYARLQKGNDELKTCYPPKQLDAWAKR Q WA+G EP+DLP+ Sbjct: 178 VYAEHGKYPAIADVAGDFVYARLQKGNDELKTCYPPKQLDAWAKRLQLWASGGEPEDLPR 237 Query: 241 VDKAAPKKAPRDVFAYVIHEGKVRAPAGAMELIERV 276 VD KK PRDVFAYVIHEGKVRAPAGAMELIERV Sbjct: 238 VDDKPAKKTPRDVFAYVIHEGKVRAPAGAMELIERV 273 >ref|ZP_01046588.1| hypothetical protein NB311A_18206 [Nitrobacter sp. Nb-311A] gb|EAQ35424.1| hypothetical protein NB311A_18206 [Nitrobacter sp. Nb-311A] Length = 267 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 225/263 (85%), Positives = 243/263 (92%) Query: 15 AGNIYIGIGGWTFEPWRGVFYPEKLAQSKELSYAASKLTSIEINGTYYGSQKPESFRKWA 74 +GNIYIGIGGWTF PWRG+FYP+KLA +KEL+YAASKLTSIEINGTYYGSQKPESFRKWA Sbjct: 5 SGNIYIGIGGWTFPPWRGIFYPDKLAHAKELAYAASKLTSIEINGTYYGSQKPESFRKWA 64 Query: 75 SEVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYDSGVLELKDRLGPVLWQFAPTKKFDG 134 EVPDGF+FSLKGPRFATNRR LAEAGDSVKRFYDSGVLEL DRLGPVLWQFAPTK FD Sbjct: 65 REVPDGFVFSLKGPRFATNRRGLAEAGDSVKRFYDSGVLELGDRLGPVLWQFAPTKAFDE 124 Query: 135 ADFGKFLELLPRKLDGRALRHVVEVRHDSFCVPEFVALIREHEVPVVFAEHGKYPAIADV 194 ADFGKFLELLPRKL+GRALRH VEVRH SFC P F++L+R+ +VPVVFAEHGKYPAIAD+ Sbjct: 125 ADFGKFLELLPRKLEGRALRHAVEVRHHSFCTPAFISLLRQFQVPVVFAEHGKYPAIADI 184 Query: 195 ASDFVYARLQKGNDELKTCYPPKQLDAWAKRFQDWAAGSEPDDLPKVDKAAPKKAPRDVF 254 A+DFVYARLQKG+DE+KTCYPPKQLDAWAKRFQ WA G EPDDLP+VD A PKK PRDVF Sbjct: 185 AADFVYARLQKGSDEIKTCYPPKQLDAWAKRFQCWATGDEPDDLPRVDGAQPKKVPRDVF 244 Query: 255 AYVIHEGKVRAPAGAMELIERVK 277 AY+IHEGKV APAGAMELI RVK Sbjct: 245 AYMIHEGKVHAPAGAMELIARVK 267 >ref|YP_577841.1| hypothetical protein Nham_2599 [Nitrobacter hamburgensis X14] gb|ABE63381.1| protein of unknown function DUF72 [Nitrobacter hamburgensis X14] Length = 267 Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/263 (85%), Positives = 240/263 (91%) Query: 15 AGNIYIGIGGWTFEPWRGVFYPEKLAQSKELSYAASKLTSIEINGTYYGSQKPESFRKWA 74 AG IYIG+GGWTF PWRGVFYP+KL Q+KEL+YAASKLTSIEINGTYYGSQKPESFRKWA Sbjct: 5 AGKIYIGVGGWTFAPWRGVFYPDKLTQAKELAYAASKLTSIEINGTYYGSQKPESFRKWA 64 Query: 75 SEVPDGFIFSLKGPRFATNRRVLAEAGDSVKRFYDSGVLELKDRLGPVLWQFAPTKKFDG 134 EVPDGF+FSLKGPRFATNRRVLAEA DSVKRFYDSGVLEL DRLGPVLWQFAPTK FD Sbjct: 65 REVPDGFVFSLKGPRFATNRRVLAEARDSVKRFYDSGVLELGDRLGPVLWQFAPTKTFDE 124 Query: 135 ADFGKFLELLPRKLDGRALRHVVEVRHDSFCVPEFVALIREHEVPVVFAEHGKYPAIADV 194 DFGKFLELLPRKL+G LRHVVEVRHDSF P F+AL+R+ EVPVVFAEHGKYPAIAD+ Sbjct: 125 IDFGKFLELLPRKLEGHPLRHVVEVRHDSFRTPAFIALLRQFEVPVVFAEHGKYPAIADI 184 Query: 195 ASDFVYARLQKGNDELKTCYPPKQLDAWAKRFQDWAAGSEPDDLPKVDKAAPKKAPRDVF 254 A+DFVYARLQKGNDE++TCYPPKQLDAWAKRFQ WA G EPDDLP+VD A PK PRDVF Sbjct: 185 AADFVYARLQKGNDEVETCYPPKQLDAWAKRFQSWAEGGEPDDLPRVDTAKPKTTPRDVF 244 Query: 255 AYVIHEGKVRAPAGAMELIERVK 277 AYVIHEGKVRAPAGAMELI RVK Sbjct: 245 AYVIHEGKVRAPAGAMELIARVK 267